Ggra10578.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra10578.t1
Unique Name	Ggra10578.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	350

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000904_pilon:302396..303445-
coding sequence from alignment at tig00000904_pilon:302396..303445-

mRNA sequence

>Ggra10578.t1 ID=Ggra10578.t1|Name=Ggra10578.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=350bp
MALHRTHAFWALLWLVMFAVALSVNLVQFPSYEQVQCEQKSDLSSTVVKR
EPPDSNRRSICVWTANVTVTQDSAMFDTEARTKRTPCDQPPVVFRQCWLS
ESNHTFLPIDMDDANEYEQAARVFSRLRLAFVVFAVFFASFFFYVILRSF
DARLFSCCHSTFSSRNDARSTADNEPYVRRPSSNFSVTTSRHDIIMPSST
LQHRITLFIQQHSMTADQVKQIAHEQWTCCICLEQVAEAPRLPHIVRLSC
SHAIHAECLRMWLSKGRAVCCICNAPVFSASLLDCNDSVVPSSPSFADNR
PTDSLIVEITDYSPSSPATSDIVQTSQPQSDSFPVQPNSARDDHSSAIV*

spliced messenger RNA

>Ggra10578.t1 ID=Ggra10578.t1|Name=Ggra10578.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000904_pilon:302396..303445- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTTGCACCGTACTCACGCCTTCTGGGCGCTGCTCTGGCTCGTCAT
GTTCGCCGTCGCCCTGTCCGTCAACCTCGTGCAGTTCCCGTCCTACGAGC
AGGTGCAATGCGAGCAGAAGAGTGACCTCAGTTCCACCGTTGTCAAGAGA
GAGCCGCCCGACTCGAACCGCCGTAGCATCTGCGTGTGGACCGCAAACGT
CACCGTCACGCAGGACAGCGCCATGTTCGACACCGAAGCCAGGACAAAGC
GCACTCCGTGCGATCAACCGCCCGTCGTGTTTCGCCAGTGTTGGCTTTCT
GAGTCCAATCACACCTTCCTTCCCATTGACATGGACGATGCCAACGAGTA
TGAACAAGCAGCTCGCGTTTTCTCCCGTCTGCGTCTGGCCTTCGTTGTGT
TTGCTGTTTTCTTTGCCTCCTTCTTCTTCTACGTCATTCTTCGCTCCTTC
GATGCACGCCTGTTTAGTTGCTGTCACTCCACTTTTTCTTCCAGAAACGA
TGCTCGTAGCACCGCCGACAATGAGCCCTATGTGCGTCGTCCTTCGTCTA
ACTTCTCCGTTACAACTTCTCGTCATGATATCATTATGCCTTCTTCTACG
CTTCAACACCGCATCACCCTCTTTATCCAACAGCACTCCATGACTGCCGA
CCAGGTCAAACAGATTGCACATGAGCAGTGGACTTGTTGTATTTGTCTTG
AACAAGTGGCAGAAGCTCCGCGGCTGCCTCACATAGTGCGCCTCAGCTGT
TCTCATGCCATACACGCCGAGTGTCTCCGAATGTGGCTCTCTAAAGGACG
CGCTGTCTGTTGCATCTGCAACGCTCCAGTGTTCTCTGCTTCTCTATTAG
ATTGCAATGACTCTGTTGTACCAAGTTCGCCGTCCTTCGCTGACAACCGT
CCAACGGATTCTCTAATAGTTGAAATAACCGACTACTCCCCATCATCACC
TGCAACCTCTGATATAGTGCAAACCTCTCAACCACAATCCGATTCATTCC
CTGTTCAACCCAACTCTGCACGAGATGATCACTCATCTGCCATTGTTTGA

protein sequence of Ggra10578.t1

>Ggra10578.t1 ID=Ggra10578.t1|Name=Ggra10578.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MALHRTHAFWALLWLVMFAVALSVNLVQFPSYEQVQCEQKSDLSSTVVKR
EPPDSNRRSICVWTANVTVTQDSAMFDTEARTKRTPCDQPPVVFRQCWLS
ESNHTFLPIDMDDANEYEQAARVFSRLRLAFVVFAVFFASFFFYVILRSF
DARLFSCCHSTFSSRNDARSTADNEPYVRRPSSNFSVTTSRHDIIMPSST
LQHRITLFIQQHSMTADQVKQIAHEQWTCCICLEQVAEAPRLPHIVRLSC
SHAIHAECLRMWLSKGRAVCCICNAPVFSASLLDCNDSVVPSSPSFADNR
PTDSLIVEITDYSPSSPATSDIVQTSQPQSDSFPVQPNSARDDHSSAIV*

mRNA from alignment at tig00000904_pilon:302396..303445-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra10578.t1 ID=Ggra10578.t1|Name=Ggra10578.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000904_pilon:302396..303445- (Gracilaria gracilis GNS1m male)
ATGGCTTTGCACCGTACTCACGCCTTCTGGGCGCTGCTCTGGCTCGTCAT
GTTCGCCGTCGCCCTGTCCGTCAACCTCGTGCAGTTCCCGTCCTACGAGC
AGGTGCAATGCGAGCAGAAGAGTGACCTCAGTTCCACCGTTGTCAAGAGA
GAGCCGCCCGACTCGAACCGCCGTAGCATCTGCGTGTGGACCGCAAACGT
CACCGTCACGCAGGACAGCGCCATGTTCGACACCGAAGCCAGGACAAAGC
GCACTCCGTGCGATCAACCGCCCGTCGTGTTTCGCCAGTGTTGGCTTTCT
GAGTCCAATCACACCTTCCTTCCCATTGACATGGACGATGCCAACGAGTA
TGAACAAGCAGCTCGCGTTTTCTCCCGTCTGCGTCTGGCCTTCGTTGTGT
TTGCTGTTTTCTTTGCCTCCTTCTTCTTCTACGTCATTCTTCGCTCCTTC
GATGCACGCCTGTTTAGTTGCTGTCACTCCACTTTTTCTTCCAGAAACGA
TGCTCGTAGCACCGCCGACAATGAGCCCTATGTGCGTCGTCCTTCGTCTA
ACTTCTCCGTTACAACTTCTCGTCATGATATCATTATGCCTTCTTCTACG
CTTCAACACCGCATCACCCTCTTTATCCAACAGCACTCCATGACTGCCGA
CCAGGTCAAACAGATTGCACATGAGCAGTGGACTTGTTGTATTTGTCTTG
AACAAGTGGCAGAAGCTCCGCGGCTGCCTCACATAGTGCGCCTCAGCTGT
TCTCATGCCATACACGCCGAGTGTCTCCGAATGTGGCTCTCTAAAGGACG
CGCTGTCTGTTGCATCTGCAACGCTCCAGTGTTCTCTGCTTCTCTATTAG
ATTGCAATGACTCTGTTGTACCAAGTTCGCCGTCCTTCGCTGACAACCGT
CCAACGGATTCTCTAATAGTTGAAATAACCGACTACTCCCCATCATCACC
TGCAACCTCTGATATAGTGCAAACCTCTCAACCACAATCCGATTCATTCC
CTGTTCAACCCAACTCTGCACGAGATGATCACTCATCTGCCATTGTTTGA

Coding sequence (CDS) from alignment at tig00000904_pilon:302396..303445-

>Ggra10578.t1 ID=Ggra10578.t1|Name=Ggra10578.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1050bp|location=Sequence derived from alignment at tig00000904_pilon:302396..303445- (Gracilaria gracilis GNS1m male)
ATGGCTTTGCACCGTACTCACGCCTTCTGGGCGCTGCTCTGGCTCGTCAT
GTTCGCCGTCGCCCTGTCCGTCAACCTCGTGCAGTTCCCGTCCTACGAGC
AGGTGCAATGCGAGCAGAAGAGTGACCTCAGTTCCACCGTTGTCAAGAGA
GAGCCGCCCGACTCGAACCGCCGTAGCATCTGCGTGTGGACCGCAAACGT
CACCGTCACGCAGGACAGCGCCATGTTCGACACCGAAGCCAGGACAAAGC
GCACTCCGTGCGATCAACCGCCCGTCGTGTTTCGCCAGTGTTGGCTTTCT
GAGTCCAATCACACCTTCCTTCCCATTGACATGGACGATGCCAACGAGTA
TGAACAAGCAGCTCGCGTTTTCTCCCGTCTGCGTCTGGCCTTCGTTGTGT
TTGCTGTTTTCTTTGCCTCCTTCTTCTTCTACGTCATTCTTCGCTCCTTC
GATGCACGCCTGTTTAGTTGCTGTCACTCCACTTTTTCTTCCAGAAACGA
TGCTCGTAGCACCGCCGACAATGAGCCCTATGTGCGTCGTCCTTCGTCTA
ACTTCTCCGTTACAACTTCTCGTCATGATATCATTATGCCTTCTTCTACG
CTTCAACACCGCATCACCCTCTTTATCCAACAGCACTCCATGACTGCCGA
CCAGGTCAAACAGATTGCACATGAGCAGTGGACTTGTTGTATTTGTCTTG
AACAAGTGGCAGAAGCTCCGCGGCTGCCTCACATAGTGCGCCTCAGCTGT
TCTCATGCCATACACGCCGAGTGTCTCCGAATGTGGCTCTCTAAAGGACG
CGCTGTCTGTTGCATCTGCAACGCTCCAGTGTTCTCTGCTTCTCTATTAG
ATTGCAATGACTCTGTTGTACCAAGTTCGCCGTCCTTCGCTGACAACCGT
CCAACGGATTCTCTAATAGTTGAAATAACCGACTACTCCCCATCATCACC
TGCAACCTCTGATATAGTGCAAACCTCTCAACCACAATCCGATTCATTCC
CTGTTCAACCCAACTCTGCACGAGATGATCACTCATCTGCCATTGTTTGA