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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10690.t1.start1 | Ggra10690.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000888_pilon 215256..215258 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10690.t1.intron1 | Ggra10690.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000888_pilon 215694..217145 + |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10690.t1.stop1 | Ggra10690.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000888_pilon 217518..217520 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10690.t1 ID=Ggra10690.t1|Name=Ggra10690.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=271bp MDCTLENGMDSCDSRQREEPEAFGTENRKKLGDGLNNWEYSSPFSAIDLD LDSINQELEKRFVVETNTVLENVLGEVREKRSRGVVTASDLTRLDTLETF LPEHTLGKIVTNISRSLTARRQKLTDAMELKEVIIQHVLAASYGVSSGYR AIGDADERDRFHCVYEQPTQPQAFARHDAVDDVLLSRLKITQTSAGIREV TLMQSGDPGWFLARAFLFTSRTTNGFIDVLAKNFEANAKALANIIKEKET CYAGTFFPNSKEETTDRLRA* back to topspliced messenger RNA >Ggra10690.t1 ID=Ggra10690.t1|Name=Ggra10690.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=813bp|location=Sequence derived from alignment at tig00000888_pilon:215256..217520+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACTGTACTCTTGAGAACGGTATGGATTCGTGCGATAGTCGGCAGAG AGAGGAACCAGAGGCATTTGGAACAGAGAATAGAAAAAAATTGGGAGATG GTCTTAACAATTGGGAGTACAGCTCACCATTTTCAGCAATTGATCTAGAC CTGGATTCCATCAATCAGGAACTGGAAAAAAGGTTTGTAGTAGAAACGAA CACAGTACTGGAAAATGTATTGGGAGAAGTACGAGAGAAACGTTCTCGTG GTGTTGTAACTGCATCAGATCTAACGCGTCTTGATACTTTGGAGACGTTT CTCCCTGAGCATACTCTGGGAAAGATTGTTACTAACATCAGTCGTTCCCT TACAGCAAGAAGACAAAAACTGACCGACGCTATGGAGTTGAAAGAAGTTA TAATTCAGCACGTACTGGCTGCCTCCTACGGAGTCTCAtctgggtacaga gcaATTGGAGATGCGGACGAGCGGGATCGGTTCCACTGTGTCTACGAGCA ACCGACACAGCCGCAGGCTTTTGCAAGGCATGATGCCGTAGATGATGTGC TGCTGTCTCGCTTGAAAATTACTCAGACCTCGGCAGGAATTCGTGAAGTA ACCCTTATGCAATCTGGAGACCCTGGATGGTTTCTGGCTCGCGCATTTTT GTTTACCTCTCGAACTACTAACGGATTCATAGACGTCTTAGCAAAAAACT TTGAAGCTAATGCTAAGGCACTTGCCAATATTATCAAGGAGAAGGAGACC TGTTATGCAGGCACATTTTTTCCGAACAGCAAAGAGGAAACTACTGATCG TTTGCGAGCTTGA back to topprotein sequence of Ggra10690.t1 >Ggra10690.t1 ID=Ggra10690.t1|Name=Ggra10690.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=271bp
MDCTLENGMDSCDSRQREEPEAFGTENRKKLGDGLNNWEYSSPFSAIDLD LDSINQELEKRFVVETNTVLENVLGEVREKRSRGVVTASDLTRLDTLETF LPEHTLGKIVTNISRSLTARRQKLTDAMELKEVIIQHVLAASYGVSSGYR AIGDADERDRFHCVYEQPTQPQAFARHDAVDDVLLSRLKITQTSAGIREV TLMQSGDPGWFLARAFLFTSRTTNGFIDVLAKNFEANAKALANIIKEKET CYAGTFFPNSKEETTDRLRA* back to topmRNA from alignment at tig00000888_pilon:215256..217520+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10690.t1 ID=Ggra10690.t1|Name=Ggra10690.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2265bp|location=Sequence derived from alignment at tig00000888_pilon:215256..217520+ (Gracilaria gracilis GNS1m male) ATGGACTGTACTCTTGAGAACGGTATGGATTCGTGCGATAGTCGGCAGAG
AGAGGAACCAGAGGCATTTGGAACAGAGAATAGAAAAAAATTGGGAGATG
GTCTTAACAATTGGGAGTACAGCTCACCATTTTCAGCAATTGATCTAGAC
CTGGATTCCATCAATCAGGAACTGGAAAAAAGGTTTGTAGTAGAAACGAA
CACAGTACTGGAAAATGTATTGGGAGAAGTACGAGAGAAACGTTCTCGTG
GTGTTGTAACTGCATCAGATCTAACGCGTCTTGATACTTTGGAGACGTTT
CTCCCTGAGCATACTCTGGGAAAGATTGTTACTAACATCAGTCGTTCCCT
TACAGCAAGAAGACAAAAACTGACCGACGCTATGGAGTTGAAAGAAGTTA
TAATTCAGCACGTACTGGCTGCCTCCTACGGAGTCTCAGTCAGTACGATG
ACATCGAAAAAGaatcaagggtttttctttcaagtgaaatcatctgaaaa
acattactgcgaggtgtggtctgcgctctgctgcacttcggaacgaaggc
aacgcgttgaacgtaatgggacagggtggtcgaatcggccactaagggcg
agttcattgataaaggagttagaggacgaactcgcttcgattaatcgctt
gttcttattcgccccaagagcaaccgtctttagtcttgatgatgataacc
aacggctaagatctcgcgcagtggcacatttcacatttttgactcacatt
aaaaatcctaagaaagcattgggtcctctgaaccatgccatctgctctgc
tctgaatgcattgttcttcgccaatcactattctaggtctggagataagg
cccttgatgtatgggaaaggcttgttcgccttctacaaggcgtttctcca
gctgggcctgtccagccaatgtcagatgccatatttgcagcggatcgtcg
atacaaccacaaAGAGAGTatcagcgcttcgagaagcagaattctcgtag
aaaattgtcgcaaaaatcttttgagaacagtttcgattgtgaaaaaagac
ttcctttttgaaatggttttttaggatgctaaacaaaaactcatttgagc
tctcgttttatttactttaatttgctaatgtgctttgcatatgaaaaatt
caaaacagtctttagagataggcgttatttcacagtaccaaacatttggg
gcgaagatgataaaatctttgtagagggttaatatgaagaaaaggaaatt
ttggagtcaaactggttacaaagccaaatctgggaaactctggatgtttt
tttccttgcgttctcatttgttggttctaaaatgatccaaatggggtgtc
tgtccagaaagacaagaaaatacgccgtgtgacacggcgcatttgtagat
caaaatatccagctcagtggcattactcttgaaacagctgtaagcattct
atatataagcgctagatgttgccgccccgccaatttcgaaagagttcacc
aaaaacatgcagacctctaatttttaagcagattttgattgagaattgtg
cactctagatcaaaacacctagctttgcttccgtagtaggagctttgcga
tCAAATATCTCAACGACAGACGAGGGGCTAGAGCACtcgggacgcacaaa
cgttcattagattatccgtttgttttcggtgatggttcggtacggaaaaa
gtacaaaggaataccgaaaagcgagacaggatgcagagccgtttattcag
cacgccgtaaaccgaagagcacgaatgggcgcccgattaaagcagtagtg
taccgtgaaagttataacggtcgcatagcctcagtgtaccataataatga
ccgcctttttcagacttcaaagtttactttgattccaaagtctgggtaca
gagcaATTGGAGATGCGGACGAGCGGGATCGGTTCCACTGTGTCTACGAG
CAACCGACACAGCCGCAGGCTTTTGCAAGGCATGATGCCGTAGATGATGT
GCTGCTGTCTCGCTTGAAAATTACTCAGACCTCGGCAGGAATTCGTGAAG
TAACCCTTATGCAATCTGGAGACCCTGGATGGTTTCTGGCTCGCGCATTT
TTGTTTACCTCTCGAACTACTAACGGATTCATAGACGTCTTAGCAAAAAA
CTTTGAAGCTAATGCTAAGGCACTTGCCAATATTATCAAGGAGAAGGAGA
CCTGTTATGCAGGCACATTTTTTCCGAACAGCAAAGAGGAAACTACTGAT
CGTTTGCGAGCTTGA back to topCoding sequence (CDS) from alignment at tig00000888_pilon:215256..217520+ >Ggra10690.t1 ID=Ggra10690.t1|Name=Ggra10690.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=813bp|location=Sequence derived from alignment at tig00000888_pilon:215256..217520+ (Gracilaria gracilis GNS1m male) ATGGACTGTACTCTTGAGAACGGTATGGATTCGTGCGATAGTCGGCAGAG AGAGGAACCAGAGGCATTTGGAACAGAGAATAGAAAAAAATTGGGAGATG GTCTTAACAATTGGGAGTACAGCTCACCATTTTCAGCAATTGATCTAGAC CTGGATTCCATCAATCAGGAACTGGAAAAAAGGTTTGTAGTAGAAACGAA CACAGTACTGGAAAATGTATTGGGAGAAGTACGAGAGAAACGTTCTCGTG GTGTTGTAACTGCATCAGATCTAACGCGTCTTGATACTTTGGAGACGTTT CTCCCTGAGCATACTCTGGGAAAGATTGTTACTAACATCAGTCGTTCCCT TACAGCAAGAAGACAAAAACTGACCGACGCTATGGAGTTGAAAGAAGTTA TAATTCAGCACGTACTGGCTGCCTCCTACGGAGTCTCAtctgggtacaga gcaATTGGAGATGCGGACGAGCGGGATCGGTTCCACTGTGTCTACGAGCA ACCGACACAGCCGCAGGCTTTTGCAAGGCATGATGCCGTAGATGATGTGC TGCTGTCTCGCTTGAAAATTACTCAGACCTCGGCAGGAATTCGTGAAGTA ACCCTTATGCAATCTGGAGACCCTGGATGGTTTCTGGCTCGCGCATTTTT GTTTACCTCTCGAACTACTAACGGATTCATAGACGTCTTAGCAAAAAACT TTGAAGCTAATGCTAAGGCACTTGCCAATATTATCAAGGAGAAGGAGACC TGTTATGCAGGCACATTTTTTCCGAACAGCAAAGAGGAAACTACTGATCG TTTGCGAGCTTGA back to top
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