Ggra10564.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra10564.t1
Unique Name	Ggra10564.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	504

Properties


Property Name	Value
Seed ortholog	130081.XP_005709240.1
Preferred name	UGP2
PFAMs	UDPGP
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00002
KEGG ko	ko:K00963,ko:K02987,ko:K17260,ko:K17491
KEGG Reaction	R00289
KEGG Pathway	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,ko03010,ko04138,ko04212,ko04530,ko04922,map00040,map00052,map00500,map00520,map01100,map01130,map03010,map04138,map04212,map04530,map04922
KEGG Module	M00129,M00177,M00179,M00361,M00362,M00549
GOs	GO:0000045,GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0005515,GO:0005536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005984,GO:0005985,GO:0005991,GO:0005992,GO:0006011,GO:0006065,GO:0006073,GO:0006077,GO:0006078,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006464,GO:0006486,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0006950,GO:0006970,GO:0006996,GO:0007033,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009250,GO:0009267,GO:0009277,GO:0009311,GO:0009312,GO:0009555,GO:0009605,GO:0009628,GO:0009651,GO:0009986,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010494,GO:0010941,GO:0010942,GO:0015980,GO:0016020,GO:0016036,GO:0016043,GO:0016051,GO:0016053,GO:0016236,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019103,GO:0019255,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0022607,GO:0030243,GO:0030244,GO:0030246,GO:0030312,GO:0030445,GO:0030587,GO:0031154,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0032553,GO:0032557,GO:0032991,GO:0033036,GO:0033037,GO:0033554,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036094,GO:0036211,GO:0036296,GO:0036464,GO:0042221,GO:0042545,GO:0042594,GO:0042802,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043413,GO:0043436,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046351,GO:0046394,GO:0046398,GO:0046483,GO:0046686,GO:0048029,GO:0048229,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051273,GO:0051274,GO:0051641,GO:0051703,GO:0051704,GO:0051716,GO:0051748,GO:0052386,GO:0052543,GO:0052545,GO:0055086,GO:0055093,GO:0055114,GO:0061919,GO:0065007,GO:0070085,GO:0070482,GO:0070569,GO:0070727,GO:0070925,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0090406,GO:0090702,GO:0097159,GO:0097367,GO:0099120,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905037,GO:1990904
Evalue	7.54e-235
EggNOG OGs	COG4284@1\|root,KOG2638@2759\|Eukaryota
EC	2.7.7.9
Description	UTP:glucose-1-phosphate uridylyltransferase activity
COG category	G
BRITE	br01610,ko00000,ko00001,ko00002,ko01000,ko01009,ko03011,ko03400,ko04131,ko04147,ko04812

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000904_pilon:208394..209905+
coding sequence from alignment at tig00000904_pilon:208394..209905+

mRNA sequence

>Ggra10564.t1 ID=Ggra10564.t1|Name=Ggra10564.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=504bp
MMPNGKGAMNRDSRSLQDFKGVMDKSAASTVAEKLTVMNQMAANELEKMT
DSETTGFVELYGRYMSERSKKAEIKWDLIEQPSENMLQKYDTLPKPATDE
ELASLLSKLAVLKLNGGLGTSMGCKGPKSVIEVRDDTTFLDLIVQQIGQL
NKNHPTANVPLLLMNSFNTDSETAKIIRKYQDTSVTLTTFQQSRYPRIVK
ESLEPMPLTHDHYAHEDWYPPGHGDFFQSIYNSGLVDTLLAQGKEYIFVS
NVDNLGATVDLNILKNVVDREVEYCMELTDKTRADIKGGTIISYDGKVSL
LEVAQVPAKYVEEFKSISKFKVFNTNNIWVSLRAIKRVMQSGEMKLDIIV
NNKEVKGTKVIQLESAIGAAIGYFNNACGVNVPRSRFLPVKSTSDLMLIQ
SNMYNLKSGSLVMNPARQFTTTPVIKLGKEFKKVAQYLERLGSIPDILEL
DHLTVSGDVYFGANTTLKGTVIVVANPGNTIMIPEGSVLENKVVLGSLHV
IPH*

spliced messenger RNA

>Ggra10564.t1 ID=Ggra10564.t1|Name=Ggra10564.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1512bp|location=Sequence derived from alignment at tig00000904_pilon:208394..209905+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGCCAAACGGAAAAGGAGCCATGAATCGCGACTCCAGGTCTCTGCA
GGACTTCAAGGGCGTCATGGACAAGTCCGCCGCCTCCACCGTCGCCGAGA
AGCTCACCGTCATGAACCAGATGGCCGCCAATGAGCTCGAGAAGATGACC
GATTCTGAGACCACCGGCTTCGTCGAGTTGTACGGCCGCTACATGAGCGA
ACGTTCCAAAAAGGCCGAAATCAAGTGGGATCTCATCGAACAGCCCAGTG
AAAACATGCTGCAAAAGTACGATACCTTGCCAAAGCCGGCCACCGACGAA
GAACTCGCTTCGCTCCTTTCCAAGCTGGCTGTGCTCAAGCTCAACGGCGG
TCTTGGTACCTCCATGGGCTGCAAAGGACCCAAGAGCGTCATCGAAGTGC
GTGATGACACCACCTTCTTGGACCTCATTGTTCAGCAGATTGGTCAGCTC
AACAAGAACCATCCCACGGCCAACGTCCCCCTGCTTCTCATGAACTCTTT
CAACACCGACTCTGAGACCGCAAAGATCATTCGCAAGTACCAGGATACCA
GTGTTACCCTCACCACCTTCCAGCAATCTCGTTACCCCAGGATCGTCAAG
GAGTCTCTCGAACCGATGCCGCTCACACACGACCACTATGCCCATGAGGA
CTGGTACCCTCCAGGTCACGGAGATTTCTTCCAATCTATTTACAACTCGG
GATTGGTTGATACCCTTCTTGCGCAGGGTAAGGAGTACATCTTTGTCTCA
AACGTTGACAATCTTGGCGCCACTGTCGATCTCAACATTCTCAAGAATGT
CGTTGACCGCGAAGTCGAGTACTGCATGGAGCTCACCGACAAGACACGTG
CCGACATCAAGGGTGGTACCATTATTTCATACGACGGAAAGGTGTCTCTG
CTCGAGGTCGCTCAGGTCCCTGCCAAGTACGTTGAAGAGTTCAAGTCTAT
TTCCAAGTTTAAGGTGTTCAACACCAATAACATTTGGGTATCGTTACGAG
CAATCAAGCGCGTCATGCAATCCGGCGAGATGAAGCTTGATATCATTGTG
AACAACAAGGAAGTCAAGGGTACCAAGGTCATCCAGCTCGAAAGCGCTAT
TGGAGCAGCCATTGGCTACTTCAACAATGCGTGCGGTGTCAACGTTCCTC
GTTCCCGTTTCCTTCCTGTCAAGTCAACCTCCGATCTCATGCTCATTCAG
AGCAACATGTACAACCTTAAATCTGGCTCTCTGGTTATGAACCCTGCCCG
CCAATTTACTACAACTCCAGTGATTAAGCTTGGAAAGGAGTTTAAGAAGG
TCGCTCAATATCTTGAACGTCTGGGTAGCATCCCTGACATTTTGGAGCTT
GACCATCTCACTGTCTCAGGTGATGTCTACTTTGGGGCTAACACTACTCT
GAAAGGAACCGTTATCGTGGTAGCAAACCCTGGGAACACCATCATGATTC
CAGAAGGCTCAGTTCTCGAGAACAAGGTCGTTCTTGGTTCTCTCCATGTG
ATTCCGCATTAA

protein sequence of Ggra10564.t1

>Ggra10564.t1 ID=Ggra10564.t1|Name=Ggra10564.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=504bp
MMPNGKGAMNRDSRSLQDFKGVMDKSAASTVAEKLTVMNQMAANELEKMT
DSETTGFVELYGRYMSERSKKAEIKWDLIEQPSENMLQKYDTLPKPATDE
ELASLLSKLAVLKLNGGLGTSMGCKGPKSVIEVRDDTTFLDLIVQQIGQL
NKNHPTANVPLLLMNSFNTDSETAKIIRKYQDTSVTLTTFQQSRYPRIVK
ESLEPMPLTHDHYAHEDWYPPGHGDFFQSIYNSGLVDTLLAQGKEYIFVS
NVDNLGATVDLNILKNVVDREVEYCMELTDKTRADIKGGTIISYDGKVSL
LEVAQVPAKYVEEFKSISKFKVFNTNNIWVSLRAIKRVMQSGEMKLDIIV
NNKEVKGTKVIQLESAIGAAIGYFNNACGVNVPRSRFLPVKSTSDLMLIQ
SNMYNLKSGSLVMNPARQFTTTPVIKLGKEFKKVAQYLERLGSIPDILEL
DHLTVSGDVYFGANTTLKGTVIVVANPGNTIMIPEGSVLENKVVLGSLHV
IPH*

mRNA from alignment at tig00000904_pilon:208394..209905+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra10564.t1 ID=Ggra10564.t1|Name=Ggra10564.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1512bp|location=Sequence derived from alignment at tig00000904_pilon:208394..209905+ (Gracilaria gracilis GNS1m male)
ATGATGCCAAACGGAAAAGGAGCCATGAATCGCGACTCCAGGTCTCTGCA
GGACTTCAAGGGCGTCATGGACAAGTCCGCCGCCTCCACCGTCGCCGAGA
AGCTCACCGTCATGAACCAGATGGCCGCCAATGAGCTCGAGAAGATGACC
GATTCTGAGACCACCGGCTTCGTCGAGTTGTACGGCCGCTACATGAGCGA
ACGTTCCAAAAAGGCCGAAATCAAGTGGGATCTCATCGAACAGCCCAGTG
AAAACATGCTGCAAAAGTACGATACCTTGCCAAAGCCGGCCACCGACGAA
GAACTCGCTTCGCTCCTTTCCAAGCTGGCTGTGCTCAAGCTCAACGGCGG
TCTTGGTACCTCCATGGGCTGCAAAGGACCCAAGAGCGTCATCGAAGTGC
GTGATGACACCACCTTCTTGGACCTCATTGTTCAGCAGATTGGTCAGCTC
AACAAGAACCATCCCACGGCCAACGTCCCCCTGCTTCTCATGAACTCTTT
CAACACCGACTCTGAGACCGCAAAGATCATTCGCAAGTACCAGGATACCA
GTGTTACCCTCACCACCTTCCAGCAATCTCGTTACCCCAGGATCGTCAAG
GAGTCTCTCGAACCGATGCCGCTCACACACGACCACTATGCCCATGAGGA
CTGGTACCCTCCAGGTCACGGAGATTTCTTCCAATCTATTTACAACTCGG
GATTGGTTGATACCCTTCTTGCGCAGGGTAAGGAGTACATCTTTGTCTCA
AACGTTGACAATCTTGGCGCCACTGTCGATCTCAACATTCTCAAGAATGT
CGTTGACCGCGAAGTCGAGTACTGCATGGAGCTCACCGACAAGACACGTG
CCGACATCAAGGGTGGTACCATTATTTCATACGACGGAAAGGTGTCTCTG
CTCGAGGTCGCTCAGGTCCCTGCCAAGTACGTTGAAGAGTTCAAGTCTAT
TTCCAAGTTTAAGGTGTTCAACACCAATAACATTTGGGTATCGTTACGAG
CAATCAAGCGCGTCATGCAATCCGGCGAGATGAAGCTTGATATCATTGTG
AACAACAAGGAAGTCAAGGGTACCAAGGTCATCCAGCTCGAAAGCGCTAT
TGGAGCAGCCATTGGCTACTTCAACAATGCGTGCGGTGTCAACGTTCCTC
GTTCCCGTTTCCTTCCTGTCAAGTCAACCTCCGATCTCATGCTCATTCAG
AGCAACATGTACAACCTTAAATCTGGCTCTCTGGTTATGAACCCTGCCCG
CCAATTTACTACAACTCCAGTGATTAAGCTTGGAAAGGAGTTTAAGAAGG
TCGCTCAATATCTTGAACGTCTGGGTAGCATCCCTGACATTTTGGAGCTT
GACCATCTCACTGTCTCAGGTGATGTCTACTTTGGGGCTAACACTACTCT
GAAAGGAACCGTTATCGTGGTAGCAAACCCTGGGAACACCATCATGATTC
CAGAAGGCTCAGTTCTCGAGAACAAGGTCGTTCTTGGTTCTCTCCATGTG
ATTCCGCATTAA

Coding sequence (CDS) from alignment at tig00000904_pilon:208394..209905+

>Ggra10564.t1 ID=Ggra10564.t1|Name=Ggra10564.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1512bp|location=Sequence derived from alignment at tig00000904_pilon:208394..209905+ (Gracilaria gracilis GNS1m male)
ATGATGCCAAACGGAAAAGGAGCCATGAATCGCGACTCCAGGTCTCTGCA
GGACTTCAAGGGCGTCATGGACAAGTCCGCCGCCTCCACCGTCGCCGAGA
AGCTCACCGTCATGAACCAGATGGCCGCCAATGAGCTCGAGAAGATGACC
GATTCTGAGACCACCGGCTTCGTCGAGTTGTACGGCCGCTACATGAGCGA
ACGTTCCAAAAAGGCCGAAATCAAGTGGGATCTCATCGAACAGCCCAGTG
AAAACATGCTGCAAAAGTACGATACCTTGCCAAAGCCGGCCACCGACGAA
GAACTCGCTTCGCTCCTTTCCAAGCTGGCTGTGCTCAAGCTCAACGGCGG
TCTTGGTACCTCCATGGGCTGCAAAGGACCCAAGAGCGTCATCGAAGTGC
GTGATGACACCACCTTCTTGGACCTCATTGTTCAGCAGATTGGTCAGCTC
AACAAGAACCATCCCACGGCCAACGTCCCCCTGCTTCTCATGAACTCTTT
CAACACCGACTCTGAGACCGCAAAGATCATTCGCAAGTACCAGGATACCA
GTGTTACCCTCACCACCTTCCAGCAATCTCGTTACCCCAGGATCGTCAAG
GAGTCTCTCGAACCGATGCCGCTCACACACGACCACTATGCCCATGAGGA
CTGGTACCCTCCAGGTCACGGAGATTTCTTCCAATCTATTTACAACTCGG
GATTGGTTGATACCCTTCTTGCGCAGGGTAAGGAGTACATCTTTGTCTCA
AACGTTGACAATCTTGGCGCCACTGTCGATCTCAACATTCTCAAGAATGT
CGTTGACCGCGAAGTCGAGTACTGCATGGAGCTCACCGACAAGACACGTG
CCGACATCAAGGGTGGTACCATTATTTCATACGACGGAAAGGTGTCTCTG
CTCGAGGTCGCTCAGGTCCCTGCCAAGTACGTTGAAGAGTTCAAGTCTAT
TTCCAAGTTTAAGGTGTTCAACACCAATAACATTTGGGTATCGTTACGAG
CAATCAAGCGCGTCATGCAATCCGGCGAGATGAAGCTTGATATCATTGTG
AACAACAAGGAAGTCAAGGGTACCAAGGTCATCCAGCTCGAAAGCGCTAT
TGGAGCAGCCATTGGCTACTTCAACAATGCGTGCGGTGTCAACGTTCCTC
GTTCCCGTTTCCTTCCTGTCAAGTCAACCTCCGATCTCATGCTCATTCAG
AGCAACATGTACAACCTTAAATCTGGCTCTCTGGTTATGAACCCTGCCCG
CCAATTTACTACAACTCCAGTGATTAAGCTTGGAAAGGAGTTTAAGAAGG
TCGCTCAATATCTTGAACGTCTGGGTAGCATCCCTGACATTTTGGAGCTT
GACCATCTCACTGTCTCAGGTGATGTCTACTTTGGGGCTAACACTACTCT
GAAAGGAACCGTTATCGTGGTAGCAAACCCTGGGAACACCATCATGATTC
CAGAAGGCTCAGTTCTCGAGAACAAGGTCGTTCTTGGTTCTCTCCATGTG
ATTCCGCATTAA