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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 130081.XP_005709134.1 |
| PFAMs | Ank_2,Asparaginase,Pkinase,Pkinase_Tyr |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00010,RC02798 |
| KEGG ko | ko:K01424,ko:K13278 |
| KEGG Reaction | R00485 |
| KEGG Pathway | ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 |
| Evalue | 9.45e-87 |
| EggNOG OGs | COG0252@1|root,COG0515@1|root,KOG0192@2759|Eukaryota,KOG0503@2759|Eukaryota |
| EC | 3.1.1.47,3.1.1.5,3.5.1.1 |
| Description | asparagine catabolic process |
| COG category | EJ |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10559.t1.start1 | Ggra10559.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000904_pilon 184142..184144 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10559.t1.stop1 | Ggra10559.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000904_pilon 186915..186917 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10559.t1 ID=Ggra10559.t1|Name=Ggra10559.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=850bp
MGNNFTKHANPPPSRSHDEDGARLLGLRNNLKQTEIETLIDYYKSMDPNN
EGLLLEQFKKATGNFFATELTVDPKLVFNIFDTADGGVRGRVTLREFILG
YAILCRGTTESRLKYLFSIYDNSQDGKGYLSRDQLCSALTLMQRIASELT
DTVEQLDAQQNEMRIQHVADQIIADSSDPKNEAISYADFIEQLKSDDNVT
EWLDDLQSAAGEHLKYIEKRELDLAQLNMERNGLVQAEASPRAHARMDWN
PDSSTPSSSSSGKRPRIPKPKKQKLVRRDLKHPRFELLRAASRKEDADDE
AHEDLNAAMPFIINYDDIKFGKILGRGACATVYECQWMHVPVAVKVFKDG
HGDAAGVDKLSTSVEESRKDVVGDYVEEFWLLLQIRHPNCLLYMGICFEP
VVCIVTELYTGGSVANYLHGPNPRRLTPQKAVEMLCGVARGMYYLHASSP
PILHRDLKTSNILINQALTHCVICDFGLSRQFVSNASGVHLSSSGRPAKG
GIVGTPYTMAPEIMELKPYTPAADVYSFGIVMYEMYTGRFPFAKKTPIQV
MFHVVEGNRPAFYEEDRVPKILEDLIKKCWAQNPADRPSFEEILAILTSN
TLGAELSDRQTVSTRQQNRLGSPDEEADEDDLSKRLLEAVYRGQTELVGQ
LIDRGAKVNYSDYDKRTALHVAAAEGRTACIRLLISAGARLSFDRWNNSP
LVDAMNYANRAGDSEPIRLLRSIEGRISGHVERSGVLDSHHKETLLNQAA
MVAAADGDVDSMSRLVMTGLDVNCCDYDRRTPLMVAASEGRHDIVQFLLD
NGADMDHRDRWGSTAIHEAERGGYHDILQLLTSAEKGVPETSSAAMSLS* back to topspliced messenger RNA >Ggra10559.t1 ID=Ggra10559.t1|Name=Ggra10559.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2550bp|location=Sequence derived from alignment at tig00000904_pilon:184142..186917+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCAATAACTTCACCAAGCATGCCAATCCTCCGCCTTCACGCTCTCA
CGATGAAGATGGCGCCCGTCTGCTCGGCCTGCGGAACAACTTGAAGCAAA
CTGAGATTGAAACCCTCATCGACTACTATAAGAGCATGGACCCCAACAAT
GAAGGTTTGCTTCTGGAGCAGTTTAAGAAAGCCACCGGAAACTTCTTTGC
CACCGAGCTCACCGTAGACCCTAAACTCGTGTTCAACATTTTCGATACTG
CAGACGGCGGAGTGCGAGGGCGCGTTACGCTTCGTGAGTTCATCTTGGGT
TATGCTATACTGTGTCGCGGCACCACAGAAAGTCGTCTCAAGTATTTATT
TTCCATATATGATAATTCTCAAGATGGAAAGGGCTATCTCTCGAGAGACC
AATTATGCAGCGCGTTAACGCTTATGCAGAGAATCGCCTCTGAGCTCACG
GATACAGTCGAACAGCTCGACGCCCAGCAAAATGAAATGCGAATCCAACA
TGTCGCCGACCAGATCATAGCCGACTCCTCAGATCCGAAGAACGAGGCCA
TTTCATATGCTGACTTTATCGAACAATTGAAGAGCGATGATAATGTCACT
GAATGGCTTGATGATTTGCAATCAGCCGCTGGTGAGCACTTGAAGTACAT
TGAAAAACGTGAACTTGACCTTGCCCAACTTAATATGGAGAGAAATGGTC
TTGTTCAGGCCGAAGCTTCTCCCCGTGCTCACGCCCGTATGGATTGGAAC
CCGGATTCTTCTACCCCCTCGTCCTCCAGCTCTGGAAAGCGACCTCGCAT
CCCCAAGCCCAAAAAGCAGAAGCTGGTTCGACGCGATTTGAAACACCCTC
GCTTCGAATTGCTGCGTGCTGCCTCTCGGAAAGAAGACGCTGATGATGAA
GCACATGAAGATTTAAATGCCGCCATGCCCTTTATCATCAATTATGACGA
CATCAAGTTTGGCAAGATTCTCGGAAGGGGTGCTTGTGCCACTGTGTATG
AGTGTCAGTGGATGCACGTCCCTGTAGCCGTCAAGGTTTTCAAGGATGGA
CATGGCGATGCCGCCGGTGTGGACAAACTCTCCACTTCTGTTGAAGAGAG
TCGAAAAGATGTTGTTGGTGATTACGTTGAGGAGTTCTGGTTGCTTTTGC
AAATACGACATCCAAACTGCTTACTCTACATGGGTATATGTTTTGAACCG
GTGGTCTGTATTGTAACAGAGTTGTACACGGGTGGTTCGGTAGCCAATTA
TCTACATGGCCCGAACCCTCGCCGCCTCACTCCACAGAAGGCAGTTGAAA
TGCTTTGTGGAGTCGCTCGTGGCATGTATTACCTTCATGCCTCCTCCCCA
CCAATTTTGCACAGAGACTTGAAAACAAGTAACATTCTTATCAACCAAGC
ACTAACTCACTGTGTGATTTGTGACTTTGGCCTTAGTCGGCAGTTCGTCA
GCAATGCTTCTGGTGTGCATCTTAGTTCTTCAGGGAGACCGGCAAAGGGG
GGTATAGTTGGAACACCATACACAATGGCACCGGAGATAATGGAGCTCAA
ACCGTACACTCCAGCTGCCGATGTGTATTCGTTTGGAATTGTGATGTACG
AGATGTACACCGGTAGGTTTCCGTTTGCTAAGAAGACGCCTATACAAGTC
ATGTTTCATGTTGTCGAAGGGAACAGGCCAGCCTTCTACGAGGAAGATCG
AGTGCCCAAGATCCTTGAGGACCTCATCAAGAAATGCTGGGCGCAAAACC
CTGCCGATAGACCAAGTTTTGAGGAGATTCTGGCTATACTTACGAGCAAT
ACACTTGGGGCGGAACTGTCGGATAGACAGACAGTGTCCACCAGACAACA
AAACCGATTGGGATCTCCAGATGAGGAAGCAGATGAAGATGATCTTTCTA
AGCGACTGCTTGAAGCTGTGTACAGAGGGCAAACGGAGTTAGTTGGACAG
TTGATTGACAGGGGTGCGAAGGTGAACTACTCTGACTATGACAAACGAAC
CGCTCTTCATGTTGCTGCCGCTGAAGGGCGTACGGCATGCATAAGACTTT
TGATTTCTGCAGGCGCGAGACTGTCCTTCGACAGATGGAACAACTCGCCT
CTCGTTGACGCTATGAACTACGCCAATCGAGCTGGCGATAGTGAACCTAT
CCGACTGCTGAGGTCTATCGAAGGCAGGATCTCTGGCCATGTCGAAAGAT
CTGGCGTTCTCGACTCTCATCACAAGGAGACTTTGTTGAATCAAGCTGCG
ATGGTCGCAGCGGCTGATGGTGATGTGGATAGCATGTCAAGGCTTGTCAT
GACAGGGTTAGATGTGAACTGTTGTGATTATGATCGCCGCACACCGCTGA
TGGTGGCTGCTTCTGAGGGACGTCACGACATTGTGCAGTTTTTGCTTGAT
AACGGTGCTGATATGGATCATCGTGACAGATGGGGTTCAACCGCGATACA
TGAAGCCGAGAGGGGCGGATATCATGATATCTTACAACTTCTCACATCAG
CTGAGAAAGGGGTTCCCGAAACTTCATCAGCTGCTATGAGTTTGTCGTGA back to topprotein sequence of Ggra10559.t1 >Ggra10559.t1 ID=Ggra10559.t1|Name=Ggra10559.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=850bp
MGNNFTKHANPPPSRSHDEDGARLLGLRNNLKQTEIETLIDYYKSMDPNN
EGLLLEQFKKATGNFFATELTVDPKLVFNIFDTADGGVRGRVTLREFILG
YAILCRGTTESRLKYLFSIYDNSQDGKGYLSRDQLCSALTLMQRIASELT
DTVEQLDAQQNEMRIQHVADQIIADSSDPKNEAISYADFIEQLKSDDNVT
EWLDDLQSAAGEHLKYIEKRELDLAQLNMERNGLVQAEASPRAHARMDWN
PDSSTPSSSSSGKRPRIPKPKKQKLVRRDLKHPRFELLRAASRKEDADDE
AHEDLNAAMPFIINYDDIKFGKILGRGACATVYECQWMHVPVAVKVFKDG
HGDAAGVDKLSTSVEESRKDVVGDYVEEFWLLLQIRHPNCLLYMGICFEP
VVCIVTELYTGGSVANYLHGPNPRRLTPQKAVEMLCGVARGMYYLHASSP
PILHRDLKTSNILINQALTHCVICDFGLSRQFVSNASGVHLSSSGRPAKG
GIVGTPYTMAPEIMELKPYTPAADVYSFGIVMYEMYTGRFPFAKKTPIQV
MFHVVEGNRPAFYEEDRVPKILEDLIKKCWAQNPADRPSFEEILAILTSN
TLGAELSDRQTVSTRQQNRLGSPDEEADEDDLSKRLLEAVYRGQTELVGQ
LIDRGAKVNYSDYDKRTALHVAAAEGRTACIRLLISAGARLSFDRWNNSP
LVDAMNYANRAGDSEPIRLLRSIEGRISGHVERSGVLDSHHKETLLNQAA
MVAAADGDVDSMSRLVMTGLDVNCCDYDRRTPLMVAASEGRHDIVQFLLD
NGADMDHRDRWGSTAIHEAERGGYHDILQLLTSAEKGVPETSSAAMSLS* back to topmRNA from alignment at tig00000904_pilon:184142..186917+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10559.t1 ID=Ggra10559.t1|Name=Ggra10559.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2776bp|location=Sequence derived from alignment at tig00000904_pilon:184142..186917+ (Gracilaria gracilis GNS1m male)
ATGGGCAATAACTTCACCAAGCATGCCAATCCTCCGCCTTCACGCTCTCA
CGATGAAGATGGCGCCCGTCTGCTCGGCCTGCGGAACAACTTGAAGCAAA
CTGAGATTGAAACCCTCATCGACTACTATAAGAGCATGGACCCCAACAAT
GAAGGTTTGCTTCTGGAGCAGTTTAAGAAAGCCACCGGAAACTTCTTTGC
CACCGAGCTCACCGTAGACCCTAAACTCGTGTTCAACATTTTCGATACTG
CAGACGGCGGAGTGCGAGGGCGCGTTACGCTTCGTGAGTTCATCTTGGGT
TATGCTATACTGTGTCGCGGCACCACAGAAAGTCGTCTCAAGTATTTATT
TTCCATATATGATAATTCTCAAGATGGAAAGGGCTATCTCTCGAGAGACC
AATTATGCAGCGCGTTAACGCTTATGCAGAGAATCGCCTCTGAGCTCACG
GATACAGTCGAACAGCTCGACGCCCAGCAAAATGAAATGCGAATCCAACA
TGTCGCCGACCAGATCATAGCCGACTCCTCAGATCCGAAGAACGAGGCCA
TTTCATATGCTGACTTTATCGAACAATTGAAGAGCGATGATAATGTCACT
GAATGGCTTGATGATTTGCAATCAGCCGCTGGTGAGCACTTGAAGTACAT
TGAAAAACGTGAACTTGACCTTGCCCAACTTAATATGGAGAGAAATGGTC
TTGTTCAGGCCGAAGCTTCTCCCCGTGCTCACGCCCGTATGGATTGGAAC
CCGGATTCTTCTACCCCCTCGTCCTCCAGCTCTGGAAAGCGACCTCGCAT
CCCCAAGCCCAAAAAGCAGAAGCTGGTTCGACGCGATTTGAAACACCCTC
GCTTCGAATTGCTGCGTGCTGCCTCTCGGAAAGAAGACGCTGATGATGAA
GCACATGAAGATTTAAATGCCGCCATGCCCTTTATCATCAATTATGACGA
CATCAAGTTTGGCAAGATTCTCGGAAGGGGTGCTTGTGCCACTGTGTATG
AGTGTCAGTGGATGCACGTCCCTGTAGCCGTCAAGGTTTTCAAGGATGGA
CATGGCGATGCCGCCGGTGTGGACAAACTCTCCACTTCTGTTGAAGAGAG
TCGAAAAGATGTTGTTGGTGATTACGTTGAGGAGTTCTGGTTGCTTTTGC
AAATACGACATCCAAACTGCTTACTCTACATGGGTATATGTTTTGAACCG
GTGGTCTGTATTGTAACAGAGTTGTACACGGGTGGTTCGGTAGCCAATTA
TCTACATGGCCCGAACCCTCGCCGCCTCACTCCACAGAAGGCAGTTGAAA
TGCTTTGTGGAGTCGCTCGTGGCATGTATTACCTTCATGCCTCCTCCCCA
CCAATTTTGCACAGAGACTTGAAAACAAGTAACATTCTTATCAACCAAGC
ACTAACTCACTGTGTGATTTGTGACTTTGGCCTTAGTCGGCAGTTCGTCA
GCAATGCTTCTGGTGTGCATCTTAGTTCTTCAGGGAGACCGGCAAAGGGG
GGTATAGTTGGAACACCATACACAATGGCACCGGAGATAATGGAGCTCAA
ACCGTACACTCCAGCTGCCGATGTGTATTCGTTTGGAATTGTGATGTACG
AGATGTACACCGGTAGGTTTCCGTTTGCTAAGAAGACGCCTATACAAGTC
ATGTTTCATGTTGTCGAAGGGAACAGGCCAGCCTTCTACGAGGAAGATCG
AGTGCCCAAGATCCTTGAGGACCTCATCAAGAAATGCTGGGCGCAAAACC
CTGCCGATAGACCAAGTTTTGAGGAGATTCTGGCTATACTTACGAGCAAT
ACACTTGGGGCGGAACTGTCGGATAGACAGACAGTGTCCACCAGACAACA
AAACCGATTGGGATCTCCAGATGAGGAAGCAGATGAAGATGATCTTTCTA
AGCGACTGCTTGAAGCTGTGTACAGAGGGCAAACGGAGTTAGTTGGACAG
TTGATTGACAGGGGTGCGAAGGTGAACTACTCTGACTATGACAAACGAAC
CGCTCTTCATGTTGGTAAGTCTTACAATCCCTTTATTCGTATAGATTGGA
TAATAGCAATGAATCTAACTAACTTGCAATGGTGTTGTGCACATGTTCCC
TGCGCGGCGTTTCTTTCGTAGCTGCCGCTGAAGGGCGTACGGCATGCATA
AGACTTTTGATTTCTGCAGGCGCGAGACTGTCCTTCGACAGATGGAACAA
CTCGCCTCTCGTTGACGCTATGAACTACGCCAATCGAGCTGGCGATAGTG
AACCTATCCGACTGCTGAGGTCTATCGAAGGCAGGATCTCTGGCCATGTC
GAAAGATCTGGCGTTCTCGACTCTCATCACAAGGAGACTTTGTTGAATCA
AGCTGCGATGGTCGCAGCGGCTGATGGTGATGTGGATAGCATGTCAAGGC
TTGTCATGACAGGGTTAGATGTGAACTGTTGTGATTATGATCGCCGCACA
CCGCTGATGGTAAGTTATTTTTCAAGGTTCTCACTTTCTGCAGGTTCAAA
CACAACTGCGCTCTGCGGTGTTTGTGCATAAGTTTACTCTAACAAGAATT
TGAACCATTCCTCTATTCCTTGACACAGGTGGCTGCTTCTGAGGGACGTC
ACGACATTGTGCAGTTTTTGCTTGATAACGGTGCTGATATGGATCATCGT
GACAGATGGGGTTCAACCGCGATACATGAAGCCGAGAGGGGCGGATATCA
TGATATCTTACAACTTCTCACATCAGCTGAGAAAGGGGTTCCCGAAACTT
CATCAGCTGCTATGAGTTTGTCGTGA back to topCoding sequence (CDS) from alignment at tig00000904_pilon:184142..186917+ >Ggra10559.t1 ID=Ggra10559.t1|Name=Ggra10559.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2550bp|location=Sequence derived from alignment at tig00000904_pilon:184142..186917+ (Gracilaria gracilis GNS1m male)
ATGGGCAATAACTTCACCAAGCATGCCAATCCTCCGCCTTCACGCTCTCA
CGATGAAGATGGCGCCCGTCTGCTCGGCCTGCGGAACAACTTGAAGCAAA
CTGAGATTGAAACCCTCATCGACTACTATAAGAGCATGGACCCCAACAAT
GAAGGTTTGCTTCTGGAGCAGTTTAAGAAAGCCACCGGAAACTTCTTTGC
CACCGAGCTCACCGTAGACCCTAAACTCGTGTTCAACATTTTCGATACTG
CAGACGGCGGAGTGCGAGGGCGCGTTACGCTTCGTGAGTTCATCTTGGGT
TATGCTATACTGTGTCGCGGCACCACAGAAAGTCGTCTCAAGTATTTATT
TTCCATATATGATAATTCTCAAGATGGAAAGGGCTATCTCTCGAGAGACC
AATTATGCAGCGCGTTAACGCTTATGCAGAGAATCGCCTCTGAGCTCACG
GATACAGTCGAACAGCTCGACGCCCAGCAAAATGAAATGCGAATCCAACA
TGTCGCCGACCAGATCATAGCCGACTCCTCAGATCCGAAGAACGAGGCCA
TTTCATATGCTGACTTTATCGAACAATTGAAGAGCGATGATAATGTCACT
GAATGGCTTGATGATTTGCAATCAGCCGCTGGTGAGCACTTGAAGTACAT
TGAAAAACGTGAACTTGACCTTGCCCAACTTAATATGGAGAGAAATGGTC
TTGTTCAGGCCGAAGCTTCTCCCCGTGCTCACGCCCGTATGGATTGGAAC
CCGGATTCTTCTACCCCCTCGTCCTCCAGCTCTGGAAAGCGACCTCGCAT
CCCCAAGCCCAAAAAGCAGAAGCTGGTTCGACGCGATTTGAAACACCCTC
GCTTCGAATTGCTGCGTGCTGCCTCTCGGAAAGAAGACGCTGATGATGAA
GCACATGAAGATTTAAATGCCGCCATGCCCTTTATCATCAATTATGACGA
CATCAAGTTTGGCAAGATTCTCGGAAGGGGTGCTTGTGCCACTGTGTATG
AGTGTCAGTGGATGCACGTCCCTGTAGCCGTCAAGGTTTTCAAGGATGGA
CATGGCGATGCCGCCGGTGTGGACAAACTCTCCACTTCTGTTGAAGAGAG
TCGAAAAGATGTTGTTGGTGATTACGTTGAGGAGTTCTGGTTGCTTTTGC
AAATACGACATCCAAACTGCTTACTCTACATGGGTATATGTTTTGAACCG
GTGGTCTGTATTGTAACAGAGTTGTACACGGGTGGTTCGGTAGCCAATTA
TCTACATGGCCCGAACCCTCGCCGCCTCACTCCACAGAAGGCAGTTGAAA
TGCTTTGTGGAGTCGCTCGTGGCATGTATTACCTTCATGCCTCCTCCCCA
CCAATTTTGCACAGAGACTTGAAAACAAGTAACATTCTTATCAACCAAGC
ACTAACTCACTGTGTGATTTGTGACTTTGGCCTTAGTCGGCAGTTCGTCA
GCAATGCTTCTGGTGTGCATCTTAGTTCTTCAGGGAGACCGGCAAAGGGG
GGTATAGTTGGAACACCATACACAATGGCACCGGAGATAATGGAGCTCAA
ACCGTACACTCCAGCTGCCGATGTGTATTCGTTTGGAATTGTGATGTACG
AGATGTACACCGGTAGGTTTCCGTTTGCTAAGAAGACGCCTATACAAGTC
ATGTTTCATGTTGTCGAAGGGAACAGGCCAGCCTTCTACGAGGAAGATCG
AGTGCCCAAGATCCTTGAGGACCTCATCAAGAAATGCTGGGCGCAAAACC
CTGCCGATAGACCAAGTTTTGAGGAGATTCTGGCTATACTTACGAGCAAT
ACACTTGGGGCGGAACTGTCGGATAGACAGACAGTGTCCACCAGACAACA
AAACCGATTGGGATCTCCAGATGAGGAAGCAGATGAAGATGATCTTTCTA
AGCGACTGCTTGAAGCTGTGTACAGAGGGCAAACGGAGTTAGTTGGACAG
TTGATTGACAGGGGTGCGAAGGTGAACTACTCTGACTATGACAAACGAAC
CGCTCTTCATGTTGCTGCCGCTGAAGGGCGTACGGCATGCATAAGACTTT
TGATTTCTGCAGGCGCGAGACTGTCCTTCGACAGATGGAACAACTCGCCT
CTCGTTGACGCTATGAACTACGCCAATCGAGCTGGCGATAGTGAACCTAT
CCGACTGCTGAGGTCTATCGAAGGCAGGATCTCTGGCCATGTCGAAAGAT
CTGGCGTTCTCGACTCTCATCACAAGGAGACTTTGTTGAATCAAGCTGCG
ATGGTCGCAGCGGCTGATGGTGATGTGGATAGCATGTCAAGGCTTGTCAT
GACAGGGTTAGATGTGAACTGTTGTGATTATGATCGCCGCACACCGCTGA
TGGTGGCTGCTTCTGAGGGACGTCACGACATTGTGCAGTTTTTGCTTGAT
AACGGTGCTGATATGGATCATCGTGACAGATGGGGTTCAACCGCGATACA
TGAAGCCGAGAGGGGCGGATATCATGATATCTTACAACTTCTCACATCAG
CTGAGAAAGGGGTTCCCGAAACTTCATCAGCTGCTATGAGTTTGTCGTGA back to top
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