Ggra1061.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1061.t1
Unique NameGgra1061.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000868_piloncontigtig00000868_pilon:79501..80598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1061Ggra1061Gracilaria gracilis GNS1m malegenetig00000868_pilon 79501..80598 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1061.t1.start1Ggra1061.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000868_pilon 79501..79503 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1061.t1.CDS1Ggra1061.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000868_pilon 79501..80598 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1061.t1.exon1Ggra1061.t1.exon1Gracilaria gracilis GNS1m maleexontig00000868_pilon 79501..80598 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1061.t1.stop1Ggra1061.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000868_pilon 80596..80598 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1061.t1Ggra1061.t1Gracilaria gracilis GNS1m malepolypeptidetig00000868_pilon 79501..80598 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1061.t1 ID=Ggra1061.t1|Name=Ggra1061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=366bp
MDEQVVPTFNAAVNGGVRKTKAKALRRSHTAKGDLSSLARHKSAITEEPK
PALATVPTNSAKSPAVRSALSSFLSPAAEYPGKLRWETPARAGKWAENWE
GAREMGLPVCVRSAQAPAVSNVVRASVADAVVAYVGPHLPRHTVAKWLCL
LFEYLELNADEQVLVVCLLRRYVRNGGRFVGRGDWARPQRWECVVAVASY
FAVLLSEEFPGRTAMDLRELLGPNFRFGSEQVSFLKVVDWRISIEAEDFQ
EVKEASQKISEGDAAAKQAMNDWFQIDKAMAETKRRAAEEAAAAAAAAAA
VAATAMAQSPAPTVGKKRGYAAIVPADDSVVPRVVVPRLDGAHVHAVPAA
PAAFVPAISHWVPHW*
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spliced messenger RNA

>Ggra1061.t1 ID=Ggra1061.t1|Name=Ggra1061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000868_pilon:79501..80598+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGAGCAAGTCGTGCCGACCTTCAATGCAGCCGTCAACGGCGGCGT
GCGCAAGACCAAGGCCAAGGCGTTGCGTAGGTCGCATACCGCCAAGGGTG
ACTTGTCGTCGCTGGCGCGACACAAGTCTGCCATCACCGAGGAACCGAAA
CCTGCGCTAGCCACAGTCCCAACCAACTCCGCAAAGTCGCCGGCAGTCCG
TTCTGCCTTGTCCAGCTTCCTGTCGCCCGCCGCCGAGTATCCCGGTAAGC
TCCGTTGGGAAACGCCCGCCCGCGCTGGCAAATGGGCCGAAAACTGGGAG
GGCGCACGTGAAATGGGTTTGCCTGTTTGCGTGCGTTCCGCGCAGGCGCC
TGCTGTCTCCAACGTTGTCCGCGCGTCGGTTGCGGATGCAGTCGTGGCTT
ACGTTGGTCCACACCTTCCGCGTCATACCGTTGCGAAGTGGCTCTGCCTG
CTCTTCGAGTACCTGGAACTCAATGCTGACGAACAGGTGCTCGTTGTTTG
TCTGCTCCGCCGCTATGTGCGAAATGGTGGCCGCTTTGTCGGTCGCGGCG
ATTGGGCGCGTCCACAGCGATGGGAATGTGTAGTTGCTGTCGCCAGTTAC
TTTGCTGTGCTTCTAAGTGAAGAGTTCCCCGGCCGTACTGCCATGGATCT
TCGTGAACTGCTGGGCCCGAACTTCCGTTTCGGTTCCGAGCAGGTCTCGT
TCCTCAAAGTCGTTGACTGGCGCATCTCTATTGAAGCCGAGGACTTCCAA
GAGGTCAAGGAAGCATCACAAAAGATATCCGAAGGAGACGCTGCTGCCAA
ACAGGCGATGAACGACTGGTTCCAGATTGACAAGGCTATGGCTGAGACCA
AGCGCCGCgctgccgaagaggctgctgctgctgccgccgccgctgcggca
gttgctgcaactgcaatggctCAGAGCCCGGCCCCGACAGTTGGTAAGAA
ACGAGGTTACGCTGCTATTGTTCCGGCTGATGACTCTGTTGTCCCGAGAG
TCGTTGTGCCGCGCTTGGACGGAGCTCATGTTCATGCAGTACCAGCTGCT
CCTGCCGCGTTTGTGCCGGCCATATCACATTGGGTGCCACATTGGTAA
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protein sequence of Ggra1061.t1

>Ggra1061.t1 ID=Ggra1061.t1|Name=Ggra1061.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MDEQVVPTFNAAVNGGVRKTKAKALRRSHTAKGDLSSLARHKSAITEEPK
PALATVPTNSAKSPAVRSALSSFLSPAAEYPGKLRWETPARAGKWAENWE
GAREMGLPVCVRSAQAPAVSNVVRASVADAVVAYVGPHLPRHTVAKWLCL
LFEYLELNADEQVLVVCLLRRYVRNGGRFVGRGDWARPQRWECVVAVASY
FAVLLSEEFPGRTAMDLRELLGPNFRFGSEQVSFLKVVDWRISIEAEDFQ
EVKEASQKISEGDAAAKQAMNDWFQIDKAMAETKRRAAEEAAAAAAAAAA
VAATAMAQSPAPTVGKKRGYAAIVPADDSVVPRVVVPRLDGAHVHAVPAA
PAAFVPAISHWVPHW*
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mRNA from alignment at tig00000868_pilon:79501..80598+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1061.t1 ID=Ggra1061.t1|Name=Ggra1061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000868_pilon:79501..80598+ (Gracilaria gracilis GNS1m male)
ATGGACGAGCAAGTCGTGCCGACCTTCAATGCAGCCGTCAACGGCGGCGT
GCGCAAGACCAAGGCCAAGGCGTTGCGTAGGTCGCATACCGCCAAGGGTG
ACTTGTCGTCGCTGGCGCGACACAAGTCTGCCATCACCGAGGAACCGAAA
CCTGCGCTAGCCACAGTCCCAACCAACTCCGCAAAGTCGCCGGCAGTCCG
TTCTGCCTTGTCCAGCTTCCTGTCGCCCGCCGCCGAGTATCCCGGTAAGC
TCCGTTGGGAAACGCCCGCCCGCGCTGGCAAATGGGCCGAAAACTGGGAG
GGCGCACGTGAAATGGGTTTGCCTGTTTGCGTGCGTTCCGCGCAGGCGCC
TGCTGTCTCCAACGTTGTCCGCGCGTCGGTTGCGGATGCAGTCGTGGCTT
ACGTTGGTCCACACCTTCCGCGTCATACCGTTGCGAAGTGGCTCTGCCTG
CTCTTCGAGTACCTGGAACTCAATGCTGACGAACAGGTGCTCGTTGTTTG
TCTGCTCCGCCGCTATGTGCGAAATGGTGGCCGCTTTGTCGGTCGCGGCG
ATTGGGCGCGTCCACAGCGATGGGAATGTGTAGTTGCTGTCGCCAGTTAC
TTTGCTGTGCTTCTAAGTGAAGAGTTCCCCGGCCGTACTGCCATGGATCT
TCGTGAACTGCTGGGCCCGAACTTCCGTTTCGGTTCCGAGCAGGTCTCGT
TCCTCAAAGTCGTTGACTGGCGCATCTCTATTGAAGCCGAGGACTTCCAA
GAGGTCAAGGAAGCATCACAAAAGATATCCGAAGGAGACGCTGCTGCCAA
ACAGGCGATGAACGACTGGTTCCAGATTGACAAGGCTATGGCTGAGACCA
AGCGCCGCgctgccgaagaggctgctgctgctgccgccgccgctgcggca
gttgctgcaactgcaatggctCAGAGCCCGGCCCCGACAGTTGGTAAGAA
ACGAGGTTACGCTGCTATTGTTCCGGCTGATGACTCTGTTGTCCCGAGAG
TCGTTGTGCCGCGCTTGGACGGAGCTCATGTTCATGCAGTACCAGCTGCT
CCTGCCGCGTTTGTGCCGGCCATATCACATTGGGTGCCACATTGGTAA
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Coding sequence (CDS) from alignment at tig00000868_pilon:79501..80598+

>Ggra1061.t1 ID=Ggra1061.t1|Name=Ggra1061.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1098bp|location=Sequence derived from alignment at tig00000868_pilon:79501..80598+ (Gracilaria gracilis GNS1m male)
ATGGACGAGCAAGTCGTGCCGACCTTCAATGCAGCCGTCAACGGCGGCGT
GCGCAAGACCAAGGCCAAGGCGTTGCGTAGGTCGCATACCGCCAAGGGTG
ACTTGTCGTCGCTGGCGCGACACAAGTCTGCCATCACCGAGGAACCGAAA
CCTGCGCTAGCCACAGTCCCAACCAACTCCGCAAAGTCGCCGGCAGTCCG
TTCTGCCTTGTCCAGCTTCCTGTCGCCCGCCGCCGAGTATCCCGGTAAGC
TCCGTTGGGAAACGCCCGCCCGCGCTGGCAAATGGGCCGAAAACTGGGAG
GGCGCACGTGAAATGGGTTTGCCTGTTTGCGTGCGTTCCGCGCAGGCGCC
TGCTGTCTCCAACGTTGTCCGCGCGTCGGTTGCGGATGCAGTCGTGGCTT
ACGTTGGTCCACACCTTCCGCGTCATACCGTTGCGAAGTGGCTCTGCCTG
CTCTTCGAGTACCTGGAACTCAATGCTGACGAACAGGTGCTCGTTGTTTG
TCTGCTCCGCCGCTATGTGCGAAATGGTGGCCGCTTTGTCGGTCGCGGCG
ATTGGGCGCGTCCACAGCGATGGGAATGTGTAGTTGCTGTCGCCAGTTAC
TTTGCTGTGCTTCTAAGTGAAGAGTTCCCCGGCCGTACTGCCATGGATCT
TCGTGAACTGCTGGGCCCGAACTTCCGTTTCGGTTCCGAGCAGGTCTCGT
TCCTCAAAGTCGTTGACTGGCGCATCTCTATTGAAGCCGAGGACTTCCAA
GAGGTCAAGGAAGCATCACAAAAGATATCCGAAGGAGACGCTGCTGCCAA
ACAGGCGATGAACGACTGGTTCCAGATTGACAAGGCTATGGCTGAGACCA
AGCGCCGCgctgccgaagaggctgctgctgctgccgccgccgctgcggca
gttgctgcaactgcaatggctCAGAGCCCGGCCCCGACAGTTGGTAAGAA
ACGAGGTTACGCTGCTATTGTTCCGGCTGATGACTCTGTTGTCCCGAGAG
TCGTTGTGCCGCGCTTGGACGGAGCTCATGTTCATGCAGTACCAGCTGCT
CCTGCCGCGTTTGTGCCGGCCATATCACATTGGGTGCCACATTGGTAA
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