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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra1032.t1.stop1 | Ggra1032.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000027_pilon 693655..693657 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra1032.t1.start1 | Ggra1032.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000027_pilon 696723..696725 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1032.t1 ID=Ggra1032.t1|Name=Ggra1032.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=289bp MGKYTVQQPAECVRMKAVRSANKTDWRYESGWKLHVGTLDNTFNATQRRP FAQPQQGSLHTPPSGIGLAHLPRLGVPLQSPCFVQGSHSFGFEEGDGATL RLGDGFAERLDEGDGLGLLLDDGFAERLDEGDGLGLLLGDGLAERLDEGE GLGLLLSDGFAERLDDGDGRGLLLGDGRAERLDDGDGLRVRLDEGDGLVK LKVPIDEDGSMGINGNDDTDGCDCADLRADAVARRDALERGENVSMESGS AEEAVGEERATNVHIAKLEGLVRLHGCTFGDSDRKDRL* back to topspliced messenger RNA >Ggra1032.t1 ID=Ggra1032.t1|Name=Ggra1032.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=867bp|location=Sequence derived from alignment at tig00000027_pilon:693655..696725- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCAAGTACACGGTACAACAGCCAGCTGAGTGTGTGCGCATGAAAGC GGTGCGATCGGCAAACAAAACAGACTGGCGTTATGAGAGCGGCTGGAAGC TACACGTAGGGACGCTTGACAATACCTTCAACGCAACGCAACGCAGACCC TTTGCACAACCCCAGCAAGGATCGTTACACACACCTCCTTCCGGCATAGG CTTGGCGCACTTGCCACGACTCGGGGTGCCACTACAGTCGCCGTGCTTTG TGCAGGGCTCGCATAGCTTTGGCTTTGAAGAGGGTGACGGAGCGACGCTG CGGCTGGGCGATGGCTTTGCGGAGCGGCTAGACGAAGGCGACGGCCTCGG GCTGTTGCTGGATGATGGCTTTGCGGAGCGACTGGACGAGGGCGACGGTC TTGGGCTCCTGCTGGGTGATGGCCTTGCGGAGCGGCTGGACGAGGGTGAG GGCCTTGGGCTGTTGCTGAGCGATGGCTTTGCGGAGCGGCTGGACGACGG AGATGGTCGAGGGCTGCTGCTGGGCGACGGGCGTGCAGAACGGCTGGATG ACGGCGACGGACTCAGAGTGCGACTGGACGAAGGCGATGGATTGGTGAAA CTGAAGGTTCCGATTGATGAAGATGGAAGCATGGGCATCAATGGAAATGA CGACACTGATGGCTGTGATTGTGCGGATCTCAGAGCTGATGCTGTAGCAC GCAGAGACGCACTGGAGCGCGGCGAGAATGTCTCAATGGAGTCAGGAAGT GCGGAGGAGGCTGTTGGGGAAGAGAGAGCCACTAACGTTCACATAGCTAA GCTTGAAGGCCTTGTGCGGTTGCATGGCTGCACATTTGGTGATTCTGATC GCAAGGATCGCCTGTGA back to topprotein sequence of Ggra1032.t1 >Ggra1032.t1 ID=Ggra1032.t1|Name=Ggra1032.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=289bp
MGKYTVQQPAECVRMKAVRSANKTDWRYESGWKLHVGTLDNTFNATQRRP FAQPQQGSLHTPPSGIGLAHLPRLGVPLQSPCFVQGSHSFGFEEGDGATL RLGDGFAERLDEGDGLGLLLDDGFAERLDEGDGLGLLLGDGLAERLDEGE GLGLLLSDGFAERLDDGDGRGLLLGDGRAERLDDGDGLRVRLDEGDGLVK LKVPIDEDGSMGINGNDDTDGCDCADLRADAVARRDALERGENVSMESGS AEEAVGEERATNVHIAKLEGLVRLHGCTFGDSDRKDRL* back to topmRNA from alignment at tig00000027_pilon:693655..696725- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1032.t1 ID=Ggra1032.t1|Name=Ggra1032.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3071bp|location=Sequence derived from alignment at tig00000027_pilon:693655..696725- (Gracilaria gracilis GNS1m male) ATGGGCAAGTACACGGTACAACAGCCAGCTGAGTGTGTGCGCATGAAAGC
GGTGCGATCGGCAAACAAAACAGACTGGCGTTATGAGAGCGGCTGGAAGC
TACACGTAGGGACGCTTGACAATACCTTCAACGCAACGCAACGCAGACCC
TTTGCACAACCCCAGCAAGGATCGTTACACACACCTCCTTCCGGCATAGG
CTTGGCGCACTTGCCACGACTCGGGTCTGAATCCAATGGCCTGCACACCA
GACCATCCAAACTGTCGGCATCATGCACACAATAGCCGCACTTGGGGTTA
CGCGCCACGCAGCGATAGTACTTGGAGCATCGTTGGTGAGGCGGACACAT
GATACAAGCGTCTCCATTTCCACCGCCGTCAGGATCGCACCACGAGCCGC
TGAATAACACTCTTGCGCATCGGTTGGTCTGCAGATGACATTCCAGGGTG
CCACTACAGTCGCCGTGCTTTGTGCAGGGCTCGCATAGCTTTGGCTTTGA
AGAGGGTGACGGAGCGACGCTGCGGCTGGGCGATGGCTTTGCGGAGCGGC
TAGACGAAGGCGACGGCCTCGGGCTGTTGCTGGATGATGGCTTTGCGGAG
CGACTGGACGAGGGCGACGGTCTTGGGCTCCTGCTGGGTGATGGCCTTGC
GGAGCGGCTGGACGAGGGTGAGGGCCTTGGGCTGTTGCTGAGCGATGGCT
TTGCGGAGCGGCTGGACGACGGAGATGGTCGAGGGCTGCTGCTGGGCGAC
GGGCGTGCAGAACGGCTGGATGACGGCGACGGACTCAGAGTGCGACTGGA
CGAAGGCGATGGGTGCGGACTTCGGCTTGGCGACGGCCTCGGCGTGCGAC
TGGACGACGGCGACGGGCGACAGCTATGGCTCGCACTCGGCGACGGCTTT
AGCGGCGGCGGCGGCCTCTTACAAGACCCGCGGTGGCACACCAACCCCCT
CCGACAAACCCAACACGGGTCATCACAGCGCTTGCCGACCGCCATCGGCA
CGGAGCATGTGCCCCTCGCGCAAGCAAGCGCGCGCTGACAACGAACGCCC
CTCGAGCAGCGCGCGCACTTGGGTGTCGGCCGATGCGCGCATCGCGCGCT
TCGACAAAGCAGCCCGCGCGGACACGCCCATCAAGCGTCGTCGCAGCGCT
TTCCGGCCGGCACAGGCACTGCGCAGCGTGCCTTCTCGCACACAGGCGCG
CGACGATAATGAGCGGCCTTACCACATCTCGCGCACTTTGCGCGCTTGTT
CGGTACGCACGTTCCAAGCCGACACACCAGCCCGCGCGCACACGCGGCGC
ACCGGCGCCGGCAAGGGCTTGCTTTGGCGACGCGGCGCACGCAGCGCGGC
GACGCGGCGCACGCAGCGCGCACGCCGGCAATGCAGCGCTCGCGCGCAGC
GCGCGCGGCTCGAACAGCGCGCACGCAGCGGGGCGTGCATGAGCGACCAC
GCGAGCCATTGAGCCGCGAACGCGCCACGCAGCGACCAGAACGACAGACG
AGACCGCGCTCGTAGTGCGACGGGTGGCGACACTTGCCGCAGCGACGCTG
GCGCGCGGGAGGACGCGGCAGCGACGGCGGACGCTTGCGGGCTGTCGGCG
GACGCTTGCGAGTAAACGGCGGACGCTTGCGAGCTGTCGGCGGACGCTTG
CGAGCAAACGGCAGCTTGGTGCGAGGCAGCGTGACGCGCGGCGGTGCGGC
TTGCGGTGCTGCGGAGAGGAGCGGCGATATTCTCGCCGCGCGGCGGACTG
GTGACGGGGCCGCGACGACGACGCGGCTCGCGCGTGGGCTTCGGGGTTGC
AAGTGGGCTTCGGCTTGCGCTTGGGCTTCCGGCGCATCAACTTGAATTTT
ATTAATTAAATGTGTCAACATTGTGTGACGGCGGCTTGTGACGGCGGCTT
GCTCTCCTTGTGCTTGCTGTGCTGGTGGTGCTTTTTCGCGCGCTTCTTGT
TCGCGTGGCGCACAAGCGGCAGCGGCCGCGACTGCGACTGCGACCGCGCC
TCGCCGTCACAACGCGCCACGGCAGCGCGTCCGCCAGACGCCGGGAGCGC
AGCGTCAGCGTCAGCCCCCAACCGCAACCAGCAACAACGCAACCGAGCGC
CTGGCGAAAGCAATGACGAGCGAAAGCAATGACGAGCGAAAGCAACGACG
AGCCGCACAACAACACCAACGTCTCGGCGAGCGCAGTGCGTTTGCGAAGG
GCGCACGAGCGGACGGCACCCCCGGCGGCGTGCCGCATCGCTCGCTCAAG
TACGGCGGAGGGGCGCGCCCGCAACAACGAGCGGCGGCGCGCGGTGGAGG
TCACACAGCAAGAGTGCTGTGTTTGGCATTGAGCGCGGATGGGAAGCGAG
TGCTGTCAGCATCATTGGACAAGACGGTTCGAGTTTGGGACGCGAACAGC
GGAGCAGCCGTCGGCAAGCCATTTGTTCATTACGCTCCAGTTGACTATGT
GCGAACGGATGCGAATGGTCTGCATATTGTGTCGTACGAATACGGCGGTT
ATGGACGACTGTGGGACGTGACAAGCGGCGAGTGCGAAACGGCGAGCTGT
GTTTTCTCGTGGACCACAACTCTGCGTCGTCTCGCACTTGCTCACTTTCA
TGTTAGTAGAAACAAGCGCGCGCAGAACATTTACCCTATCCGAAGCCATG
AGCGAATACTGGCATCGCCAGATACACCCGTGTTTCGAGTTGGAGACACA
TTCGTTACCTGGCCGCATGGCCCAATGTCCGTGCCTTTTTGCAAAGTCAT
AACGTAGACTAACAACTCTTTTACTCTTTATGACCCGTGTCGAGATTGGT
GAAACTGAAGGTTCCGATTGATGAAGATGGAAGCATGGGCATCAATGGAA
ATGACGACACTGATGGCTGTGATTGTGCGGATCTCAGAGCTGATGCTGTA
GCACGCAGAGACGCACTGGAGCGCGGCGAGAATGTCTCAATGGAGTCAGG
AAGTGCGGAGGAGGCTGTTGGGGAAGAGAGAGCCACTAACGTTCACATAG
CTAAGCTTGAAGGCCTTGTGCGGTTGCATGGCTGCACATTTGGTGATTCT
GATCGCAAGGATCGCCTGTGA back to topCoding sequence (CDS) from alignment at tig00000027_pilon:693655..696725- >Ggra1032.t1 ID=Ggra1032.t1|Name=Ggra1032.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=867bp|location=Sequence derived from alignment at tig00000027_pilon:693655..696725- (Gracilaria gracilis GNS1m male) ATGGGCAAGTACACGGTACAACAGCCAGCTGAGTGTGTGCGCATGAAAGC GGTGCGATCGGCAAACAAAACAGACTGGCGTTATGAGAGCGGCTGGAAGC TACACGTAGGGACGCTTGACAATACCTTCAACGCAACGCAACGCAGACCC TTTGCACAACCCCAGCAAGGATCGTTACACACACCTCCTTCCGGCATAGG CTTGGCGCACTTGCCACGACTCGGGGTGCCACTACAGTCGCCGTGCTTTG TGCAGGGCTCGCATAGCTTTGGCTTTGAAGAGGGTGACGGAGCGACGCTG CGGCTGGGCGATGGCTTTGCGGAGCGGCTAGACGAAGGCGACGGCCTCGG GCTGTTGCTGGATGATGGCTTTGCGGAGCGACTGGACGAGGGCGACGGTC TTGGGCTCCTGCTGGGTGATGGCCTTGCGGAGCGGCTGGACGAGGGTGAG GGCCTTGGGCTGTTGCTGAGCGATGGCTTTGCGGAGCGGCTGGACGACGG AGATGGTCGAGGGCTGCTGCTGGGCGACGGGCGTGCAGAACGGCTGGATG ACGGCGACGGACTCAGAGTGCGACTGGACGAAGGCGATGGATTGGTGAAA CTGAAGGTTCCGATTGATGAAGATGGAAGCATGGGCATCAATGGAAATGA CGACACTGATGGCTGTGATTGTGCGGATCTCAGAGCTGATGCTGTAGCAC GCAGAGACGCACTGGAGCGCGGCGAGAATGTCTCAATGGAGTCAGGAAGT GCGGAGGAGGCTGTTGGGGAAGAGAGAGCCACTAACGTTCACATAGCTAA GCTTGAAGGCCTTGTGCGGTTGCATGGCTGCACATTTGGTGATTCTGATC GCAAGGATCGCCTGTGA back to top
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