Ggra10733.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10733.t1
Unique NameGgra10733.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length128
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:8406..8787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10733Ggra10733Gracilaria gracilis GNS1m malegenetig00000200_pilon 8406..8787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10733.t1.CDS1Ggra10733.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000200_pilon 8406..8787 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10733.t1.exon1Ggra10733.t1.exon1Gracilaria gracilis GNS1m maleexontig00000200_pilon 8406..8787 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10733.t1.start1Ggra10733.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000200_pilon 8785..8787 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10733.t1Ggra10733.t1Gracilaria gracilis GNS1m malepolypeptidetig00000200_pilon 8406..8787 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10733.t1 ID=Ggra10733.t1|Name=Ggra10733.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=128bp
MGDTEAELAASAALVPTAVTPKPAPGDEVTLLVAGAEGNKTPIGKGQVAQ
IEAGGTPKYRRAMHGHALQGKPGEDVVAIWRVTVTHALDAPYPYPFKCTD
EDSIPKTLKDMNEPGFFAWDLNFMSTAX
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spliced messenger RNA

>Ggra10733.t1 ID=Ggra10733.t1|Name=Ggra10733.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=382bp|location=Sequence derived from alignment at tig00000200_pilon:8406..8787- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGAGACACGGAAGCTGAATTGGCGGCGAGCGCTGCTCTGGTTCCGAC
AGCGGTGACCCCGAAGCCTGCACCGGGCGATGAAGTCACGTTGCTCGTAG
CGGGAGCGGAAGGGAACAAAACGCCGATTGGAAAAGGTCAAGTCGCCCAA
ATCGAAGCCGGAGGAACACCAAAGTATAGGAGGGCAATGCACGGGCATGC
TCTTCAGGGAAAACCGGGTGAAGATGTAGTAGCTATTTGGCGGGTGACTG
TCACTCATGCACTTGATGCCCCTTATCCGTATCCGTTCAAGTGCACCGAT
GAAGATTCTATTCCGAAAACGTTGAAGGACATGAACGAGCCCGGCTTTTT
TGCGTGGGATCTGAACTTCATGAGTACAGCCG
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protein sequence of Ggra10733.t1

>Ggra10733.t1 ID=Ggra10733.t1|Name=Ggra10733.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=128bp
MGDTEAELAASAALVPTAVTPKPAPGDEVTLLVAGAEGNKTPIGKGQVAQ
IEAGGTPKYRRAMHGHALQGKPGEDVVAIWRVTVTHALDAPYPYPFKCTD
EDSIPKTLKDMNEPGFFAWDLNFMSTAX
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mRNA from alignment at tig00000200_pilon:8406..8787-

Legend: CDSpolypeptideexonstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10733.t1 ID=Ggra10733.t1|Name=Ggra10733.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=382bp|location=Sequence derived from alignment at tig00000200_pilon:8406..8787- (Gracilaria gracilis GNS1m male)
ATGGGAGACACGGAAGCTGAATTGGCGGCGAGCGCTGCTCTGGTTCCGAC
AGCGGTGACCCCGAAGCCTGCACCGGGCGATGAAGTCACGTTGCTCGTAG
CGGGAGCGGAAGGGAACAAAACGCCGATTGGAAAAGGTCAAGTCGCCCAA
ATCGAAGCCGGAGGAACACCAAAGTATAGGAGGGCAATGCACGGGCATGC
TCTTCAGGGAAAACCGGGTGAAGATGTAGTAGCTATTTGGCGGGTGACTG
TCACTCATGCACTTGATGCCCCTTATCCGTATCCGTTCAAGTGCACCGAT
GAAGATTCTATTCCGAAAACGTTGAAGGACATGAACGAGCCCGGCTTTTT
TGCGTGGGATCTGAACTTCATGAGTACAGCCG
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Coding sequence (CDS) from alignment at tig00000200_pilon:8406..8787-

>Ggra10733.t1 ID=Ggra10733.t1|Name=Ggra10733.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=382bp|location=Sequence derived from alignment at tig00000200_pilon:8406..8787- (Gracilaria gracilis GNS1m male)
ATGGGAGACACGGAAGCTGAATTGGCGGCGAGCGCTGCTCTGGTTCCGAC
AGCGGTGACCCCGAAGCCTGCACCGGGCGATGAAGTCACGTTGCTCGTAG
CGGGAGCGGAAGGGAACAAAACGCCGATTGGAAAAGGTCAAGTCGCCCAA
ATCGAAGCCGGAGGAACACCAAAGTATAGGAGGGCAATGCACGGGCATGC
TCTTCAGGGAAAACCGGGTGAAGATGTAGTAGCTATTTGGCGGGTGACTG
TCACTCATGCACTTGATGCCCCTTATCCGTATCCGTTCAAGTGCACCGAT
GAAGATTCTATTCCGAAAACGTTGAAGGACATGAACGAGCCCGGCTTTTT
TGCGTGGGATCTGAACTTCATGAGTACAGCCG
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