Ggra10357.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10357.t1
Unique NameGgra10357.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length156
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:1697700..1698167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10357Ggra10357Gracilaria gracilis GNS1m malegenetig00000016_pilon 1697700..1698167 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10357.t1.stop1Ggra10357.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 1697700..1697702 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10357.t1.CDS1Ggra10357.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 1697700..1698167 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10357.t1.exon1Ggra10357.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 1697700..1698167 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10357.t1.start1Ggra10357.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 1698165..1698167 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10357.t1Ggra10357.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 1697700..1698167 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10357.t1 ID=Ggra10357.t1|Name=Ggra10357.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=156bp
MKLCIVFLSAFLLVVSAAPVNPQLDLTNQATRQPGLGGLFPALGITLPPG
LFPATTAPPTTTAAPPVVTTTTVPLITTTTAPITTTTTTAPPTTAAPGSS
TGGAGTGIGGLFTLGDNVTFIGGLSPGSGFFGGGMDSTSTATGALLGIGI
GGVGR*
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spliced messenger RNA

>Ggra10357.t1 ID=Ggra10357.t1|Name=Ggra10357.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=468bp|location=Sequence derived from alignment at tig00000016_pilon:1697700..1698167- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTCTGCATCGTCTTCCTCTCCGCATTCCTCCTCGTTGTATCGGC
TGCCCCGGTGAACCCGCAACTGGATCTCACTAACCAAGCTACCCGTCAGC
CGGGTCTCGGTGGCCTCTTCCCGGCACTCGGCATAACTCTTCCCCCTGGA
CTCTTCCCGGCCACGACTGCACCCCCGACCACGACTGCAGCTCCGCCCGT
GGTCACCACGACTACAGTCCCGCTCATCACTACGACTACAGCTCCGATCA
CCACGACTACGACTACAGCTCCGCCCACGACTGCAGCCCCTGGTTCGAGT
ACTGGTGGCGCAGGTACCGGGATTGGAGGTCTCTTCACTCTTGGTGATAA
TGTTACCTTCATTGGCGGTCTTTCCCCCGGCAGTGGCTTCTTCGGCGGTG
GAATGGATAGCACTTCTACCGCAACTGGTGCCTTGCTCGGTATCGGTATA
GGTGGTGTCGGTCGTTAA
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protein sequence of Ggra10357.t1

>Ggra10357.t1 ID=Ggra10357.t1|Name=Ggra10357.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=156bp
MKLCIVFLSAFLLVVSAAPVNPQLDLTNQATRQPGLGGLFPALGITLPPG
LFPATTAPPTTTAAPPVVTTTTVPLITTTTAPITTTTTTAPPTTAAPGSS
TGGAGTGIGGLFTLGDNVTFIGGLSPGSGFFGGGMDSTSTATGALLGIGI
GGVGR*
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mRNA from alignment at tig00000016_pilon:1697700..1698167-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10357.t1 ID=Ggra10357.t1|Name=Ggra10357.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=468bp|location=Sequence derived from alignment at tig00000016_pilon:1697700..1698167- (Gracilaria gracilis GNS1m male)
ATGAAGCTCTGCATCGTCTTCCTCTCCGCATTCCTCCTCGTTGTATCGGC
TGCCCCGGTGAACCCGCAACTGGATCTCACTAACCAAGCTACCCGTCAGC
CGGGTCTCGGTGGCCTCTTCCCGGCACTCGGCATAACTCTTCCCCCTGGA
CTCTTCCCGGCCACGACTGCACCCCCGACCACGACTGCAGCTCCGCCCGT
GGTCACCACGACTACAGTCCCGCTCATCACTACGACTACAGCTCCGATCA
CCACGACTACGACTACAGCTCCGCCCACGACTGCAGCCCCTGGTTCGAGT
ACTGGTGGCGCAGGTACCGGGATTGGAGGTCTCTTCACTCTTGGTGATAA
TGTTACCTTCATTGGCGGTCTTTCCCCCGGCAGTGGCTTCTTCGGCGGTG
GAATGGATAGCACTTCTACCGCAACTGGTGCCTTGCTCGGTATCGGTATA
GGTGGTGTCGGTCGTTAA
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Coding sequence (CDS) from alignment at tig00000016_pilon:1697700..1698167-

>Ggra10357.t1 ID=Ggra10357.t1|Name=Ggra10357.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=468bp|location=Sequence derived from alignment at tig00000016_pilon:1697700..1698167- (Gracilaria gracilis GNS1m male)
ATGAAGCTCTGCATCGTCTTCCTCTCCGCATTCCTCCTCGTTGTATCGGC
TGCCCCGGTGAACCCGCAACTGGATCTCACTAACCAAGCTACCCGTCAGC
CGGGTCTCGGTGGCCTCTTCCCGGCACTCGGCATAACTCTTCCCCCTGGA
CTCTTCCCGGCCACGACTGCACCCCCGACCACGACTGCAGCTCCGCCCGT
GGTCACCACGACTACAGTCCCGCTCATCACTACGACTACAGCTCCGATCA
CCACGACTACGACTACAGCTCCGCCCACGACTGCAGCCCCTGGTTCGAGT
ACTGGTGGCGCAGGTACCGGGATTGGAGGTCTCTTCACTCTTGGTGATAA
TGTTACCTTCATTGGCGGTCTTTCCCCCGGCAGTGGCTTCTTCGGCGGTG
GAATGGATAGCACTTCTACCGCAACTGGTGCCTTGCTCGGTATCGGTATA
GGTGGTGTCGGTCGTTAA
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