Ggra10731.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10731.t1
Unique NameGgra10731.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length422
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:1087536..1088801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10731Ggra10731Gracilaria gracilis GNS1m malegenetig00000888_pilon 1087536..1088801 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10731.t1.stop1Ggra10731.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000888_pilon 1087536..1087538 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10731.t1.CDS1Ggra10731.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000888_pilon 1087536..1088801 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10731.t1.exon1Ggra10731.t1.exon1Gracilaria gracilis GNS1m maleexontig00000888_pilon 1087536..1088801 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10731.t1.start1Ggra10731.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000888_pilon 1088799..1088801 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10731.t1Ggra10731.t1Gracilaria gracilis GNS1m malepolypeptidetig00000888_pilon 1087536..1088801 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10731.t1 ID=Ggra10731.t1|Name=Ggra10731.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=422bp
MILLITLFSLLVIAVATVLAQAPTCRDRGLFSHIACERLSLNECLSSSQF
GCVPYGCDCTLNETLSETNPCPNNEFPVKELRLSPGSPLSFRMGVNLLDN
RLNVLLLVDGSPSMAQQLPRVISELSTLANDLIFNLSAIVGVAVYAGEQS
FDTFEAYRSLQSLTTNATAVQQALQLIPSLSLRNGPRLLLRAIEDSRSAN
IGWTGFNARRIIIVVGDTPGREPACATDDFQKALDRNTLFDFVNILPTKF
SFIAASVGQPGLDSGLAKLPQCPFQPLCLLVFCERPEPAAGVPVAPGQLS
TLTSQVNGTFIADFSQAAVYNAVLNILQLSNFQPIEGLLFRDTEDAPTPV
SMDTCGDRVEVQRPELPMTLPPLSVSTFDFTVSLAENACQNGTFECSLTI
GESRNATFVFEIVSLPVKACF*
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spliced messenger RNA

>Ggra10731.t1 ID=Ggra10731.t1|Name=Ggra10731.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1266bp|location=Sequence derived from alignment at tig00000888_pilon:1087536..1088801- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATTTTGCTCATCACACTATTCTCTTTGCTTGTGATCGCGGTAGCCAC
GGTCCTCGCACAAGCCCCCACCTGTCGAGATCGTGGCCTTTTCTCTCACA
TCGCCTGCGAGCGACTTTCGTTGAACGAATGCCTCTCAAGCTCTCAATTC
GGGTGTGTTCCATACGGGTGTGACTGCACGCTCAATGAGACCTTATCCGA
GACAAACCCTTGTCCCAACAATGAGTTTCCCGTCAAGGAGCTTCGTCTCT
CCCCAGGCTCGCCGCTCAGCTTCCGCATGGGCGTCAACCTGCTCGACAAT
CGCCTTAACGTGTTACTCTTGGTGGACGGGTCTCCTTCGATGGCTCAACA
GCTACCGCGAGTGATCTCTGAGCTGTCTACGTTAGCGAACGATTTGATAT
TCAACCTTTCTGCTATCGTGGGTGTGGCTGTGTACGCCGGTGAACAATCG
TTCGATACGTTTGAGGCGTACCGATCGTTGCAGTCCTTGACGACGAACGC
AACAGCCGTGCAGCAGGCTCTCCAGCTCATACCTTCCTTGTCGCTTCGAA
ACGGCCCTCGTCTGTTGCTTCGCGCCATTGAAGATTCGCGTAGTGCCAAC
ATCGGATGGACCGGTTTCAATGCGAGACGCATCATCATCGTTGTTGGAGA
TACACCTGGTCGGGAGCCTGCTTGCGCAACGGACGACTTCCAGAAAGCTC
TTGACCGGAATACCTTGTTCGATTTCGTCAACATCCTGCCCACCAAGTTC
TCCTTCATTGCCGCCAGTGTGGGGCAACCTGGCTTGGATTCTGGCTTAGC
CAAACTACCGCAATGTCCCTTTCAACCGCTGTGCCTGCTTGTGTTCTGCG
AACGTCCGGAGCCAGCCGCAGGAGTACCAGTTGCACCGGGACAGCTCTCC
ACACTAACCAGTCAGGTGAATGGAACGTTCATTGCCGACTTCTCTCAGGC
AGCCGTTTACAACGCTGTGTTGAACATTCTTCAACTTTCGAACTTTCAAC
CAATTGAGGGACTGCTGTTTCGCGATACAGAAGATGCTCCGACGCCTGTG
AGCATGGATACATGTGGAGACCGTGTGGAGGTGCAGCGACCCGAGCTTCC
GATGACTCTCCCTCCTCTTTCGGTTTCGACGTTCGATTTTACGGTGTCTC
TTGCTGAAAACGCGTGTCAAAACGGAACCTTCGAATGTAGCTTGACTATT
GGAGAGTCGAGAAACGCCACTTTTGTATTCGAAATTGTATCTCTCCCCGT
CAAAGCATGCTTTTGA
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protein sequence of Ggra10731.t1

>Ggra10731.t1 ID=Ggra10731.t1|Name=Ggra10731.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=422bp
MILLITLFSLLVIAVATVLAQAPTCRDRGLFSHIACERLSLNECLSSSQF
GCVPYGCDCTLNETLSETNPCPNNEFPVKELRLSPGSPLSFRMGVNLLDN
RLNVLLLVDGSPSMAQQLPRVISELSTLANDLIFNLSAIVGVAVYAGEQS
FDTFEAYRSLQSLTTNATAVQQALQLIPSLSLRNGPRLLLRAIEDSRSAN
IGWTGFNARRIIIVVGDTPGREPACATDDFQKALDRNTLFDFVNILPTKF
SFIAASVGQPGLDSGLAKLPQCPFQPLCLLVFCERPEPAAGVPVAPGQLS
TLTSQVNGTFIADFSQAAVYNAVLNILQLSNFQPIEGLLFRDTEDAPTPV
SMDTCGDRVEVQRPELPMTLPPLSVSTFDFTVSLAENACQNGTFECSLTI
GESRNATFVFEIVSLPVKACF*
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mRNA from alignment at tig00000888_pilon:1087536..1088801-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10731.t1 ID=Ggra10731.t1|Name=Ggra10731.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1266bp|location=Sequence derived from alignment at tig00000888_pilon:1087536..1088801- (Gracilaria gracilis GNS1m male)
ATGATTTTGCTCATCACACTATTCTCTTTGCTTGTGATCGCGGTAGCCAC
GGTCCTCGCACAAGCCCCCACCTGTCGAGATCGTGGCCTTTTCTCTCACA
TCGCCTGCGAGCGACTTTCGTTGAACGAATGCCTCTCAAGCTCTCAATTC
GGGTGTGTTCCATACGGGTGTGACTGCACGCTCAATGAGACCTTATCCGA
GACAAACCCTTGTCCCAACAATGAGTTTCCCGTCAAGGAGCTTCGTCTCT
CCCCAGGCTCGCCGCTCAGCTTCCGCATGGGCGTCAACCTGCTCGACAAT
CGCCTTAACGTGTTACTCTTGGTGGACGGGTCTCCTTCGATGGCTCAACA
GCTACCGCGAGTGATCTCTGAGCTGTCTACGTTAGCGAACGATTTGATAT
TCAACCTTTCTGCTATCGTGGGTGTGGCTGTGTACGCCGGTGAACAATCG
TTCGATACGTTTGAGGCGTACCGATCGTTGCAGTCCTTGACGACGAACGC
AACAGCCGTGCAGCAGGCTCTCCAGCTCATACCTTCCTTGTCGCTTCGAA
ACGGCCCTCGTCTGTTGCTTCGCGCCATTGAAGATTCGCGTAGTGCCAAC
ATCGGATGGACCGGTTTCAATGCGAGACGCATCATCATCGTTGTTGGAGA
TACACCTGGTCGGGAGCCTGCTTGCGCAACGGACGACTTCCAGAAAGCTC
TTGACCGGAATACCTTGTTCGATTTCGTCAACATCCTGCCCACCAAGTTC
TCCTTCATTGCCGCCAGTGTGGGGCAACCTGGCTTGGATTCTGGCTTAGC
CAAACTACCGCAATGTCCCTTTCAACCGCTGTGCCTGCTTGTGTTCTGCG
AACGTCCGGAGCCAGCCGCAGGAGTACCAGTTGCACCGGGACAGCTCTCC
ACACTAACCAGTCAGGTGAATGGAACGTTCATTGCCGACTTCTCTCAGGC
AGCCGTTTACAACGCTGTGTTGAACATTCTTCAACTTTCGAACTTTCAAC
CAATTGAGGGACTGCTGTTTCGCGATACAGAAGATGCTCCGACGCCTGTG
AGCATGGATACATGTGGAGACCGTGTGGAGGTGCAGCGACCCGAGCTTCC
GATGACTCTCCCTCCTCTTTCGGTTTCGACGTTCGATTTTACGGTGTCTC
TTGCTGAAAACGCGTGTCAAAACGGAACCTTCGAATGTAGCTTGACTATT
GGAGAGTCGAGAAACGCCACTTTTGTATTCGAAATTGTATCTCTCCCCGT
CAAAGCATGCTTTTGA
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Coding sequence (CDS) from alignment at tig00000888_pilon:1087536..1088801-

>Ggra10731.t1 ID=Ggra10731.t1|Name=Ggra10731.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1266bp|location=Sequence derived from alignment at tig00000888_pilon:1087536..1088801- (Gracilaria gracilis GNS1m male)
ATGATTTTGCTCATCACACTATTCTCTTTGCTTGTGATCGCGGTAGCCAC
GGTCCTCGCACAAGCCCCCACCTGTCGAGATCGTGGCCTTTTCTCTCACA
TCGCCTGCGAGCGACTTTCGTTGAACGAATGCCTCTCAAGCTCTCAATTC
GGGTGTGTTCCATACGGGTGTGACTGCACGCTCAATGAGACCTTATCCGA
GACAAACCCTTGTCCCAACAATGAGTTTCCCGTCAAGGAGCTTCGTCTCT
CCCCAGGCTCGCCGCTCAGCTTCCGCATGGGCGTCAACCTGCTCGACAAT
CGCCTTAACGTGTTACTCTTGGTGGACGGGTCTCCTTCGATGGCTCAACA
GCTACCGCGAGTGATCTCTGAGCTGTCTACGTTAGCGAACGATTTGATAT
TCAACCTTTCTGCTATCGTGGGTGTGGCTGTGTACGCCGGTGAACAATCG
TTCGATACGTTTGAGGCGTACCGATCGTTGCAGTCCTTGACGACGAACGC
AACAGCCGTGCAGCAGGCTCTCCAGCTCATACCTTCCTTGTCGCTTCGAA
ACGGCCCTCGTCTGTTGCTTCGCGCCATTGAAGATTCGCGTAGTGCCAAC
ATCGGATGGACCGGTTTCAATGCGAGACGCATCATCATCGTTGTTGGAGA
TACACCTGGTCGGGAGCCTGCTTGCGCAACGGACGACTTCCAGAAAGCTC
TTGACCGGAATACCTTGTTCGATTTCGTCAACATCCTGCCCACCAAGTTC
TCCTTCATTGCCGCCAGTGTGGGGCAACCTGGCTTGGATTCTGGCTTAGC
CAAACTACCGCAATGTCCCTTTCAACCGCTGTGCCTGCTTGTGTTCTGCG
AACGTCCGGAGCCAGCCGCAGGAGTACCAGTTGCACCGGGACAGCTCTCC
ACACTAACCAGTCAGGTGAATGGAACGTTCATTGCCGACTTCTCTCAGGC
AGCCGTTTACAACGCTGTGTTGAACATTCTTCAACTTTCGAACTTTCAAC
CAATTGAGGGACTGCTGTTTCGCGATACAGAAGATGCTCCGACGCCTGTG
AGCATGGATACATGTGGAGACCGTGTGGAGGTGCAGCGACCCGAGCTTCC
GATGACTCTCCCTCCTCTTTCGGTTTCGACGTTCGATTTTACGGTGTCTC
TTGCTGAAAACGCGTGTCAAAACGGAACCTTCGAATGTAGCTTGACTATT
GGAGAGTCGAGAAACGCCACTTTTGTATTCGAAATTGTATCTCTCCCCGT
CAAAGCATGCTTTTGA
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