Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 4792.ETI35387 |
| PFAMs | PhoD,Pkinase,SAM_2,zf-B_box |
| Max annot lvl | 4776|Peronosporales |
| Evalue | 9.87e-50 |
| EggNOG OGs | KOG0581@1|root,KOG0581@2759|Eukaryota,3QB9K@4776|Peronosporales |
| Description | MAP kinase kinase activity |
| COG category | T |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10577.t1.stop1 | Ggra10577.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000904_pilon 299830..299832 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10577.t1.start1 | Ggra10577.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000904_pilon 301858..301860 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10577.t1 ID=Ggra10577.t1|Name=Ggra10577.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=677bp
MGLFSRKASSRNIGQSERSNHGTSLPRKNSSKHKSKLNDLFSDGKSNNEM
PGTPVTDATCFDEVISAPTVALDDFVQESKASSGTEASAPVSPNFDRDRS
CNLSDRRDRDRGNSATSNQDRTMQMSDLARRNTIKRSVSRKIARSESRRQ
LLNIGDSSLNDDRVTNAAMNRSPSGLLSKRASVNRGLDRSSSKRVIVNEK
KFSVPMSRSSSFSARVRALDTKDQTSSEVKVDDTLSAMGVMALTDDVDEE
LELSHTSLRNFSRMEDPKDNKVGDVVAGHQDVGIPGDTSRQLSENQNHKS
VKARKRPPPLLAKEEVKSVTDSTTDWPSGGFFGSDGGFVTGGFHITAEGM
LDKPLSVTRQDSDEDEDGGVPQSHRVIVIAKGLKELRTGPTIGAGAAGRV
YIAEHIPSKTRMAMKVVNVYDKHRRNQLLKELETLSTHISRYLVRFYGAF
YDGSGAVHIALEYMDHGCLATFVQRVGPIPERVVQMIAHDCVKGLRFLHR
HHVLHRDFKTANILLSRRLCRAKLSDFGLARDLNPGVSKVDTFVGTVAYM
SPERLNGSQYTYASDIWALGVSIMECLLGKYPFDRPQNYFDYIEATMTIN
VLSGFKRECAKFSPEVRDFVERCTYTDPKERATVAELMEHPWLKGTTRDT
ELFGSWLDECRIISMRPTRSQTAGRK* back to topspliced messenger RNA >Ggra10577.t1 ID=Ggra10577.t1|Name=Ggra10577.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000904_pilon:299830..301860- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGTCTGTTCAGTCGTAAGGCTTCGTCGAGAAACATTGGGCAGTCAGA
AAGAAGTAATCATGGTACAAGTTTACCGCGAAAGAATTCCTCGAAGCACA
AGTCGAAACTGAATGATTTGTTTTCTGATGGTAAATCGAACAATGAAATG
CCTGGAACGCCAGTGACTGATGCTACTTGTTTTGATGAAGTGATTTCAGC
GCCAACTGTTGCGTTAGATGACTTTGTTCAAGAATCAAAAGCATCGTCAG
GTACGGAAGCTTCTGCGCCTGTGAGTCCAAATTTTGATCGAGACAGAAGT
TGCAACCTTTCTGATCGAAGGGATAGAGACCGTGGAAATTCAGCTACTTC
TAACCAAGACCGAACGATGCAAATGTCAGACCTGGCAAGGCGTAACACGA
TCAAACGTTCTGTATCGAGAAAGATTGCACGGTCCGAAAGCCGTCGGCAA
CTACTGAATATAGGGGACAGCAGTCTGAACGACGACCGTGTTACTAATGC
CGCGATGAATCGTTCGCCATCGGGCTTGCTATCAAAACGCGCTTCTGTGA
ACCGCGGTCTGGACCGCTCAAGCTCTAAAAGAGTCATTGTGAACGAGAAG
AAGTTTTCTGTACCAATGTCAAGATCAAGTTCATTCTCTGCACGCGTTCG
AGCCCTGGATACAAAGGACCAAACTTCTTCAGAAGTGAAAGTAGACGACA
CTTTGAGTGCAATGGGTGTTATGGCGCTGACAGATGATGTTGACGAGGAA
CTTGAACTCAGTCATACCAGTTTGCGTAACTTTTCGAGAATGGAGGACCC
GAAGGACAACAAGGTTGGGGATGTTGTTGCAGGTCATCAGGATGTCGGTA
TCCCCGGCGATACTTCTAGACAACTTTCCGAAAACCAAAACCACAAATCT
GTGAAGGCCAGGAAGCGACCTCCCCCTCTCCTGGCAAAAGAAGAAGTGAA
ATCAGTAACGGATTCCACAACCGATTGGCCGAGCGGAGGGTTCTTCGGAA
GTGATGGAGGCTTCGTCACTGGTGGCTTCCATATTACCGCCGAGGGAATG
CTTGACAAACCGCTTTCTGTGACACGTCAGGATTCAGACGAGGACGAAGA
TGGTGGAGTTCCTCAGTCGCATCGCGTGATTGTTATAGCAAAGGGCCTGA
AAGAATTGCGAACTGGTCCTACTATAGGCGCAGGCGCCGCCGGAAGGGTG
TACATCGCAGAGCATATACCTTCCAAAACCAGAATGGCAATGAAAGTAGT
GAATGTGTACGACAAGCATCGCCGAAACCAACTGTTGAAGGAACTTGAAA
CTCTCTCTACTCACATCAGTCGATATCTTGTTAGATTTTATGGTGCGTTC
TATGACGGTTCGGGGGCTGTACATATTGCTCTCGAGTACATGGATCATGG
TTGCCTAGCCACATTTGTTCAGCGTGTTGGACCAATTCCTGAAAGAGTTG
TGCAGATGATAGCTCACGACTGCGTGAAAGGTCTCCGGTTCTTGCATAGA
CATCATGTGCTTCACCGTGACTTTAAGACAGCCAATATACTTTTGTCCCG
ACGACTGTGCAGGGCGAAGCTCAGCGACTTTGGCCTGGCTCGAGATTTGA
ATCCAGGTGTTTCAAAGGTTGATACCTTTGTTGGAACTGTGGCGTACATG
TCACCGGAACGACTAAATGGCAGCCAGTATACGTATGCTTCGGATATTTG
GGCCCTTGGAGTGTCTATCATGGAATGCCTCTTGGGCAAGTACCCTTTTG
ATCGTCCTCAAAACTACTTTGATTACATTGAGGCCACGATGACAATCAAC
GTACTAAGTGGTTTTAAGAGGGAGTGTGCTAAGTTTTCTCCAGAAGTCCG
AGACTTCGTCGAAAGATGTACCTACACTGACCCGAAAGAAAGAGCCACAG
TAGCAGAGCTTATGGAACACCCATGGTTGAAGGGAACAACTAGAGACACC
GAACTATTTGGTTCGTGGTTGGATGAGTGTCGAATAATATCGATGCGCCC
TACACGTTCGCAGACGGCTGGAAGAAAGTAA back to topprotein sequence of Ggra10577.t1 >Ggra10577.t1 ID=Ggra10577.t1|Name=Ggra10577.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MGLFSRKASSRNIGQSERSNHGTSLPRKNSSKHKSKLNDLFSDGKSNNEM
PGTPVTDATCFDEVISAPTVALDDFVQESKASSGTEASAPVSPNFDRDRS
CNLSDRRDRDRGNSATSNQDRTMQMSDLARRNTIKRSVSRKIARSESRRQ
LLNIGDSSLNDDRVTNAAMNRSPSGLLSKRASVNRGLDRSSSKRVIVNEK
KFSVPMSRSSSFSARVRALDTKDQTSSEVKVDDTLSAMGVMALTDDVDEE
LELSHTSLRNFSRMEDPKDNKVGDVVAGHQDVGIPGDTSRQLSENQNHKS
VKARKRPPPLLAKEEVKSVTDSTTDWPSGGFFGSDGGFVTGGFHITAEGM
LDKPLSVTRQDSDEDEDGGVPQSHRVIVIAKGLKELRTGPTIGAGAAGRV
YIAEHIPSKTRMAMKVVNVYDKHRRNQLLKELETLSTHISRYLVRFYGAF
YDGSGAVHIALEYMDHGCLATFVQRVGPIPERVVQMIAHDCVKGLRFLHR
HHVLHRDFKTANILLSRRLCRAKLSDFGLARDLNPGVSKVDTFVGTVAYM
SPERLNGSQYTYASDIWALGVSIMECLLGKYPFDRPQNYFDYIEATMTIN
VLSGFKRECAKFSPEVRDFVERCTYTDPKERATVAELMEHPWLKGTTRDT
ELFGSWLDECRIISMRPTRSQTAGRK* back to topmRNA from alignment at tig00000904_pilon:299830..301860- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10577.t1 ID=Ggra10577.t1|Name=Ggra10577.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000904_pilon:299830..301860- (Gracilaria gracilis GNS1m male)
ATGGGTCTGTTCAGTCGTAAGGCTTCGTCGAGAAACATTGGGCAGTCAGA
AAGAAGTAATCATGGTACAAGTTTACCGCGAAAGAATTCCTCGAAGCACA
AGTCGAAACTGAATGATTTGTTTTCTGATGGTAAATCGAACAATGAAATG
CCTGGAACGCCAGTGACTGATGCTACTTGTTTTGATGAAGTGATTTCAGC
GCCAACTGTTGCGTTAGATGACTTTGTTCAAGAATCAAAAGCATCGTCAG
GTACGGAAGCTTCTGCGCCTGTGAGTCCAAATTTTGATCGAGACAGAAGT
TGCAACCTTTCTGATCGAAGGGATAGAGACCGTGGAAATTCAGCTACTTC
TAACCAAGACCGAACGATGCAAATGTCAGACCTGGCAAGGCGTAACACGA
TCAAACGTTCTGTATCGAGAAAGATTGCACGGTCCGAAAGCCGTCGGCAA
CTACTGAATATAGGGGACAGCAGTCTGAACGACGACCGTGTTACTAATGC
CGCGATGAATCGTTCGCCATCGGGCTTGCTATCAAAACGCGCTTCTGTGA
ACCGCGGTCTGGACCGCTCAAGCTCTAAAAGAGTCATTGTGAACGAGAAG
AAGTTTTCTGTACCAATGTCAAGATCAAGTTCATTCTCTGCACGCGTTCG
AGCCCTGGATACAAAGGACCAAACTTCTTCAGAAGTGAAAGTAGACGACA
CTTTGAGTGCAATGGGTGTTATGGCGCTGACAGATGATGTTGACGAGGAA
CTTGAACTCAGTCATACCAGTTTGCGTAACTTTTCGAGAATGGAGGACCC
GAAGGACAACAAGGTTGGGGATGTTGTTGCAGGTCATCAGGATGTCGGTA
TCCCCGGCGATACTTCTAGACAACTTTCCGAAAACCAAAACCACAAATCT
GTGAAGGCCAGGAAGCGACCTCCCCCTCTCCTGGCAAAAGAAGAAGTGAA
ATCAGTAACGGATTCCACAACCGATTGGCCGAGCGGAGGGTTCTTCGGAA
GTGATGGAGGCTTCGTCACTGGTGGCTTCCATATTACCGCCGAGGGAATG
CTTGACAAACCGCTTTCTGTGACACGTCAGGATTCAGACGAGGACGAAGA
TGGTGGAGTTCCTCAGTCGCATCGCGTGATTGTTATAGCAAAGGGCCTGA
AAGAATTGCGAACTGGTCCTACTATAGGCGCAGGCGCCGCCGGAAGGGTG
TACATCGCAGAGCATATACCTTCCAAAACCAGAATGGCAATGAAAGTAGT
GAATGTGTACGACAAGCATCGCCGAAACCAACTGTTGAAGGAACTTGAAA
CTCTCTCTACTCACATCAGTCGATATCTTGTTAGATTTTATGGTGCGTTC
TATGACGGTTCGGGGGCTGTACATATTGCTCTCGAGTACATGGATCATGG
TTGCCTAGCCACATTTGTTCAGCGTGTTGGACCAATTCCTGAAAGAGTTG
TGCAGATGATAGCTCACGACTGCGTGAAAGGTCTCCGGTTCTTGCATAGA
CATCATGTGCTTCACCGTGACTTTAAGACAGCCAATATACTTTTGTCCCG
ACGACTGTGCAGGGCGAAGCTCAGCGACTTTGGCCTGGCTCGAGATTTGA
ATCCAGGTGTTTCAAAGGTTGATACCTTTGTTGGAACTGTGGCGTACATG
TCACCGGAACGACTAAATGGCAGCCAGTATACGTATGCTTCGGATATTTG
GGCCCTTGGAGTGTCTATCATGGAATGCCTCTTGGGCAAGTACCCTTTTG
ATCGTCCTCAAAACTACTTTGATTACATTGAGGCCACGATGACAATCAAC
GTACTAAGTGGTTTTAAGAGGGAGTGTGCTAAGTTTTCTCCAGAAGTCCG
AGACTTCGTCGAAAGATGTACCTACACTGACCCGAAAGAAAGAGCCACAG
TAGCAGAGCTTATGGAACACCCATGGTTGAAGGGAACAACTAGAGACACC
GAACTATTTGGTTCGTGGTTGGATGAGTGTCGAATAATATCGATGCGCCC
TACACGTTCGCAGACGGCTGGAAGAAAGTAA back to topCoding sequence (CDS) from alignment at tig00000904_pilon:299830..301860- >Ggra10577.t1 ID=Ggra10577.t1|Name=Ggra10577.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2031bp|location=Sequence derived from alignment at tig00000904_pilon:299830..301860- (Gracilaria gracilis GNS1m male)
ATGGGTCTGTTCAGTCGTAAGGCTTCGTCGAGAAACATTGGGCAGTCAGA
AAGAAGTAATCATGGTACAAGTTTACCGCGAAAGAATTCCTCGAAGCACA
AGTCGAAACTGAATGATTTGTTTTCTGATGGTAAATCGAACAATGAAATG
CCTGGAACGCCAGTGACTGATGCTACTTGTTTTGATGAAGTGATTTCAGC
GCCAACTGTTGCGTTAGATGACTTTGTTCAAGAATCAAAAGCATCGTCAG
GTACGGAAGCTTCTGCGCCTGTGAGTCCAAATTTTGATCGAGACAGAAGT
TGCAACCTTTCTGATCGAAGGGATAGAGACCGTGGAAATTCAGCTACTTC
TAACCAAGACCGAACGATGCAAATGTCAGACCTGGCAAGGCGTAACACGA
TCAAACGTTCTGTATCGAGAAAGATTGCACGGTCCGAAAGCCGTCGGCAA
CTACTGAATATAGGGGACAGCAGTCTGAACGACGACCGTGTTACTAATGC
CGCGATGAATCGTTCGCCATCGGGCTTGCTATCAAAACGCGCTTCTGTGA
ACCGCGGTCTGGACCGCTCAAGCTCTAAAAGAGTCATTGTGAACGAGAAG
AAGTTTTCTGTACCAATGTCAAGATCAAGTTCATTCTCTGCACGCGTTCG
AGCCCTGGATACAAAGGACCAAACTTCTTCAGAAGTGAAAGTAGACGACA
CTTTGAGTGCAATGGGTGTTATGGCGCTGACAGATGATGTTGACGAGGAA
CTTGAACTCAGTCATACCAGTTTGCGTAACTTTTCGAGAATGGAGGACCC
GAAGGACAACAAGGTTGGGGATGTTGTTGCAGGTCATCAGGATGTCGGTA
TCCCCGGCGATACTTCTAGACAACTTTCCGAAAACCAAAACCACAAATCT
GTGAAGGCCAGGAAGCGACCTCCCCCTCTCCTGGCAAAAGAAGAAGTGAA
ATCAGTAACGGATTCCACAACCGATTGGCCGAGCGGAGGGTTCTTCGGAA
GTGATGGAGGCTTCGTCACTGGTGGCTTCCATATTACCGCCGAGGGAATG
CTTGACAAACCGCTTTCTGTGACACGTCAGGATTCAGACGAGGACGAAGA
TGGTGGAGTTCCTCAGTCGCATCGCGTGATTGTTATAGCAAAGGGCCTGA
AAGAATTGCGAACTGGTCCTACTATAGGCGCAGGCGCCGCCGGAAGGGTG
TACATCGCAGAGCATATACCTTCCAAAACCAGAATGGCAATGAAAGTAGT
GAATGTGTACGACAAGCATCGCCGAAACCAACTGTTGAAGGAACTTGAAA
CTCTCTCTACTCACATCAGTCGATATCTTGTTAGATTTTATGGTGCGTTC
TATGACGGTTCGGGGGCTGTACATATTGCTCTCGAGTACATGGATCATGG
TTGCCTAGCCACATTTGTTCAGCGTGTTGGACCAATTCCTGAAAGAGTTG
TGCAGATGATAGCTCACGACTGCGTGAAAGGTCTCCGGTTCTTGCATAGA
CATCATGTGCTTCACCGTGACTTTAAGACAGCCAATATACTTTTGTCCCG
ACGACTGTGCAGGGCGAAGCTCAGCGACTTTGGCCTGGCTCGAGATTTGA
ATCCAGGTGTTTCAAAGGTTGATACCTTTGTTGGAACTGTGGCGTACATG
TCACCGGAACGACTAAATGGCAGCCAGTATACGTATGCTTCGGATATTTG
GGCCCTTGGAGTGTCTATCATGGAATGCCTCTTGGGCAAGTACCCTTTTG
ATCGTCCTCAAAACTACTTTGATTACATTGAGGCCACGATGACAATCAAC
GTACTAAGTGGTTTTAAGAGGGAGTGTGCTAAGTTTTCTCCAGAAGTCCG
AGACTTCGTCGAAAGATGTACCTACACTGACCCGAAAGAAAGAGCCACAG
TAGCAGAGCTTATGGAACACCCATGGTTGAAGGGAACAACTAGAGACACC
GAACTATTTGGTTCGTGGTTGGATGAGTGTCGAATAATATCGATGCGCCC
TACACGTTCGCAGACGGCTGGAAGAAAGTAA back to top
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