Ggra10327.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10327.t1
Unique NameGgra10327.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length230
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:1216348..1217037 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10327Ggra10327Gracilaria gracilis GNS1m malegenetig00000016_pilon 1216348..1217037 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10327.t1.start1Ggra10327.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 1216348..1216350 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10327.t1.CDS1Ggra10327.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 1216348..1217037 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10327.t1.exon1Ggra10327.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 1216348..1217037 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10327.t1.stop1Ggra10327.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 1217035..1217037 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10327.t1Ggra10327.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 1216348..1217037 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10327.t1 ID=Ggra10327.t1|Name=Ggra10327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=230bp
MKIIAAFVLILHAALPAIAQVVDPCPNVCNPNPNGYVQSQIECNQQDRRN
LCEVENCLINSAPGYSCHLPENSFIVSNEVFDSNSADLRVTYTWGENQTE
LDSATVFLENVSGNACGDTGPYMTFSGDVRTRGGTEFTTVDIELARRESR
WSEFTSIAARAQWFQQPNQGPATLTMFLMDRATGTPLQGSERSMTINPGA
GTGCAATPVGFVFISRGLQNTRFMLSTGQ*
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spliced messenger RNA

>Ggra10327.t1 ID=Ggra10327.t1|Name=Ggra10327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=690bp|location=Sequence derived from alignment at tig00000016_pilon:1216348..1217037+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAATCATTGCCGCATTCGTTCTGATTCTGCACGCTGCCCTCCCCGC
CATCGCACAGGTGGTAGACCCTTGTCCGAATGTTTGCAACCCGAACCCAA
ACGGATACGTCCAGTCTCAAATCGAGTGTAACCAACAGGATCGTCGGAAC
TTGTGCGAGGTCGAGAACTGCTTGATCAATAGCGCTCCCGGCTATTCATG
CCATCTACCCGAGAATTCTTTCATAGTGAGCAATGAGGTCTTCGATTCGA
ATTCGGCTGACCTGAGAGTCACCTACACTTGGGGAGAGAACCAGACAGAG
CTGGATAGCGCAACTGTGTTTTTGGAAAATGTGTCCGGAAACGCTTGCGG
TGACACAGGGCCCTATATGACTTTCAGCGGCGACGTTAGGACTCGGGGAG
GAACGGAATTCACCACTGTGGATATCGAACTGGCTCGTCGGGAATCTCGC
TGGAGTGAATTTACTTCTATCGCTGCTCGTGCTCAATGGTTCCAGCAACC
GAACCAGGGACCGGCCACTCTGACGATGTTCTTGATGGACAGGGCCACCG
GAACTCCACTTCAAGGTTCTGAGCGGTCCATGACCATCAACCCTGGGGCG
GGCACTGGCTGCGCAGCTACGCCGGTAGGATTTGTGTTCATCAGTCGTGG
CTTGCAGAATACGCGCTTCATGCTCTCCACTGGCCAGTAA
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protein sequence of Ggra10327.t1

>Ggra10327.t1 ID=Ggra10327.t1|Name=Ggra10327.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bp
MKIIAAFVLILHAALPAIAQVVDPCPNVCNPNPNGYVQSQIECNQQDRRN
LCEVENCLINSAPGYSCHLPENSFIVSNEVFDSNSADLRVTYTWGENQTE
LDSATVFLENVSGNACGDTGPYMTFSGDVRTRGGTEFTTVDIELARRESR
WSEFTSIAARAQWFQQPNQGPATLTMFLMDRATGTPLQGSERSMTINPGA
GTGCAATPVGFVFISRGLQNTRFMLSTGQ*
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mRNA from alignment at tig00000016_pilon:1216348..1217037+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10327.t1 ID=Ggra10327.t1|Name=Ggra10327.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=690bp|location=Sequence derived from alignment at tig00000016_pilon:1216348..1217037+ (Gracilaria gracilis GNS1m male)
ATGAAAATCATTGCCGCATTCGTTCTGATTCTGCACGCTGCCCTCCCCGC
CATCGCACAGGTGGTAGACCCTTGTCCGAATGTTTGCAACCCGAACCCAA
ACGGATACGTCCAGTCTCAAATCGAGTGTAACCAACAGGATCGTCGGAAC
TTGTGCGAGGTCGAGAACTGCTTGATCAATAGCGCTCCCGGCTATTCATG
CCATCTACCCGAGAATTCTTTCATAGTGAGCAATGAGGTCTTCGATTCGA
ATTCGGCTGACCTGAGAGTCACCTACACTTGGGGAGAGAACCAGACAGAG
CTGGATAGCGCAACTGTGTTTTTGGAAAATGTGTCCGGAAACGCTTGCGG
TGACACAGGGCCCTATATGACTTTCAGCGGCGACGTTAGGACTCGGGGAG
GAACGGAATTCACCACTGTGGATATCGAACTGGCTCGTCGGGAATCTCGC
TGGAGTGAATTTACTTCTATCGCTGCTCGTGCTCAATGGTTCCAGCAACC
GAACCAGGGACCGGCCACTCTGACGATGTTCTTGATGGACAGGGCCACCG
GAACTCCACTTCAAGGTTCTGAGCGGTCCATGACCATCAACCCTGGGGCG
GGCACTGGCTGCGCAGCTACGCCGGTAGGATTTGTGTTCATCAGTCGTGG
CTTGCAGAATACGCGCTTCATGCTCTCCACTGGCCAGTAA
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Coding sequence (CDS) from alignment at tig00000016_pilon:1216348..1217037+

>Ggra10327.t1 ID=Ggra10327.t1|Name=Ggra10327.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=690bp|location=Sequence derived from alignment at tig00000016_pilon:1216348..1217037+ (Gracilaria gracilis GNS1m male)
ATGAAAATCATTGCCGCATTCGTTCTGATTCTGCACGCTGCCCTCCCCGC
CATCGCACAGGTGGTAGACCCTTGTCCGAATGTTTGCAACCCGAACCCAA
ACGGATACGTCCAGTCTCAAATCGAGTGTAACCAACAGGATCGTCGGAAC
TTGTGCGAGGTCGAGAACTGCTTGATCAATAGCGCTCCCGGCTATTCATG
CCATCTACCCGAGAATTCTTTCATAGTGAGCAATGAGGTCTTCGATTCGA
ATTCGGCTGACCTGAGAGTCACCTACACTTGGGGAGAGAACCAGACAGAG
CTGGATAGCGCAACTGTGTTTTTGGAAAATGTGTCCGGAAACGCTTGCGG
TGACACAGGGCCCTATATGACTTTCAGCGGCGACGTTAGGACTCGGGGAG
GAACGGAATTCACCACTGTGGATATCGAACTGGCTCGTCGGGAATCTCGC
TGGAGTGAATTTACTTCTATCGCTGCTCGTGCTCAATGGTTCCAGCAACC
GAACCAGGGACCGGCCACTCTGACGATGTTCTTGATGGACAGGGCCACCG
GAACTCCACTTCAAGGTTCTGAGCGGTCCATGACCATCAACCCTGGGGCG
GGCACTGGCTGCGCAGCTACGCCGGTAGGATTTGTGTTCATCAGTCGTGG
CTTGCAGAATACGCGCTTCATGCTCTCCACTGGCCAGTAA
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