Ggra10605.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10605.t1
Unique NameGgra10605.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length202
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:372964..373569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10605Ggra10605Gracilaria gracilis GNS1m malegenetig00000904_pilon 372964..373569 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10605.t1.start1Ggra10605.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000904_pilon 372964..372966 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10605.t1.CDS1Ggra10605.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000904_pilon 372964..373569 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10605.t1.exon1Ggra10605.t1.exon1Gracilaria gracilis GNS1m maleexontig00000904_pilon 372964..373569 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10605.t1.stop1Ggra10605.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000904_pilon 373567..373569 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10605.t1Ggra10605.t1Gracilaria gracilis GNS1m malepolypeptidetig00000904_pilon 372964..373569 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10605.t1 ID=Ggra10605.t1|Name=Ggra10605.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=202bp
METESLSGPCRRSARSLANRSRGSTRDRRGRGGRGGRGGRGGRDGRGGRG
GRGGRGGRGGRSGSSKASRRASKVDVNLGSNEYRYREEDLSDEDQDSGVD
FEEASKIRPAEDAEEVEVSDTPLLTELTADFSGIEQVLRSVPQWVRLGES
TRFALGISENQTVYDYLDPLETQETYPQDDASASDGSELVKQTVEKLSLD
S*
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spliced messenger RNA

>Ggra10605.t1 ID=Ggra10605.t1|Name=Ggra10605.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=606bp|location=Sequence derived from alignment at tig00000904_pilon:372964..373569+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGACGGAATCGCTTTCTGGTCCATGTCGGCGGTCTGCTCGCAGCCT
GGCTAATCGCAGCCGAGGCAGCACACGTGACCGGCGCGGACGTGGTGGAA
GGGGTGGACGTGGCGGGCGTGGCGGAAGAGATGGGAGAGGCGGGAGAGGT
GGAAGGGGCGGGAGAGGCGGACGAGGCGGGAGAAGTGGTTCAAGCAAAGC
ATCACGCCGAGCCTCCAAAGTCGACGTAAATCTTGGGTCGAACGAATACC
GATACCGTGAGGAAGATCTAAGTGATGAGGACCAAGATAGTGGCGTGGAT
TTTGAAGAAGCCAGCAAGATACGGCCTGCGGAAGATGCAGAGGAGGTAGA
AGTCAGTGATACGCCTCTATTAACAGAATTAACGGCTGACTTTTCTGGAA
TCGAACAGGTTCTCCGTAGTGTCCCTCAGTGGGTGAGGCTTGGAGAATCC
ACACGCTTCGCTCTCGGCATTTCTGAGAATCAAACTGTCTACGACTATCT
TGATCCTCTGGAAACACAAGAAACTTATCCCCAGGACGATGCCTCTGCAT
CCGATGGTAGTGAACTCGTGAAGCAAACGGTTGAGAAACTGTCCCTTGAC
TCATGA
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protein sequence of Ggra10605.t1

>Ggra10605.t1 ID=Ggra10605.t1|Name=Ggra10605.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=202bp
METESLSGPCRRSARSLANRSRGSTRDRRGRGGRGGRGGRGGRDGRGGRG
GRGGRGGRGGRSGSSKASRRASKVDVNLGSNEYRYREEDLSDEDQDSGVD
FEEASKIRPAEDAEEVEVSDTPLLTELTADFSGIEQVLRSVPQWVRLGES
TRFALGISENQTVYDYLDPLETQETYPQDDASASDGSELVKQTVEKLSLD
S*
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mRNA from alignment at tig00000904_pilon:372964..373569+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10605.t1 ID=Ggra10605.t1|Name=Ggra10605.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=606bp|location=Sequence derived from alignment at tig00000904_pilon:372964..373569+ (Gracilaria gracilis GNS1m male)
ATGGAGACGGAATCGCTTTCTGGTCCATGTCGGCGGTCTGCTCGCAGCCT
GGCTAATCGCAGCCGAGGCAGCACACGTGACCGGCGCGGACGTGGTGGAA
GGGGTGGACGTGGCGGGCGTGGCGGAAGAGATGGGAGAGGCGGGAGAGGT
GGAAGGGGCGGGAGAGGCGGACGAGGCGGGAGAAGTGGTTCAAGCAAAGC
ATCACGCCGAGCCTCCAAAGTCGACGTAAATCTTGGGTCGAACGAATACC
GATACCGTGAGGAAGATCTAAGTGATGAGGACCAAGATAGTGGCGTGGAT
TTTGAAGAAGCCAGCAAGATACGGCCTGCGGAAGATGCAGAGGAGGTAGA
AGTCAGTGATACGCCTCTATTAACAGAATTAACGGCTGACTTTTCTGGAA
TCGAACAGGTTCTCCGTAGTGTCCCTCAGTGGGTGAGGCTTGGAGAATCC
ACACGCTTCGCTCTCGGCATTTCTGAGAATCAAACTGTCTACGACTATCT
TGATCCTCTGGAAACACAAGAAACTTATCCCCAGGACGATGCCTCTGCAT
CCGATGGTAGTGAACTCGTGAAGCAAACGGTTGAGAAACTGTCCCTTGAC
TCATGA
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Coding sequence (CDS) from alignment at tig00000904_pilon:372964..373569+

>Ggra10605.t1 ID=Ggra10605.t1|Name=Ggra10605.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=606bp|location=Sequence derived from alignment at tig00000904_pilon:372964..373569+ (Gracilaria gracilis GNS1m male)
ATGGAGACGGAATCGCTTTCTGGTCCATGTCGGCGGTCTGCTCGCAGCCT
GGCTAATCGCAGCCGAGGCAGCACACGTGACCGGCGCGGACGTGGTGGAA
GGGGTGGACGTGGCGGGCGTGGCGGAAGAGATGGGAGAGGCGGGAGAGGT
GGAAGGGGCGGGAGAGGCGGACGAGGCGGGAGAAGTGGTTCAAGCAAAGC
ATCACGCCGAGCCTCCAAAGTCGACGTAAATCTTGGGTCGAACGAATACC
GATACCGTGAGGAAGATCTAAGTGATGAGGACCAAGATAGTGGCGTGGAT
TTTGAAGAAGCCAGCAAGATACGGCCTGCGGAAGATGCAGAGGAGGTAGA
AGTCAGTGATACGCCTCTATTAACAGAATTAACGGCTGACTTTTCTGGAA
TCGAACAGGTTCTCCGTAGTGTCCCTCAGTGGGTGAGGCTTGGAGAATCC
ACACGCTTCGCTCTCGGCATTTCTGAGAATCAAACTGTCTACGACTATCT
TGATCCTCTGGAAACACAAGAAACTTATCCCCAGGACGATGCCTCTGCAT
CCGATGGTAGTGAACTCGTGAAGCAAACGGTTGAGAAACTGTCCCTTGAC
TCATGA
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