Ggra10639.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10639.t1
Unique NameGgra10639.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length410
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:466265..467494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10639Ggra10639Gracilaria gracilis GNS1m malegenetig00000904_pilon 466265..467494 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10639.t1.stop1Ggra10639.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000904_pilon 466265..466267 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10639.t1.CDS1Ggra10639.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000904_pilon 466265..467494 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10639.t1.exon1Ggra10639.t1.exon1Gracilaria gracilis GNS1m maleexontig00000904_pilon 466265..467494 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10639.t1.start1Ggra10639.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000904_pilon 467492..467494 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10639.t1Ggra10639.t1Gracilaria gracilis GNS1m malepolypeptidetig00000904_pilon 466265..467494 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10639.t1 ID=Ggra10639.t1|Name=Ggra10639.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=410bp
MKATAHRHRQSSASADARRSRRLFSRPAPARHNSERTAPLQSTMTIPPPT
RRRFLSRSSSNRPPRRVFARLAHPKRPASPNAPHNAQLLFEPNTSDVSDS
ASNDAPHSSSHTDLVFIDDVPHVKFCNVGEEEEPLIPDSSTPYISPTSTS
SPYSSSVAALSKQNDVLTSENNDLHRKNSALQAELDAMRSKSSAVSAELA
ALTRQFNDVRSKLTRKVRHLEAELTSITSSSTAASTQPSRSSRARAPNAH
VPHELQPSTSSRAFARVQSLGSVSESCRRRSTRPTTLPIAQSQSGASVRR
AFDGDTSVASPATRARQSLIRRAFVAHIHAHKYRTARQAWLHFLGAERQQ
VTLATFSACVRELAVASEASDRELQLLMQEICEVAVGQHTVMSWNMFSRF
YNRCKHEST*
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spliced messenger RNA

>Ggra10639.t1 ID=Ggra10639.t1|Name=Ggra10639.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1230bp|location=Sequence derived from alignment at tig00000904_pilon:466265..467494- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGCCACCGCACACCGTCACCGCCAATCGAGCGCCAGCGCGGATGC
GCGACGTTCGCGCCGTCTGTTTTCACGCCCGGCTCCCGCGCGCCATAACT
CCGAGCGCACTGCGCCGTTGCAATCCACCATGACGATTCCGCCGCCCACA
CGTCGTCGCTTTCTGTCGCGTTCTTCCTCCAACCGTCCCCCCAGGCGCGT
GTTTGCGCGCCTGGCGCACCCCAAACGCCCAGCGTCGCCGAACGCTCCGC
ACAATGCGCAGCTGTTGTTCGAGCCCAACACCAGCGATGTCTCCGACTCT
GCCAGCAACGACGCGCCGCACTCGTCGTCACACACCGATCTGGTCTTCAT
TGATGACGTGCCGCACGTCAAGTTCTGCAACGTCGGCGAGGAAGAAGAGC
CGTTGATCCCAGATTCCTCCACACCGTACATCTCGCCCACCTCCACGTCC
TCGCCTTACTCTTCTTCTGTTGCCGCGCTCTCCAAACAGAACGACGTGCT
CACGAGTGAGAACAACGACCTGCATCGCAAAAACTCCGCCTTGCAGGCGG
AGTTGGATGCCATGCGATCCAAATCCTCCGCCGTATCGGCTGAATTGGCC
GCTCTCACTCGCCAGTTCAACGACGTGCGATCGAAGCTGACGCGCAAGGT
GCGCCACCTGGAGGCCGAACTCACGTCCATAACCAGTAGCAGCACCGCCG
CGTCAACGCAGCCGTCTCGCTCCTCGCGCGCGCGCGCGCCCAATGCGCAC
GTGCCGCACGAGCTGCAGCCGTCGACGTCGTCGCGCGCGTTTGCACGCGT
GCAGAGTCTGGGAAGTGTGTCAGAGTCGTGTCGTCGTCGGAGCACGAGGC
CGACCACGTTGCCGATCGCGCAGTCGCAGTCGGGCGCTTCGGTGCGACGC
GCTTTTGATGGCGATACCAGTGTGGCGTCGCCTGCCACGCGTGCGAGGCA
GAGTTTGATTCGACGCGCTTTTGTAGCGCATATTCACGCGCACAAGTACC
GGACGGCTCGACAGGCATGGCTTCATTTCTTGGGAGCGGAGCGTCAACAA
GTTACGCTGGCCACCTTCTCGGCGTGTGTGCGGGAATTGGCGGTCGCTTC
GGAGGCAAGTGATCGCGAGTTGCAGTTGCTAATGCAGGAGATATGTGAGG
TTGCCGTTGGACAGCATACAGTTATGAGTTGGAACATGTTTAGTCGCTTT
TATAACAGGTGCAAGCACGAGTCTACATGA
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protein sequence of Ggra10639.t1

>Ggra10639.t1 ID=Ggra10639.t1|Name=Ggra10639.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=410bp
MKATAHRHRQSSASADARRSRRLFSRPAPARHNSERTAPLQSTMTIPPPT
RRRFLSRSSSNRPPRRVFARLAHPKRPASPNAPHNAQLLFEPNTSDVSDS
ASNDAPHSSSHTDLVFIDDVPHVKFCNVGEEEEPLIPDSSTPYISPTSTS
SPYSSSVAALSKQNDVLTSENNDLHRKNSALQAELDAMRSKSSAVSAELA
ALTRQFNDVRSKLTRKVRHLEAELTSITSSSTAASTQPSRSSRARAPNAH
VPHELQPSTSSRAFARVQSLGSVSESCRRRSTRPTTLPIAQSQSGASVRR
AFDGDTSVASPATRARQSLIRRAFVAHIHAHKYRTARQAWLHFLGAERQQ
VTLATFSACVRELAVASEASDRELQLLMQEICEVAVGQHTVMSWNMFSRF
YNRCKHEST*
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mRNA from alignment at tig00000904_pilon:466265..467494-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10639.t1 ID=Ggra10639.t1|Name=Ggra10639.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1230bp|location=Sequence derived from alignment at tig00000904_pilon:466265..467494- (Gracilaria gracilis GNS1m male)
ATGAAGGCCACCGCACACCGTCACCGCCAATCGAGCGCCAGCGCGGATGC
GCGACGTTCGCGCCGTCTGTTTTCACGCCCGGCTCCCGCGCGCCATAACT
CCGAGCGCACTGCGCCGTTGCAATCCACCATGACGATTCCGCCGCCCACA
CGTCGTCGCTTTCTGTCGCGTTCTTCCTCCAACCGTCCCCCCAGGCGCGT
GTTTGCGCGCCTGGCGCACCCCAAACGCCCAGCGTCGCCGAACGCTCCGC
ACAATGCGCAGCTGTTGTTCGAGCCCAACACCAGCGATGTCTCCGACTCT
GCCAGCAACGACGCGCCGCACTCGTCGTCACACACCGATCTGGTCTTCAT
TGATGACGTGCCGCACGTCAAGTTCTGCAACGTCGGCGAGGAAGAAGAGC
CGTTGATCCCAGATTCCTCCACACCGTACATCTCGCCCACCTCCACGTCC
TCGCCTTACTCTTCTTCTGTTGCCGCGCTCTCCAAACAGAACGACGTGCT
CACGAGTGAGAACAACGACCTGCATCGCAAAAACTCCGCCTTGCAGGCGG
AGTTGGATGCCATGCGATCCAAATCCTCCGCCGTATCGGCTGAATTGGCC
GCTCTCACTCGCCAGTTCAACGACGTGCGATCGAAGCTGACGCGCAAGGT
GCGCCACCTGGAGGCCGAACTCACGTCCATAACCAGTAGCAGCACCGCCG
CGTCAACGCAGCCGTCTCGCTCCTCGCGCGCGCGCGCGCCCAATGCGCAC
GTGCCGCACGAGCTGCAGCCGTCGACGTCGTCGCGCGCGTTTGCACGCGT
GCAGAGTCTGGGAAGTGTGTCAGAGTCGTGTCGTCGTCGGAGCACGAGGC
CGACCACGTTGCCGATCGCGCAGTCGCAGTCGGGCGCTTCGGTGCGACGC
GCTTTTGATGGCGATACCAGTGTGGCGTCGCCTGCCACGCGTGCGAGGCA
GAGTTTGATTCGACGCGCTTTTGTAGCGCATATTCACGCGCACAAGTACC
GGACGGCTCGACAGGCATGGCTTCATTTCTTGGGAGCGGAGCGTCAACAA
GTTACGCTGGCCACCTTCTCGGCGTGTGTGCGGGAATTGGCGGTCGCTTC
GGAGGCAAGTGATCGCGAGTTGCAGTTGCTAATGCAGGAGATATGTGAGG
TTGCCGTTGGACAGCATACAGTTATGAGTTGGAACATGTTTAGTCGCTTT
TATAACAGGTGCAAGCACGAGTCTACATGA
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Coding sequence (CDS) from alignment at tig00000904_pilon:466265..467494-

>Ggra10639.t1 ID=Ggra10639.t1|Name=Ggra10639.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1230bp|location=Sequence derived from alignment at tig00000904_pilon:466265..467494- (Gracilaria gracilis GNS1m male)
ATGAAGGCCACCGCACACCGTCACCGCCAATCGAGCGCCAGCGCGGATGC
GCGACGTTCGCGCCGTCTGTTTTCACGCCCGGCTCCCGCGCGCCATAACT
CCGAGCGCACTGCGCCGTTGCAATCCACCATGACGATTCCGCCGCCCACA
CGTCGTCGCTTTCTGTCGCGTTCTTCCTCCAACCGTCCCCCCAGGCGCGT
GTTTGCGCGCCTGGCGCACCCCAAACGCCCAGCGTCGCCGAACGCTCCGC
ACAATGCGCAGCTGTTGTTCGAGCCCAACACCAGCGATGTCTCCGACTCT
GCCAGCAACGACGCGCCGCACTCGTCGTCACACACCGATCTGGTCTTCAT
TGATGACGTGCCGCACGTCAAGTTCTGCAACGTCGGCGAGGAAGAAGAGC
CGTTGATCCCAGATTCCTCCACACCGTACATCTCGCCCACCTCCACGTCC
TCGCCTTACTCTTCTTCTGTTGCCGCGCTCTCCAAACAGAACGACGTGCT
CACGAGTGAGAACAACGACCTGCATCGCAAAAACTCCGCCTTGCAGGCGG
AGTTGGATGCCATGCGATCCAAATCCTCCGCCGTATCGGCTGAATTGGCC
GCTCTCACTCGCCAGTTCAACGACGTGCGATCGAAGCTGACGCGCAAGGT
GCGCCACCTGGAGGCCGAACTCACGTCCATAACCAGTAGCAGCACCGCCG
CGTCAACGCAGCCGTCTCGCTCCTCGCGCGCGCGCGCGCCCAATGCGCAC
GTGCCGCACGAGCTGCAGCCGTCGACGTCGTCGCGCGCGTTTGCACGCGT
GCAGAGTCTGGGAAGTGTGTCAGAGTCGTGTCGTCGTCGGAGCACGAGGC
CGACCACGTTGCCGATCGCGCAGTCGCAGTCGGGCGCTTCGGTGCGACGC
GCTTTTGATGGCGATACCAGTGTGGCGTCGCCTGCCACGCGTGCGAGGCA
GAGTTTGATTCGACGCGCTTTTGTAGCGCATATTCACGCGCACAAGTACC
GGACGGCTCGACAGGCATGGCTTCATTTCTTGGGAGCGGAGCGTCAACAA
GTTACGCTGGCCACCTTCTCGGCGTGTGTGCGGGAATTGGCGGTCGCTTC
GGAGGCAAGTGATCGCGAGTTGCAGTTGCTAATGCAGGAGATATGTGAGG
TTGCCGTTGGACAGCATACAGTTATGAGTTGGAACATGTTTAGTCGCTTT
TATAACAGGTGCAAGCACGAGTCTACATGA
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