Ggra10636.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10636.t1
Unique NameGgra10636.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:462684..463418 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10636Ggra10636Gracilaria gracilis GNS1m malegenetig00000904_pilon 462684..463418 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10636.t1.stop1Ggra10636.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000904_pilon 462684..462686 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10636.t1.CDS1Ggra10636.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000904_pilon 462684..463418 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10636.t1.exon1Ggra10636.t1.exon1Gracilaria gracilis GNS1m maleexontig00000904_pilon 462684..463418 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10636.t1.start1Ggra10636.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000904_pilon 463416..463418 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10636.t1Ggra10636.t1Gracilaria gracilis GNS1m malepolypeptidetig00000904_pilon 462684..463418 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10636.t1 ID=Ggra10636.t1|Name=Ggra10636.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=245bp
MAPRRGRGRGKARARPPQVIRNSIAELPNYDAAVKAALQSNLDAARAYFP
PLPKGASAPANPPLPSEVKLLEEHKLFRDSMLKSPIAVHVPAVATHTPLR
SQLQSFADFFRTPTAGENRPLPADRLWHVDACWILPDVLPPELLPRSLRH
CARPRKRPRTQSPSPPNPLHSFATQEPHNRANDPDANPPADDDQQELEPA
PVDQQDDDEDIDHIADYQTGVHFDDDDGYEEVESGDDAEPIVAF*
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spliced messenger RNA

>Ggra10636.t1 ID=Ggra10636.t1|Name=Ggra10636.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000904_pilon:462684..463418- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCCGCGACGCGGCCGCGGCCGCGGCAAGGCGCGCGCCCGCCCGCC
GCAGGTCATCCGCAACAGCATCGCCGAGCTGCCCAACTACGACGCCGCCG
TCAAGGCCGCGCTGCAGAGCAACCTCGATGCCGCGCGCGCCTACTTCCCG
CCGCTGCCAAAGGGCGCCAGCGCGCCGGCCAACCCGCCGCTGCCGTCCGA
AGTGAAGCTGCTGGAGGAGCACAAGCTCTTCAGGGACAGCATGCTCAAGT
CGCCCATCGCCGTGCATGTGCCCGCCGTCGCTACGCACACCCCGCTCAGA
TCGCAGCTGCAGTCGTTCGCCGACTTCTTCCGCACCCCCACCGCCGGCGA
AAACCGCCCGCTGCCCGCCGATCGGCTGTGGCATGTGGACGCTTGCTGGA
TTTTGCCGGACGTTCTCCCGCCCGAGTTGCTGCCGCGCTCACTGAGGCAC
TGCGCGCGCCCCAGGAAGCGCCCCAGGACGCAGTCGCCGTCGCCGCCCAA
CCCGCTGCATAGCTTTGCCACGCAGGAGCCGCACAATCGTGCAAATGATC
CGGACGCCAACCCCCCCGCGGACGACGACCAGCAGGAGCTTGAGCCCGCC
CCAGTGGATCAGCAGGACGATGATGAGGACATTGATCATATTGCCGACTA
TCAAACCGGCGTGCATTTCGATGATGATGACGGCTATGAGGAAGTTGAAA
GTGGCGATGATGCCGAACCTATCGTTGCTTTCTGA
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protein sequence of Ggra10636.t1

>Ggra10636.t1 ID=Ggra10636.t1|Name=Ggra10636.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MAPRRGRGRGKARARPPQVIRNSIAELPNYDAAVKAALQSNLDAARAYFP
PLPKGASAPANPPLPSEVKLLEEHKLFRDSMLKSPIAVHVPAVATHTPLR
SQLQSFADFFRTPTAGENRPLPADRLWHVDACWILPDVLPPELLPRSLRH
CARPRKRPRTQSPSPPNPLHSFATQEPHNRANDPDANPPADDDQQELEPA
PVDQQDDDEDIDHIADYQTGVHFDDDDGYEEVESGDDAEPIVAF*
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mRNA from alignment at tig00000904_pilon:462684..463418-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10636.t1 ID=Ggra10636.t1|Name=Ggra10636.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000904_pilon:462684..463418- (Gracilaria gracilis GNS1m male)
ATGGCGCCGCGACGCGGCCGCGGCCGCGGCAAGGCGCGCGCCCGCCCGCC
GCAGGTCATCCGCAACAGCATCGCCGAGCTGCCCAACTACGACGCCGCCG
TCAAGGCCGCGCTGCAGAGCAACCTCGATGCCGCGCGCGCCTACTTCCCG
CCGCTGCCAAAGGGCGCCAGCGCGCCGGCCAACCCGCCGCTGCCGTCCGA
AGTGAAGCTGCTGGAGGAGCACAAGCTCTTCAGGGACAGCATGCTCAAGT
CGCCCATCGCCGTGCATGTGCCCGCCGTCGCTACGCACACCCCGCTCAGA
TCGCAGCTGCAGTCGTTCGCCGACTTCTTCCGCACCCCCACCGCCGGCGA
AAACCGCCCGCTGCCCGCCGATCGGCTGTGGCATGTGGACGCTTGCTGGA
TTTTGCCGGACGTTCTCCCGCCCGAGTTGCTGCCGCGCTCACTGAGGCAC
TGCGCGCGCCCCAGGAAGCGCCCCAGGACGCAGTCGCCGTCGCCGCCCAA
CCCGCTGCATAGCTTTGCCACGCAGGAGCCGCACAATCGTGCAAATGATC
CGGACGCCAACCCCCCCGCGGACGACGACCAGCAGGAGCTTGAGCCCGCC
CCAGTGGATCAGCAGGACGATGATGAGGACATTGATCATATTGCCGACTA
TCAAACCGGCGTGCATTTCGATGATGATGACGGCTATGAGGAAGTTGAAA
GTGGCGATGATGCCGAACCTATCGTTGCTTTCTGA
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Coding sequence (CDS) from alignment at tig00000904_pilon:462684..463418-

>Ggra10636.t1 ID=Ggra10636.t1|Name=Ggra10636.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=735bp|location=Sequence derived from alignment at tig00000904_pilon:462684..463418- (Gracilaria gracilis GNS1m male)
ATGGCGCCGCGACGCGGCCGCGGCCGCGGCAAGGCGCGCGCCCGCCCGCC
GCAGGTCATCCGCAACAGCATCGCCGAGCTGCCCAACTACGACGCCGCCG
TCAAGGCCGCGCTGCAGAGCAACCTCGATGCCGCGCGCGCCTACTTCCCG
CCGCTGCCAAAGGGCGCCAGCGCGCCGGCCAACCCGCCGCTGCCGTCCGA
AGTGAAGCTGCTGGAGGAGCACAAGCTCTTCAGGGACAGCATGCTCAAGT
CGCCCATCGCCGTGCATGTGCCCGCCGTCGCTACGCACACCCCGCTCAGA
TCGCAGCTGCAGTCGTTCGCCGACTTCTTCCGCACCCCCACCGCCGGCGA
AAACCGCCCGCTGCCCGCCGATCGGCTGTGGCATGTGGACGCTTGCTGGA
TTTTGCCGGACGTTCTCCCGCCCGAGTTGCTGCCGCGCTCACTGAGGCAC
TGCGCGCGCCCCAGGAAGCGCCCCAGGACGCAGTCGCCGTCGCCGCCCAA
CCCGCTGCATAGCTTTGCCACGCAGGAGCCGCACAATCGTGCAAATGATC
CGGACGCCAACCCCCCCGCGGACGACGACCAGCAGGAGCTTGAGCCCGCC
CCAGTGGATCAGCAGGACGATGATGAGGACATTGATCATATTGCCGACTA
TCAAACCGGCGTGCATTTCGATGATGATGACGGCTATGAGGAAGTTGAAA
GTGGCGATGATGCCGAACCTATCGTTGCTTTCTGA
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