Ggra10329.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10329.t1
Unique NameGgra10329.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:1273735..1274373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10329Ggra10329Gracilaria gracilis GNS1m malegenetig00000016_pilon 1273735..1274373 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10329.t1.stop1Ggra10329.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 1273735..1273737 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10329.t1.CDS1Ggra10329.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 1273735..1274373 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10329.t1.exon1Ggra10329.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 1273735..1274373 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10329.t1.start1Ggra10329.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 1274371..1274373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10329.t1Ggra10329.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 1273735..1274373 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10329.t1 ID=Ggra10329.t1|Name=Ggra10329.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=213bp
MYVTHMIHVLVFLSILLSIGLAAENVIIIFCNGAQGCGTDSGLLVNCGTI
NATDGIVLLKAYERNDKFFITEKFVVPRRSLRLTIDPDDSPIDVPVSPSP
SLQDSSSTASISPSSSASPSTSPAVSVQPSKAKASYRWLTDGSGRTLSCS
KILPEVFGIGRFFPKTNTIILDCRSASIIQAITKCRKSSSKLCHASQGEA
KELDLIKSLFFT*
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spliced messenger RNA

>Ggra10329.t1 ID=Ggra10329.t1|Name=Ggra10329.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=639bp|location=Sequence derived from alignment at tig00000016_pilon:1273735..1274373- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACGTTACCCATATGATTCATGTTCTGGTGTTTCTGAGCATCTTGTT
ATCCATTGGGTTAGCCGCCGAAAATGTGATCATCATCTTCTGCAATGGGG
CACAGGGGTGTGGTACCGACAGCGGCCTACTCGTCAATTGTGGTACAATC
AATGCAACAGATGGCATAGTACTTCTGAAGGCATACGAACGTAATGACAA
ATTCTTCATCACGGAGAAGTTTGTGGTCCCCAGAAGATCCTTGAGGCTCA
CAATAGATCCGGACGACTCCCCAATTGACGTTCCGGTATCGCCCTCACCA
TCATTGCAGGACTCTTCATCCACCGCATCTATCTCGCCCTCGAGCTCTGC
ATCTCCATCGACGTCGCCGGCAGTTTCCGTTCAACCATCCAAAGCCAAAG
CTTCGTACAGATGGCTGACTGATGGTTCGGGTCGGACGCTTTCATGCTCG
AAGATTTTACCTGAGGTGTTCGGAATTGGGCGTTTCTTCCCGAAAACGAA
CACCATTATACTTGATTGTCGATCTGCTTCGATAATACAGGCTATCACAA
AATGTCGCAAGAGTTCTTCTAAACTGTGTCATGCATCGCAAGGGGAAGCT
AAAGAGCTAGATTTAATCAAATCCCTTTTCTTTACGTAA
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protein sequence of Ggra10329.t1

>Ggra10329.t1 ID=Ggra10329.t1|Name=Ggra10329.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MYVTHMIHVLVFLSILLSIGLAAENVIIIFCNGAQGCGTDSGLLVNCGTI
NATDGIVLLKAYERNDKFFITEKFVVPRRSLRLTIDPDDSPIDVPVSPSP
SLQDSSSTASISPSSSASPSTSPAVSVQPSKAKASYRWLTDGSGRTLSCS
KILPEVFGIGRFFPKTNTIILDCRSASIIQAITKCRKSSSKLCHASQGEA
KELDLIKSLFFT*
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mRNA from alignment at tig00000016_pilon:1273735..1274373-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10329.t1 ID=Ggra10329.t1|Name=Ggra10329.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=639bp|location=Sequence derived from alignment at tig00000016_pilon:1273735..1274373- (Gracilaria gracilis GNS1m male)
ATGTACGTTACCCATATGATTCATGTTCTGGTGTTTCTGAGCATCTTGTT
ATCCATTGGGTTAGCCGCCGAAAATGTGATCATCATCTTCTGCAATGGGG
CACAGGGGTGTGGTACCGACAGCGGCCTACTCGTCAATTGTGGTACAATC
AATGCAACAGATGGCATAGTACTTCTGAAGGCATACGAACGTAATGACAA
ATTCTTCATCACGGAGAAGTTTGTGGTCCCCAGAAGATCCTTGAGGCTCA
CAATAGATCCGGACGACTCCCCAATTGACGTTCCGGTATCGCCCTCACCA
TCATTGCAGGACTCTTCATCCACCGCATCTATCTCGCCCTCGAGCTCTGC
ATCTCCATCGACGTCGCCGGCAGTTTCCGTTCAACCATCCAAAGCCAAAG
CTTCGTACAGATGGCTGACTGATGGTTCGGGTCGGACGCTTTCATGCTCG
AAGATTTTACCTGAGGTGTTCGGAATTGGGCGTTTCTTCCCGAAAACGAA
CACCATTATACTTGATTGTCGATCTGCTTCGATAATACAGGCTATCACAA
AATGTCGCAAGAGTTCTTCTAAACTGTGTCATGCATCGCAAGGGGAAGCT
AAAGAGCTAGATTTAATCAAATCCCTTTTCTTTACGTAA
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Coding sequence (CDS) from alignment at tig00000016_pilon:1273735..1274373-

>Ggra10329.t1 ID=Ggra10329.t1|Name=Ggra10329.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=639bp|location=Sequence derived from alignment at tig00000016_pilon:1273735..1274373- (Gracilaria gracilis GNS1m male)
ATGTACGTTACCCATATGATTCATGTTCTGGTGTTTCTGAGCATCTTGTT
ATCCATTGGGTTAGCCGCCGAAAATGTGATCATCATCTTCTGCAATGGGG
CACAGGGGTGTGGTACCGACAGCGGCCTACTCGTCAATTGTGGTACAATC
AATGCAACAGATGGCATAGTACTTCTGAAGGCATACGAACGTAATGACAA
ATTCTTCATCACGGAGAAGTTTGTGGTCCCCAGAAGATCCTTGAGGCTCA
CAATAGATCCGGACGACTCCCCAATTGACGTTCCGGTATCGCCCTCACCA
TCATTGCAGGACTCTTCATCCACCGCATCTATCTCGCCCTCGAGCTCTGC
ATCTCCATCGACGTCGCCGGCAGTTTCCGTTCAACCATCCAAAGCCAAAG
CTTCGTACAGATGGCTGACTGATGGTTCGGGTCGGACGCTTTCATGCTCG
AAGATTTTACCTGAGGTGTTCGGAATTGGGCGTTTCTTCCCGAAAACGAA
CACCATTATACTTGATTGTCGATCTGCTTCGATAATACAGGCTATCACAA
AATGTCGCAAGAGTTCTTCTAAACTGTGTCATGCATCGCAAGGGGAAGCT
AAAGAGCTAGATTTAATCAAATCCCTTTTCTTTACGTAA
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