Ggra10339.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10339.t1
Unique NameGgra10339.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length601
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:1376481..1378283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10339Ggra10339Gracilaria gracilis GNS1m malegenetig00000016_pilon 1376481..1378283 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10339.t1.stop1Ggra10339.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 1376481..1376483 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10339.t1.CDS1Ggra10339.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 1376481..1378283 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10339.t1.exon1Ggra10339.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 1376481..1378283 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10339.t1.start1Ggra10339.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 1378281..1378283 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10339.t1Ggra10339.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 1376481..1378283 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10339.t1 ID=Ggra10339.t1|Name=Ggra10339.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=601bp
MQSETSDTQTAQHNRDGEGNVDSLSQWTVSTYRLRAGHRTQALVQVDHPN
NMGTNEHNGLSAEKARLSRFRGHYISKKLHDAATGQTKGIVAILFRRFAG
ADFLAQCTQKTCFRKEERTIPPPPPAGRLVYTDNGVTHAVERSASALAEA
RALYGAEVIADVQLGFSKPISLPELRAPNTELPLVDDCIPMEHDRVPEHE
EVLSVVISYRHTTEKRGHILNVSATTWTDIVRTAATLCEAAGRSAVRFWT
DQILSRRKPSAALRWVSSGVLPYSIYPVLYVHSDASQLRRNLRRMWISVE
HLMATFGQGIVHVGKALGEDELPMEWPSTFLRVSDDVNWMLGLGHRLHSC
VRKLCSALMCGLVRNKEMSWPGDAQDLLDWASAITSALLFRDIAHSFDCN
DCRLPTGYTSEQRLMALYSTGVVIDPQEPESLFNETHPRLDVPAVSLEYD
GRAWDGFREWIPESCLWGRKADEDKKESTMLMSGTRALVMSHGGSRAVAV
LQFCSRTTQETTLITAHLLVGLTDVRRGARQANVEWSKRFWPVYPLQMWN
SFEAVWRDTSDRNAFVELGENVGASSGLDYTDLTGATDVKRLTASRIRWR
*
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spliced messenger RNA

>Ggra10339.t1 ID=Ggra10339.t1|Name=Ggra10339.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1803bp|location=Sequence derived from alignment at tig00000016_pilon:1376481..1378283- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAATCCGAAACCTCAGATACGCAGACTGCTCAACACAACAGAGATGG
CGAGGGGAATGTTGACTCGCTATCCCAGTGGACTGTTTCAACCTACAGGC
TACGGGCCGGTCACAGAACACAGGCTCTCGTCCAGGTCGACCACCCAAAC
AACATGGGTACGAATGAGCATAACGGCCTGTCGGCCGAGAAGGCGCGCTT
ATCACGCTTCCGAGGGCACTACATCTCCAAGAAGCTGCACGATGCTGCCA
CCGGACAAACAAAAGGAATCGTTGCCATTCTCTTCAGGCGCTTCGCCGGC
GCTGACTTCTTGGCTCAATGTACGCAGAAGACTTGCTTCCGCAAGGAAGA
ACGAACCATCCCACCACCGCCACCTGCCGGTAGGCTGGTGTACACCGATA
ACGGTGTGACTCACGCCGTAGAAAGAAGCGCTTCCGCTCTCGCCGAGGCA
AGGGCTCTGTATGGGGCAGAGGTTATCGCAGATGTGCAGCTAGGCTTTTC
CAAACCTATCTCGCTTCCAGAACTGCGCGCCCCAAACACCGAACTTCCTC
TAGTCGATGACTGCATCCCCATGGAGCACGATCGAGTCCCTGAACATGAA
GAAGTGCTGTCGGTAGTTATTTCGTATCGACATACCACGGAGAAACGCGG
TCACATCCTCAACGTCAGCGCCACTACTTGGACCGACATTGTCAGAACTG
CCGCGACTCTGTGTGAAGCTGCGGGTCGTTCTGCCGTCCGCTTCTGGACC
GATCAGATTTTGTCGCGCCGAAAACCGTCAGCGGCGCTGCGATGGGTGTC
ATCGGGCGTGCTGCCGTATTCTATCTATCCTGTGCTGTACGTCCACTCAG
ACGCCTCGCAGTTGCGACGAAATTTGCGCCGCATGTGGATTTCCGTAGAG
CATCTCATGGCCACCTTTGGCCAGGGCATTGTGCATGTCGGGAAGGCCCT
CGGGGAAGATGAGTTGCCCATGGAATGGCCCTCGACATTCCTTCGTGTCA
GCGATGATGTGAATTGGATGCTTGGACTTGGACATCGTCTCCATTCATGT
GTGCGCAAGCTTTGCTCTGCCCTCATGTGCGGACTTGTGCGGAACAAGGA
GATGAGTTGGCCAGGAGACGCACAAGATCTTCTCGACTGGGCGTCCGCCA
TCACGTCCGCTCTGCTGTTTAGGGATATTGCCCATTCATTTGATTGTAAT
GACTGCCGCCTGCCTACAGGATATACATCAGAGCAACGACTTATGGCATT
GTATAGCACTGGCGTTGTGATTGATCCGCAAGAGCCTGAATCTCTTTTCA
ACGAGACGCATCCACGTTTGGATGTACCGGCCGTATCGTTAGAGTACGAT
GGAAGGGCGTGGGATGGCTTTCGGGAATGGATTCCAGAGAGCTGTCTTTG
GGGTAGGAAGGCAGATGAAGATAAGAAAGAATCTACAATGTTGATGAGTG
GAACTCGAGCTTTGGTGATGTCGCATGGTGGAAGTCGAGCTGTTGCTGTT
TTGCAGTTTTGTTCCAGAACAACGCAGGAAACCACCTTAATCACGGCACA
CCTGCTGGTAGGGCTGACGGACGTCAGGCGGGGCGCGAGGCAGGCCAATG
TGGAGTGGTCAAAGCGATTTTGGCCTGTATACCCGCTGCAAATGTGGAAT
TCTTTCGAAGCCGTGTGGAGAGATACGAGCGATCGCAACGCCTTTGTTGA
ACTCGGTGAGAATGTCGGGGCTTCTTCGGGACTTGATTACACTGATTTGA
CAGGAGCGACCGATGTGAAACGCCTAACTGCAAGCCGGATCCGATGGAGA
TAA
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protein sequence of Ggra10339.t1

>Ggra10339.t1 ID=Ggra10339.t1|Name=Ggra10339.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=601bp
MQSETSDTQTAQHNRDGEGNVDSLSQWTVSTYRLRAGHRTQALVQVDHPN
NMGTNEHNGLSAEKARLSRFRGHYISKKLHDAATGQTKGIVAILFRRFAG
ADFLAQCTQKTCFRKEERTIPPPPPAGRLVYTDNGVTHAVERSASALAEA
RALYGAEVIADVQLGFSKPISLPELRAPNTELPLVDDCIPMEHDRVPEHE
EVLSVVISYRHTTEKRGHILNVSATTWTDIVRTAATLCEAAGRSAVRFWT
DQILSRRKPSAALRWVSSGVLPYSIYPVLYVHSDASQLRRNLRRMWISVE
HLMATFGQGIVHVGKALGEDELPMEWPSTFLRVSDDVNWMLGLGHRLHSC
VRKLCSALMCGLVRNKEMSWPGDAQDLLDWASAITSALLFRDIAHSFDCN
DCRLPTGYTSEQRLMALYSTGVVIDPQEPESLFNETHPRLDVPAVSLEYD
GRAWDGFREWIPESCLWGRKADEDKKESTMLMSGTRALVMSHGGSRAVAV
LQFCSRTTQETTLITAHLLVGLTDVRRGARQANVEWSKRFWPVYPLQMWN
SFEAVWRDTSDRNAFVELGENVGASSGLDYTDLTGATDVKRLTASRIRWR
*
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mRNA from alignment at tig00000016_pilon:1376481..1378283-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10339.t1 ID=Ggra10339.t1|Name=Ggra10339.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1803bp|location=Sequence derived from alignment at tig00000016_pilon:1376481..1378283- (Gracilaria gracilis GNS1m male)
ATGCAATCCGAAACCTCAGATACGCAGACTGCTCAACACAACAGAGATGG
CGAGGGGAATGTTGACTCGCTATCCCAGTGGACTGTTTCAACCTACAGGC
TACGGGCCGGTCACAGAACACAGGCTCTCGTCCAGGTCGACCACCCAAAC
AACATGGGTACGAATGAGCATAACGGCCTGTCGGCCGAGAAGGCGCGCTT
ATCACGCTTCCGAGGGCACTACATCTCCAAGAAGCTGCACGATGCTGCCA
CCGGACAAACAAAAGGAATCGTTGCCATTCTCTTCAGGCGCTTCGCCGGC
GCTGACTTCTTGGCTCAATGTACGCAGAAGACTTGCTTCCGCAAGGAAGA
ACGAACCATCCCACCACCGCCACCTGCCGGTAGGCTGGTGTACACCGATA
ACGGTGTGACTCACGCCGTAGAAAGAAGCGCTTCCGCTCTCGCCGAGGCA
AGGGCTCTGTATGGGGCAGAGGTTATCGCAGATGTGCAGCTAGGCTTTTC
CAAACCTATCTCGCTTCCAGAACTGCGCGCCCCAAACACCGAACTTCCTC
TAGTCGATGACTGCATCCCCATGGAGCACGATCGAGTCCCTGAACATGAA
GAAGTGCTGTCGGTAGTTATTTCGTATCGACATACCACGGAGAAACGCGG
TCACATCCTCAACGTCAGCGCCACTACTTGGACCGACATTGTCAGAACTG
CCGCGACTCTGTGTGAAGCTGCGGGTCGTTCTGCCGTCCGCTTCTGGACC
GATCAGATTTTGTCGCGCCGAAAACCGTCAGCGGCGCTGCGATGGGTGTC
ATCGGGCGTGCTGCCGTATTCTATCTATCCTGTGCTGTACGTCCACTCAG
ACGCCTCGCAGTTGCGACGAAATTTGCGCCGCATGTGGATTTCCGTAGAG
CATCTCATGGCCACCTTTGGCCAGGGCATTGTGCATGTCGGGAAGGCCCT
CGGGGAAGATGAGTTGCCCATGGAATGGCCCTCGACATTCCTTCGTGTCA
GCGATGATGTGAATTGGATGCTTGGACTTGGACATCGTCTCCATTCATGT
GTGCGCAAGCTTTGCTCTGCCCTCATGTGCGGACTTGTGCGGAACAAGGA
GATGAGTTGGCCAGGAGACGCACAAGATCTTCTCGACTGGGCGTCCGCCA
TCACGTCCGCTCTGCTGTTTAGGGATATTGCCCATTCATTTGATTGTAAT
GACTGCCGCCTGCCTACAGGATATACATCAGAGCAACGACTTATGGCATT
GTATAGCACTGGCGTTGTGATTGATCCGCAAGAGCCTGAATCTCTTTTCA
ACGAGACGCATCCACGTTTGGATGTACCGGCCGTATCGTTAGAGTACGAT
GGAAGGGCGTGGGATGGCTTTCGGGAATGGATTCCAGAGAGCTGTCTTTG
GGGTAGGAAGGCAGATGAAGATAAGAAAGAATCTACAATGTTGATGAGTG
GAACTCGAGCTTTGGTGATGTCGCATGGTGGAAGTCGAGCTGTTGCTGTT
TTGCAGTTTTGTTCCAGAACAACGCAGGAAACCACCTTAATCACGGCACA
CCTGCTGGTAGGGCTGACGGACGTCAGGCGGGGCGCGAGGCAGGCCAATG
TGGAGTGGTCAAAGCGATTTTGGCCTGTATACCCGCTGCAAATGTGGAAT
TCTTTCGAAGCCGTGTGGAGAGATACGAGCGATCGCAACGCCTTTGTTGA
ACTCGGTGAGAATGTCGGGGCTTCTTCGGGACTTGATTACACTGATTTGA
CAGGAGCGACCGATGTGAAACGCCTAACTGCAAGCCGGATCCGATGGAGA
TAA
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Coding sequence (CDS) from alignment at tig00000016_pilon:1376481..1378283-

>Ggra10339.t1 ID=Ggra10339.t1|Name=Ggra10339.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1803bp|location=Sequence derived from alignment at tig00000016_pilon:1376481..1378283- (Gracilaria gracilis GNS1m male)
ATGCAATCCGAAACCTCAGATACGCAGACTGCTCAACACAACAGAGATGG
CGAGGGGAATGTTGACTCGCTATCCCAGTGGACTGTTTCAACCTACAGGC
TACGGGCCGGTCACAGAACACAGGCTCTCGTCCAGGTCGACCACCCAAAC
AACATGGGTACGAATGAGCATAACGGCCTGTCGGCCGAGAAGGCGCGCTT
ATCACGCTTCCGAGGGCACTACATCTCCAAGAAGCTGCACGATGCTGCCA
CCGGACAAACAAAAGGAATCGTTGCCATTCTCTTCAGGCGCTTCGCCGGC
GCTGACTTCTTGGCTCAATGTACGCAGAAGACTTGCTTCCGCAAGGAAGA
ACGAACCATCCCACCACCGCCACCTGCCGGTAGGCTGGTGTACACCGATA
ACGGTGTGACTCACGCCGTAGAAAGAAGCGCTTCCGCTCTCGCCGAGGCA
AGGGCTCTGTATGGGGCAGAGGTTATCGCAGATGTGCAGCTAGGCTTTTC
CAAACCTATCTCGCTTCCAGAACTGCGCGCCCCAAACACCGAACTTCCTC
TAGTCGATGACTGCATCCCCATGGAGCACGATCGAGTCCCTGAACATGAA
GAAGTGCTGTCGGTAGTTATTTCGTATCGACATACCACGGAGAAACGCGG
TCACATCCTCAACGTCAGCGCCACTACTTGGACCGACATTGTCAGAACTG
CCGCGACTCTGTGTGAAGCTGCGGGTCGTTCTGCCGTCCGCTTCTGGACC
GATCAGATTTTGTCGCGCCGAAAACCGTCAGCGGCGCTGCGATGGGTGTC
ATCGGGCGTGCTGCCGTATTCTATCTATCCTGTGCTGTACGTCCACTCAG
ACGCCTCGCAGTTGCGACGAAATTTGCGCCGCATGTGGATTTCCGTAGAG
CATCTCATGGCCACCTTTGGCCAGGGCATTGTGCATGTCGGGAAGGCCCT
CGGGGAAGATGAGTTGCCCATGGAATGGCCCTCGACATTCCTTCGTGTCA
GCGATGATGTGAATTGGATGCTTGGACTTGGACATCGTCTCCATTCATGT
GTGCGCAAGCTTTGCTCTGCCCTCATGTGCGGACTTGTGCGGAACAAGGA
GATGAGTTGGCCAGGAGACGCACAAGATCTTCTCGACTGGGCGTCCGCCA
TCACGTCCGCTCTGCTGTTTAGGGATATTGCCCATTCATTTGATTGTAAT
GACTGCCGCCTGCCTACAGGATATACATCAGAGCAACGACTTATGGCATT
GTATAGCACTGGCGTTGTGATTGATCCGCAAGAGCCTGAATCTCTTTTCA
ACGAGACGCATCCACGTTTGGATGTACCGGCCGTATCGTTAGAGTACGAT
GGAAGGGCGTGGGATGGCTTTCGGGAATGGATTCCAGAGAGCTGTCTTTG
GGGTAGGAAGGCAGATGAAGATAAGAAAGAATCTACAATGTTGATGAGTG
GAACTCGAGCTTTGGTGATGTCGCATGGTGGAAGTCGAGCTGTTGCTGTT
TTGCAGTTTTGTTCCAGAACAACGCAGGAAACCACCTTAATCACGGCACA
CCTGCTGGTAGGGCTGACGGACGTCAGGCGGGGCGCGAGGCAGGCCAATG
TGGAGTGGTCAAAGCGATTTTGGCCTGTATACCCGCTGCAAATGTGGAAT
TCTTTCGAAGCCGTGTGGAGAGATACGAGCGATCGCAACGCCTTTGTTGA
ACTCGGTGAGAATGTCGGGGCTTCTTCGGGACTTGATTACACTGATTTGA
CAGGAGCGACCGATGTGAAACGCCTAACTGCAAGCCGGATCCGATGGAGA
TAA
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