Ggra10319.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10319.t1
Unique NameGgra10319.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:899284..900039 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10319Ggra10319Gracilaria gracilis GNS1m malegenetig00000016_pilon 899284..900039 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10319.t1.start1Ggra10319.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 899284..899286 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10319.t1.CDS1Ggra10319.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 899284..900039 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10319.t1.exon1Ggra10319.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 899284..900039 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10319.t1.stop1Ggra10319.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 900037..900039 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10319.t1Ggra10319.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 899284..900039 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10319.t1 ID=Ggra10319.t1|Name=Ggra10319.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=252bp
MLRTSMFIPLFAAIFLLGCSASGTPIRDPTIPPWPEILQSRTETLLEENA
VAKDLGADLVLKIQQNIVRNGRCNRRACYAIDGSASVPPVAFEFQKDLVK
LLAVFSALDDEAEFSAVQYGLANRDISLETSNITEFVTRVEGATQANASR
TFVSAGIGSCLRRIRRGSGQTAEGTVFVLGDGRANFGLEFLDEVLAEVQD
ETIVAVGFGNFDRQLLERIASGEDDVFLLGTYTNFEMIVYSLLLNVCTFG
S*
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spliced messenger RNA

>Ggra10319.t1 ID=Ggra10319.t1|Name=Ggra10319.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00000016_pilon:899284..900039+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGCGTACATCTATGTTTATCCCGCTCTTTGCAGCTATCTTTCTGCT
CGGGTGTTCGGCTTCCGGAACACCCATTCGCGATCCGACCATTCCTCCGT
GGCCCGAAATCCTGCAAAGTCGCACTGAAACGCTCCTTGAGGAGAACGCC
GTCGCAAAGGACCTGGGCGCGGATCTGGTGCTCAAGATTCAACAGAACAT
CGTCCGAAACGGCAGATGTAATCGCCGCGCTTGTTACGCGATCGATGGAA
GCGCATCTGTTCCGCCAGTCGCCTTCGAGTTCCAGAAGGATTTGGTCAAG
TTGCTGGCCGTGTTCTCCGCGCTCGACGACGAGGCAGAGTTCTCTGCAGT
GCAGTACGGGCTTGCTAATCGCGACATCTCGCTGGAAACGTCGAATATCA
CCGAGTTCGTTACACGCGTCGAGGGTGCGACACAGGCAAATGCGAGCCGG
ACGTTTGTTTCGGCCGGAATTGGAAGTTGTCTTCGTCGTATTCGACGTGG
GTCGGGCCAGACTGCTGAAGGAACTGTGTTCGTTCTAGGAGATGGACGTG
CCAACTTCGGGTTGGAGTTTCTGGATGAGGTGTTGGCGGAGGTGCAGGAT
GAGACTATTGTCGCGGTAGGGTTTGGCAACTTTGATAGACAGTTGCTGGA
GAGAATTGCGAGCGGTGAAGATGATGTGTTCTTGCTGGGAACGTACACTA
ACTTTGAGATGATTGTGTATTCTTTGCTGCTCAATGTCTGTACGTTCGGG
TCTTGA
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protein sequence of Ggra10319.t1

>Ggra10319.t1 ID=Ggra10319.t1|Name=Ggra10319.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MLRTSMFIPLFAAIFLLGCSASGTPIRDPTIPPWPEILQSRTETLLEENA
VAKDLGADLVLKIQQNIVRNGRCNRRACYAIDGSASVPPVAFEFQKDLVK
LLAVFSALDDEAEFSAVQYGLANRDISLETSNITEFVTRVEGATQANASR
TFVSAGIGSCLRRIRRGSGQTAEGTVFVLGDGRANFGLEFLDEVLAEVQD
ETIVAVGFGNFDRQLLERIASGEDDVFLLGTYTNFEMIVYSLLLNVCTFG
S*
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mRNA from alignment at tig00000016_pilon:899284..900039+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10319.t1 ID=Ggra10319.t1|Name=Ggra10319.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00000016_pilon:899284..900039+ (Gracilaria gracilis GNS1m male)
ATGTTGCGTACATCTATGTTTATCCCGCTCTTTGCAGCTATCTTTCTGCT
CGGGTGTTCGGCTTCCGGAACACCCATTCGCGATCCGACCATTCCTCCGT
GGCCCGAAATCCTGCAAAGTCGCACTGAAACGCTCCTTGAGGAGAACGCC
GTCGCAAAGGACCTGGGCGCGGATCTGGTGCTCAAGATTCAACAGAACAT
CGTCCGAAACGGCAGATGTAATCGCCGCGCTTGTTACGCGATCGATGGAA
GCGCATCTGTTCCGCCAGTCGCCTTCGAGTTCCAGAAGGATTTGGTCAAG
TTGCTGGCCGTGTTCTCCGCGCTCGACGACGAGGCAGAGTTCTCTGCAGT
GCAGTACGGGCTTGCTAATCGCGACATCTCGCTGGAAACGTCGAATATCA
CCGAGTTCGTTACACGCGTCGAGGGTGCGACACAGGCAAATGCGAGCCGG
ACGTTTGTTTCGGCCGGAATTGGAAGTTGTCTTCGTCGTATTCGACGTGG
GTCGGGCCAGACTGCTGAAGGAACTGTGTTCGTTCTAGGAGATGGACGTG
CCAACTTCGGGTTGGAGTTTCTGGATGAGGTGTTGGCGGAGGTGCAGGAT
GAGACTATTGTCGCGGTAGGGTTTGGCAACTTTGATAGACAGTTGCTGGA
GAGAATTGCGAGCGGTGAAGATGATGTGTTCTTGCTGGGAACGTACACTA
ACTTTGAGATGATTGTGTATTCTTTGCTGCTCAATGTCTGTACGTTCGGG
TCTTGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:899284..900039+

>Ggra10319.t1 ID=Ggra10319.t1|Name=Ggra10319.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=756bp|location=Sequence derived from alignment at tig00000016_pilon:899284..900039+ (Gracilaria gracilis GNS1m male)
ATGTTGCGTACATCTATGTTTATCCCGCTCTTTGCAGCTATCTTTCTGCT
CGGGTGTTCGGCTTCCGGAACACCCATTCGCGATCCGACCATTCCTCCGT
GGCCCGAAATCCTGCAAAGTCGCACTGAAACGCTCCTTGAGGAGAACGCC
GTCGCAAAGGACCTGGGCGCGGATCTGGTGCTCAAGATTCAACAGAACAT
CGTCCGAAACGGCAGATGTAATCGCCGCGCTTGTTACGCGATCGATGGAA
GCGCATCTGTTCCGCCAGTCGCCTTCGAGTTCCAGAAGGATTTGGTCAAG
TTGCTGGCCGTGTTCTCCGCGCTCGACGACGAGGCAGAGTTCTCTGCAGT
GCAGTACGGGCTTGCTAATCGCGACATCTCGCTGGAAACGTCGAATATCA
CCGAGTTCGTTACACGCGTCGAGGGTGCGACACAGGCAAATGCGAGCCGG
ACGTTTGTTTCGGCCGGAATTGGAAGTTGTCTTCGTCGTATTCGACGTGG
GTCGGGCCAGACTGCTGAAGGAACTGTGTTCGTTCTAGGAGATGGACGTG
CCAACTTCGGGTTGGAGTTTCTGGATGAGGTGTTGGCGGAGGTGCAGGAT
GAGACTATTGTCGCGGTAGGGTTTGGCAACTTTGATAGACAGTTGCTGGA
GAGAATTGCGAGCGGTGAAGATGATGTGTTCTTGCTGGGAACGTACACTA
ACTTTGAGATGATTGTGTATTCTTTGCTGCTCAATGTCTGTACGTTCGGG
TCTTGA
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