Ggra10590.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra10590.t1
Unique Name	Ggra10590.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	779

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000904_pilon:328498..330834-
coding sequence from alignment at tig00000904_pilon:328498..330834-

mRNA sequence

>Ggra10590.t1 ID=Ggra10590.t1|Name=Ggra10590.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=779bp
MEDDDYFGHISAPGNEDEEDAANDLTFGDIGDIKAGDDASDAVWKPDHQT
LSRRIEEEKEVVQRSRYASPSSQTTRSDLFENRPPLPRSDQNAAPSDAAW
NRLLKAVQGQRDAQRMGKQHSYPPHPQQLSFSGSPPSDHASQPVTSAQPQ
FPQQPSSLVNPQEYERTMIAYYEQQTRQLLMRHKETAELQLREAIAAQNA
GVVFDRAKFDEHQTAARQRILNEFYTRVNQIRYLAWLQSRQLGQQNAPVP
KQSQNVVRDEQTRAFGFQAPSQERTSENVLRSGLFGNGHAQSSVNRSSSN
PMYASNGNSRVLSALHNKGESNTSRDPRNEAVDVRELERRLLEASIDKAS
EAKHEQNMGNRTSEGRPEPRRHGKKANRLESMTDKDQELVFRVYLRQVES
AVTYKDDYYNGMYRRNEKLGVGELYSDLAKSVNETRLRNRLRGTSGRPYR
SRRLKRSLQSNEKQLPSSSQSNESSMSALATALGSVQTWNPKAPRRVMDF
SSIERKTGKGHESKLLRDDERVKVRHEIERGYDIIAVIHDIVRGESGEVL
EDQIRSLLQTLHIESTDEEPPDSAIVANPGLKFFGTLCVLEKGRRYLARV
LDILDISERIRVIPSVFESLGAMIYSLQRSQRSTLSVNGDIISKSLQTIG
DSHTSALDCITMLSSFSSTHSGRPDAFLTTFRSASGAKLMYCCMQRISRG
LYKKEIDEEDLNRAEIDKLAEVFTEMLQRIFDEAELVNRAWEVTGSLDSI
LAGEARSMLRAELNRLLQSGAAPPPPEG*

spliced messenger RNA

>Ggra10590.t1 ID=Ggra10590.t1|Name=Ggra10590.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2337bp|location=Sequence derived from alignment at tig00000904_pilon:328498..330834- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGACGACGATTACTTTGGCCACATTTCCGCACCGGGTAATGAAGA
CGAGGAAGACGCAGCTAATGACCTAACGTTTGGAGATATTGGGGACATCA
AGGCTGGTGATGATGCTTCTGATGCGGTGTGGAAACCGGATCATCAAACC
CTTTCTCGAAGAATTGAGGAGGAGAAAGAGGTTGTGCAAAGATCCCGATA
TGCATCACCGTCCTCTCAGACTACACGAAGCGATCTGTTTGAAAACCGTC
CCCCCCTGCCGCGAAGTGACCAGAACGCAGCGCCATCGGACGCGGCGTGG
AATCGTCTGCTAAAAGCTGTACAAGGACAACGAGATGCACAGCGAATGGG
CAAGCAGCACTCTTACCCTCCCCACCCTCAACAACTCTCTTTTTCAGGTT
CTCCTCCCAGCGACCATGCCTCGCAGCCAGTAACAAGTGCTCAACCGCAA
TTTCCCCAACAACCGTCTTCATTAGTGAATCCTCAGGAATACGAACGAAC
AATGATTGCGTACTATGAACAACAAACACGGCAGTTGTTAATGCGCCACA
AGGAAACGGCGGAGCTTCAACTAAGAGAAGCAATTGCAGCACAGAATGCT
GGCGTTGTATTTGACAGAGCCAAGTTTGATGAACATCAAACCGCTGCGCG
CCAACGGATACTCAATGAGTTTTATACTCGTGTCAATCAGATTCGCTACC
TTGCCTGGCTTCAATCGCGTCAGCTTGGACAGCAAAACGCGCCTGTTCCG
AAACAAAGCCAAAATGTTGTGCGTGATGAACAGACGCGTGCGTTTGGTTT
TCAAGCACCAAGTCAGGAGCGCACATCAGAAAATGTGCTCAGATCTGGTC
TGTTTGGCAATGGTCACGCACAATCTTCCGTAAATCGTTCTAGCTCAAAT
CCCATGTATGCTTCAAATGGAAATTCACGGGTTCTTTCTGCGCTTCACAA
CAAGGGGGAATCCAATACTTCACGTGATCCAAGAAATGAAGCAGTGGATG
TGCGGGAGTTGGAACGCCGCTTATTGGAAGCAAGTATAGATAAGGCTTCG
GAGGCGAAACATGAACAAAACATGGGCAACAGAACCTCCGAAGGAAGACC
AGAACCTAGAAGGCATGGGAAAAAAGCAAACCGTCTGGAGTCAATGACCG
ACAAAGACCAGGAGTTGGTCTTCAGGGTGTATTTGAGGCAGGTAGAATCG
GCAGTTACGTATAAGGATGATTACTATAATGGTATGTATCGGAGGAATGA
GAAGCTTGGGGTAGGGGAATTATATTCGGATCTTGCGAAAAGCGTTAATG
AAACGAGACTAAGAAATCGATTGCGCGGGACCAGTGGTCGCCCGTACAGA
AGTCGCCGATTGAAGCGTTCCCTGCAGTCTAATGAAAAGCAGCTACCCTC
ATCTTCACAGTCAAATGAGTCTTCCATGAGCGCTCTAGCGACTGCACTCG
GTTCAGTTCAAACATGGAACCCTAAGGCCCCAAGAAGGGTTATGGACTTC
AGCTCGATTGAACGCAAAACTGGTAAAGGACATGAATCCAAGCTGCTTCG
GGACGACGAGAGAGTGAAAGTAAGACATGAGATTGAGAGAGGTTATGATA
TCATAGCTGTGATTCACGACATTGTCAGAGGAGAAAGCGGCGAAGTGTTG
GAAGACCAAATTCGTAGTCTTCTTCAAACACTACATATCGAAAGCACGGA
TGAAGAACCGCCTGATTCTGCGATCGTTGCAAACCCGGGGCTCAAATTCT
TTGGCACGCTTTGCGTGTTGGAGAAGGGCAGAAGATATCTGGCAAGAGTC
TTAGACATTCTTGACATATCTGAGCGAATTCGGGTTATTCCTTCGGTGTT
CGAAAGCTTAGGGGCCATGATATATTCTCTCCAACGCTCTCAACGTTCCA
CGTTGTCCGTGAACGGCGATATCATATCCAAGTCGCTTCAGACGATAGGC
GACTCGCACACGTCAGCGTTGGATTGCATAACAATGCTGTCTTCATTCAG
CTCAACTCATTCTGGTCGTCCTGATGCCTTTCTGACCACTTTTCGAAGCG
CTTCTGGTGCTAAGCTCATGTACTGTTGCATGCAAAGGATATCCAGGGGT
TTGTATAAAAAGGAAATAGATGAAGAGGATCTAAATCGAGCTGAAATCGA
TAAGCTCGCGGAAGTATTTACTGAAATGCTACAACGCATATTTGATGAGG
CAGAACTTGTTAACAGAGCGTGGGAAGTGACTGGAAGTCTCGACAGTATT
CTAGCTGGCGAAGCGAGATCAATGCTTCGTGCAGAGCTCAATCGACTGTT
GCAAAGTGGTGCAGCTCCCCCACCCCCAGAAGGATAG

protein sequence of Ggra10590.t1

>Ggra10590.t1 ID=Ggra10590.t1|Name=Ggra10590.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=779bp
MEDDDYFGHISAPGNEDEEDAANDLTFGDIGDIKAGDDASDAVWKPDHQT
LSRRIEEEKEVVQRSRYASPSSQTTRSDLFENRPPLPRSDQNAAPSDAAW
NRLLKAVQGQRDAQRMGKQHSYPPHPQQLSFSGSPPSDHASQPVTSAQPQ
FPQQPSSLVNPQEYERTMIAYYEQQTRQLLMRHKETAELQLREAIAAQNA
GVVFDRAKFDEHQTAARQRILNEFYTRVNQIRYLAWLQSRQLGQQNAPVP
KQSQNVVRDEQTRAFGFQAPSQERTSENVLRSGLFGNGHAQSSVNRSSSN
PMYASNGNSRVLSALHNKGESNTSRDPRNEAVDVRELERRLLEASIDKAS
EAKHEQNMGNRTSEGRPEPRRHGKKANRLESMTDKDQELVFRVYLRQVES
AVTYKDDYYNGMYRRNEKLGVGELYSDLAKSVNETRLRNRLRGTSGRPYR
SRRLKRSLQSNEKQLPSSSQSNESSMSALATALGSVQTWNPKAPRRVMDF
SSIERKTGKGHESKLLRDDERVKVRHEIERGYDIIAVIHDIVRGESGEVL
EDQIRSLLQTLHIESTDEEPPDSAIVANPGLKFFGTLCVLEKGRRYLARV
LDILDISERIRVIPSVFESLGAMIYSLQRSQRSTLSVNGDIISKSLQTIG
DSHTSALDCITMLSSFSSTHSGRPDAFLTTFRSASGAKLMYCCMQRISRG
LYKKEIDEEDLNRAEIDKLAEVFTEMLQRIFDEAELVNRAWEVTGSLDSI
LAGEARSMLRAELNRLLQSGAAPPPPEG*

mRNA from alignment at tig00000904_pilon:328498..330834-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra10590.t1 ID=Ggra10590.t1|Name=Ggra10590.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2337bp|location=Sequence derived from alignment at tig00000904_pilon:328498..330834- (Gracilaria gracilis GNS1m male)
ATGGAAGACGACGATTACTTTGGCCACATTTCCGCACCGGGTAATGAAGA
CGAGGAAGACGCAGCTAATGACCTAACGTTTGGAGATATTGGGGACATCA
AGGCTGGTGATGATGCTTCTGATGCGGTGTGGAAACCGGATCATCAAACC
CTTTCTCGAAGAATTGAGGAGGAGAAAGAGGTTGTGCAAAGATCCCGATA
TGCATCACCGTCCTCTCAGACTACACGAAGCGATCTGTTTGAAAACCGTC
CCCCCCTGCCGCGAAGTGACCAGAACGCAGCGCCATCGGACGCGGCGTGG
AATCGTCTGCTAAAAGCTGTACAAGGACAACGAGATGCACAGCGAATGGG
CAAGCAGCACTCTTACCCTCCCCACCCTCAACAACTCTCTTTTTCAGGTT
CTCCTCCCAGCGACCATGCCTCGCAGCCAGTAACAAGTGCTCAACCGCAA
TTTCCCCAACAACCGTCTTCATTAGTGAATCCTCAGGAATACGAACGAAC
AATGATTGCGTACTATGAACAACAAACACGGCAGTTGTTAATGCGCCACA
AGGAAACGGCGGAGCTTCAACTAAGAGAAGCAATTGCAGCACAGAATGCT
GGCGTTGTATTTGACAGAGCCAAGTTTGATGAACATCAAACCGCTGCGCG
CCAACGGATACTCAATGAGTTTTATACTCGTGTCAATCAGATTCGCTACC
TTGCCTGGCTTCAATCGCGTCAGCTTGGACAGCAAAACGCGCCTGTTCCG
AAACAAAGCCAAAATGTTGTGCGTGATGAACAGACGCGTGCGTTTGGTTT
TCAAGCACCAAGTCAGGAGCGCACATCAGAAAATGTGCTCAGATCTGGTC
TGTTTGGCAATGGTCACGCACAATCTTCCGTAAATCGTTCTAGCTCAAAT
CCCATGTATGCTTCAAATGGAAATTCACGGGTTCTTTCTGCGCTTCACAA
CAAGGGGGAATCCAATACTTCACGTGATCCAAGAAATGAAGCAGTGGATG
TGCGGGAGTTGGAACGCCGCTTATTGGAAGCAAGTATAGATAAGGCTTCG
GAGGCGAAACATGAACAAAACATGGGCAACAGAACCTCCGAAGGAAGACC
AGAACCTAGAAGGCATGGGAAAAAAGCAAACCGTCTGGAGTCAATGACCG
ACAAAGACCAGGAGTTGGTCTTCAGGGTGTATTTGAGGCAGGTAGAATCG
GCAGTTACGTATAAGGATGATTACTATAATGGTATGTATCGGAGGAATGA
GAAGCTTGGGGTAGGGGAATTATATTCGGATCTTGCGAAAAGCGTTAATG
AAACGAGACTAAGAAATCGATTGCGCGGGACCAGTGGTCGCCCGTACAGA
AGTCGCCGATTGAAGCGTTCCCTGCAGTCTAATGAAAAGCAGCTACCCTC
ATCTTCACAGTCAAATGAGTCTTCCATGAGCGCTCTAGCGACTGCACTCG
GTTCAGTTCAAACATGGAACCCTAAGGCCCCAAGAAGGGTTATGGACTTC
AGCTCGATTGAACGCAAAACTGGTAAAGGACATGAATCCAAGCTGCTTCG
GGACGACGAGAGAGTGAAAGTAAGACATGAGATTGAGAGAGGTTATGATA
TCATAGCTGTGATTCACGACATTGTCAGAGGAGAAAGCGGCGAAGTGTTG
GAAGACCAAATTCGTAGTCTTCTTCAAACACTACATATCGAAAGCACGGA
TGAAGAACCGCCTGATTCTGCGATCGTTGCAAACCCGGGGCTCAAATTCT
TTGGCACGCTTTGCGTGTTGGAGAAGGGCAGAAGATATCTGGCAAGAGTC
TTAGACATTCTTGACATATCTGAGCGAATTCGGGTTATTCCTTCGGTGTT
CGAAAGCTTAGGGGCCATGATATATTCTCTCCAACGCTCTCAACGTTCCA
CGTTGTCCGTGAACGGCGATATCATATCCAAGTCGCTTCAGACGATAGGC
GACTCGCACACGTCAGCGTTGGATTGCATAACAATGCTGTCTTCATTCAG
CTCAACTCATTCTGGTCGTCCTGATGCCTTTCTGACCACTTTTCGAAGCG
CTTCTGGTGCTAAGCTCATGTACTGTTGCATGCAAAGGATATCCAGGGGT
TTGTATAAAAAGGAAATAGATGAAGAGGATCTAAATCGAGCTGAAATCGA
TAAGCTCGCGGAAGTATTTACTGAAATGCTACAACGCATATTTGATGAGG
CAGAACTTGTTAACAGAGCGTGGGAAGTGACTGGAAGTCTCGACAGTATT
CTAGCTGGCGAAGCGAGATCAATGCTTCGTGCAGAGCTCAATCGACTGTT
GCAAAGTGGTGCAGCTCCCCCACCCCCAGAAGGATAG

Coding sequence (CDS) from alignment at tig00000904_pilon:328498..330834-

>Ggra10590.t1 ID=Ggra10590.t1|Name=Ggra10590.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2337bp|location=Sequence derived from alignment at tig00000904_pilon:328498..330834- (Gracilaria gracilis GNS1m male)
ATGGAAGACGACGATTACTTTGGCCACATTTCCGCACCGGGTAATGAAGA
CGAGGAAGACGCAGCTAATGACCTAACGTTTGGAGATATTGGGGACATCA
AGGCTGGTGATGATGCTTCTGATGCGGTGTGGAAACCGGATCATCAAACC
CTTTCTCGAAGAATTGAGGAGGAGAAAGAGGTTGTGCAAAGATCCCGATA
TGCATCACCGTCCTCTCAGACTACACGAAGCGATCTGTTTGAAAACCGTC
CCCCCCTGCCGCGAAGTGACCAGAACGCAGCGCCATCGGACGCGGCGTGG
AATCGTCTGCTAAAAGCTGTACAAGGACAACGAGATGCACAGCGAATGGG
CAAGCAGCACTCTTACCCTCCCCACCCTCAACAACTCTCTTTTTCAGGTT
CTCCTCCCAGCGACCATGCCTCGCAGCCAGTAACAAGTGCTCAACCGCAA
TTTCCCCAACAACCGTCTTCATTAGTGAATCCTCAGGAATACGAACGAAC
AATGATTGCGTACTATGAACAACAAACACGGCAGTTGTTAATGCGCCACA
AGGAAACGGCGGAGCTTCAACTAAGAGAAGCAATTGCAGCACAGAATGCT
GGCGTTGTATTTGACAGAGCCAAGTTTGATGAACATCAAACCGCTGCGCG
CCAACGGATACTCAATGAGTTTTATACTCGTGTCAATCAGATTCGCTACC
TTGCCTGGCTTCAATCGCGTCAGCTTGGACAGCAAAACGCGCCTGTTCCG
AAACAAAGCCAAAATGTTGTGCGTGATGAACAGACGCGTGCGTTTGGTTT
TCAAGCACCAAGTCAGGAGCGCACATCAGAAAATGTGCTCAGATCTGGTC
TGTTTGGCAATGGTCACGCACAATCTTCCGTAAATCGTTCTAGCTCAAAT
CCCATGTATGCTTCAAATGGAAATTCACGGGTTCTTTCTGCGCTTCACAA
CAAGGGGGAATCCAATACTTCACGTGATCCAAGAAATGAAGCAGTGGATG
TGCGGGAGTTGGAACGCCGCTTATTGGAAGCAAGTATAGATAAGGCTTCG
GAGGCGAAACATGAACAAAACATGGGCAACAGAACCTCCGAAGGAAGACC
AGAACCTAGAAGGCATGGGAAAAAAGCAAACCGTCTGGAGTCAATGACCG
ACAAAGACCAGGAGTTGGTCTTCAGGGTGTATTTGAGGCAGGTAGAATCG
GCAGTTACGTATAAGGATGATTACTATAATGGTATGTATCGGAGGAATGA
GAAGCTTGGGGTAGGGGAATTATATTCGGATCTTGCGAAAAGCGTTAATG
AAACGAGACTAAGAAATCGATTGCGCGGGACCAGTGGTCGCCCGTACAGA
AGTCGCCGATTGAAGCGTTCCCTGCAGTCTAATGAAAAGCAGCTACCCTC
ATCTTCACAGTCAAATGAGTCTTCCATGAGCGCTCTAGCGACTGCACTCG
GTTCAGTTCAAACATGGAACCCTAAGGCCCCAAGAAGGGTTATGGACTTC
AGCTCGATTGAACGCAAAACTGGTAAAGGACATGAATCCAAGCTGCTTCG
GGACGACGAGAGAGTGAAAGTAAGACATGAGATTGAGAGAGGTTATGATA
TCATAGCTGTGATTCACGACATTGTCAGAGGAGAAAGCGGCGAAGTGTTG
GAAGACCAAATTCGTAGTCTTCTTCAAACACTACATATCGAAAGCACGGA
TGAAGAACCGCCTGATTCTGCGATCGTTGCAAACCCGGGGCTCAAATTCT
TTGGCACGCTTTGCGTGTTGGAGAAGGGCAGAAGATATCTGGCAAGAGTC
TTAGACATTCTTGACATATCTGAGCGAATTCGGGTTATTCCTTCGGTGTT
CGAAAGCTTAGGGGCCATGATATATTCTCTCCAACGCTCTCAACGTTCCA
CGTTGTCCGTGAACGGCGATATCATATCCAAGTCGCTTCAGACGATAGGC
GACTCGCACACGTCAGCGTTGGATTGCATAACAATGCTGTCTTCATTCAG
CTCAACTCATTCTGGTCGTCCTGATGCCTTTCTGACCACTTTTCGAAGCG
CTTCTGGTGCTAAGCTCATGTACTGTTGCATGCAAAGGATATCCAGGGGT
TTGTATAAAAAGGAAATAGATGAAGAGGATCTAAATCGAGCTGAAATCGA
TAAGCTCGCGGAAGTATTTACTGAAATGCTACAACGCATATTTGATGAGG
CAGAACTTGTTAACAGAGCGTGGGAAGTGACTGGAAGTCTCGACAGTATT
CTAGCTGGCGAAGCGAGATCAATGCTTCGTGCAGAGCTCAATCGACTGTT
GCAAAGTGGTGCAGCTCCCCCACCCCCAGAAGGATAG