Ggra10323.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10323.t1
Unique NameGgra10323.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length351
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:1205706..1206758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10323Ggra10323Gracilaria gracilis GNS1m malegenetig00000016_pilon 1205706..1206758 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10323.t1.start1Ggra10323.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 1205706..1205708 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10323.t1.CDS1Ggra10323.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 1205706..1206758 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10323.t1.exon1Ggra10323.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 1205706..1206758 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10323.t1.stop1Ggra10323.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 1206756..1206758 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10323.t1Ggra10323.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 1205706..1206758 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10323.t1 ID=Ggra10323.t1|Name=Ggra10323.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=351bp
MKFSRALCATLLCALALLHGARGDDYAADFLSSYLQPQAASSAPQSKPAL
LSGGGGGGIGIGIGSGIGALSFGASALGGAPAAAAAEAEAPAFARTAATA
AKVRAAVSIARETRCDAHVCFALSGDCALSRGAFRQQRELVKLLAAVLSL
DERAAFSAALYGARPRRRRRRAAPRRAEADDAQRGDAPRATTTRAAARVV
TIAPLSTDAGALLRRVHATRRPWCARAARGAAARGAAARGVARCARLLRA
ARGGGVSKMVLFGDGGDGGDDDDALRGAAARRFLARDGAGLCAVRVRAAT
RNDARRDDGDDARDDDAQRGVHVVTVGEWFQLVDVLDELVGAVCGKPAQF
*
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spliced messenger RNA

>Ggra10323.t1 ID=Ggra10323.t1|Name=Ggra10323.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1053bp|location=Sequence derived from alignment at tig00000016_pilon:1205706..1206758+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGTTCTCTCGCGCGCTTTGCGCCACGCTGCTGTGCGCGTTGGCGCT
GCTGCACGGCGCGCGCGGCGACGACTACGCCGCCGACTTTCTGTCGTCCT
ATCTGCAGCCGCAGGCGGCGTCATCGGCGCCGCAGTCCAAGCCAGCGCTG
CTGTCGGGCGGCGGCGGCGGCGGCATCGGGATCGGGATCGGCAGCGGGAT
CGGCGCGCTTTCGTTTGGCGCCTCTGCGCTGGGCGGCGCGCCCGCAGCGG
CGGCGGCGGAGGCGGAGGCGCCCGCGTTCGCGCGCACGGCGGCGACGGCA
GCCAAGGTGCGCGCGGCGGTATCCATCGCGCGCGAAACGCGCTGCGACGC
ACACGTGTGCTTCGCGCTGTCGGGCGACTGCGCGCTGTCGCGCGGCGCGT
TCCGCCAGCAGCGCGAGCTGGTCAAGCTGCTGGCGGCCGTGCTGTCGCTG
GACGAGCGCGCGGCGTTCAGCGCCGCGCTATACGGCGCGCGGCCACGACG
CCGACGACGACGGGCGGCGCCGCGGCGCGCGGAGGCGGACGACGCGCAAA
GAGGCGACGCGCCGCGCGCCACGACGACGCGCGCAGCAGCTCGCGTTGTT
ACCATCGCGCCGCTCAGCACGGACGCCGGCGCGTTGCTGCGGCGCGTGCA
CGCGACGCGTCGGCCGTGGTGCGCGCGCGCGGCGCGCGGCGCGGCGGCGC
GCGGCGCGGCGGCGCGCGGCGTGGCGCGTTGCGCGCGCCTGCTGCGCGCG
GCGCGCGGCGGCGGCGTGAGCAAGATGGTGCTGTTTGGCGACGGCGGCGA
CGGCGGCGACGACGACGACGCGCTGCGCGGCGCGGCGGCGCGGCGCTTCC
TGGCGCGCGACGGCGCGGGCTTGTGCGCCGTGCGTGTGCGCGCTGCGACG
CGCAACGACGCGCGCCGCGACGACGGCGACGACGCGCGCGACGACGACGC
GCAGCGCGGCGTGCACGTGGTGACGGTGGGCGAGTGGTTCCAGCTGGTGG
ACGTGCTTGATGAGCTGGTTGGCGCCGTCTGCGGCAAGCCGGCGCAGTTT
TGA
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protein sequence of Ggra10323.t1

>Ggra10323.t1 ID=Ggra10323.t1|Name=Ggra10323.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=351bp
MKFSRALCATLLCALALLHGARGDDYAADFLSSYLQPQAASSAPQSKPAL
LSGGGGGGIGIGIGSGIGALSFGASALGGAPAAAAAEAEAPAFARTAATA
AKVRAAVSIARETRCDAHVCFALSGDCALSRGAFRQQRELVKLLAAVLSL
DERAAFSAALYGARPRRRRRRAAPRRAEADDAQRGDAPRATTTRAAARVV
TIAPLSTDAGALLRRVHATRRPWCARAARGAAARGAAARGVARCARLLRA
ARGGGVSKMVLFGDGGDGGDDDDALRGAAARRFLARDGAGLCAVRVRAAT
RNDARRDDGDDARDDDAQRGVHVVTVGEWFQLVDVLDELVGAVCGKPAQF
*
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mRNA from alignment at tig00000016_pilon:1205706..1206758+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10323.t1 ID=Ggra10323.t1|Name=Ggra10323.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1053bp|location=Sequence derived from alignment at tig00000016_pilon:1205706..1206758+ (Gracilaria gracilis GNS1m male)
ATGAAGTTCTCTCGCGCGCTTTGCGCCACGCTGCTGTGCGCGTTGGCGCT
GCTGCACGGCGCGCGCGGCGACGACTACGCCGCCGACTTTCTGTCGTCCT
ATCTGCAGCCGCAGGCGGCGTCATCGGCGCCGCAGTCCAAGCCAGCGCTG
CTGTCGGGCGGCGGCGGCGGCGGCATCGGGATCGGGATCGGCAGCGGGAT
CGGCGCGCTTTCGTTTGGCGCCTCTGCGCTGGGCGGCGCGCCCGCAGCGG
CGGCGGCGGAGGCGGAGGCGCCCGCGTTCGCGCGCACGGCGGCGACGGCA
GCCAAGGTGCGCGCGGCGGTATCCATCGCGCGCGAAACGCGCTGCGACGC
ACACGTGTGCTTCGCGCTGTCGGGCGACTGCGCGCTGTCGCGCGGCGCGT
TCCGCCAGCAGCGCGAGCTGGTCAAGCTGCTGGCGGCCGTGCTGTCGCTG
GACGAGCGCGCGGCGTTCAGCGCCGCGCTATACGGCGCGCGGCCACGACG
CCGACGACGACGGGCGGCGCCGCGGCGCGCGGAGGCGGACGACGCGCAAA
GAGGCGACGCGCCGCGCGCCACGACGACGCGCGCAGCAGCTCGCGTTGTT
ACCATCGCGCCGCTCAGCACGGACGCCGGCGCGTTGCTGCGGCGCGTGCA
CGCGACGCGTCGGCCGTGGTGCGCGCGCGCGGCGCGCGGCGCGGCGGCGC
GCGGCGCGGCGGCGCGCGGCGTGGCGCGTTGCGCGCGCCTGCTGCGCGCG
GCGCGCGGCGGCGGCGTGAGCAAGATGGTGCTGTTTGGCGACGGCGGCGA
CGGCGGCGACGACGACGACGCGCTGCGCGGCGCGGCGGCGCGGCGCTTCC
TGGCGCGCGACGGCGCGGGCTTGTGCGCCGTGCGTGTGCGCGCTGCGACG
CGCAACGACGCGCGCCGCGACGACGGCGACGACGCGCGCGACGACGACGC
GCAGCGCGGCGTGCACGTGGTGACGGTGGGCGAGTGGTTCCAGCTGGTGG
ACGTGCTTGATGAGCTGGTTGGCGCCGTCTGCGGCAAGCCGGCGCAGTTT
TGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:1205706..1206758+

>Ggra10323.t1 ID=Ggra10323.t1|Name=Ggra10323.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1053bp|location=Sequence derived from alignment at tig00000016_pilon:1205706..1206758+ (Gracilaria gracilis GNS1m male)
ATGAAGTTCTCTCGCGCGCTTTGCGCCACGCTGCTGTGCGCGTTGGCGCT
GCTGCACGGCGCGCGCGGCGACGACTACGCCGCCGACTTTCTGTCGTCCT
ATCTGCAGCCGCAGGCGGCGTCATCGGCGCCGCAGTCCAAGCCAGCGCTG
CTGTCGGGCGGCGGCGGCGGCGGCATCGGGATCGGGATCGGCAGCGGGAT
CGGCGCGCTTTCGTTTGGCGCCTCTGCGCTGGGCGGCGCGCCCGCAGCGG
CGGCGGCGGAGGCGGAGGCGCCCGCGTTCGCGCGCACGGCGGCGACGGCA
GCCAAGGTGCGCGCGGCGGTATCCATCGCGCGCGAAACGCGCTGCGACGC
ACACGTGTGCTTCGCGCTGTCGGGCGACTGCGCGCTGTCGCGCGGCGCGT
TCCGCCAGCAGCGCGAGCTGGTCAAGCTGCTGGCGGCCGTGCTGTCGCTG
GACGAGCGCGCGGCGTTCAGCGCCGCGCTATACGGCGCGCGGCCACGACG
CCGACGACGACGGGCGGCGCCGCGGCGCGCGGAGGCGGACGACGCGCAAA
GAGGCGACGCGCCGCGCGCCACGACGACGCGCGCAGCAGCTCGCGTTGTT
ACCATCGCGCCGCTCAGCACGGACGCCGGCGCGTTGCTGCGGCGCGTGCA
CGCGACGCGTCGGCCGTGGTGCGCGCGCGCGGCGCGCGGCGCGGCGGCGC
GCGGCGCGGCGGCGCGCGGCGTGGCGCGTTGCGCGCGCCTGCTGCGCGCG
GCGCGCGGCGGCGGCGTGAGCAAGATGGTGCTGTTTGGCGACGGCGGCGA
CGGCGGCGACGACGACGACGCGCTGCGCGGCGCGGCGGCGCGGCGCTTCC
TGGCGCGCGACGGCGCGGGCTTGTGCGCCGTGCGTGTGCGCGCTGCGACG
CGCAACGACGCGCGCCGCGACGACGGCGACGACGCGCGCGACGACGACGC
GCAGCGCGGCGTGCACGTGGTGACGGTGGGCGAGTGGTTCCAGCTGGTGG
ACGTGCTTGATGAGCTGGTTGGCGCCGTCTGCGGCAAGCCGGCGCAGTTT
TGA
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