Ggra10305.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10305.t1
Unique NameGgra10305.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length153
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:644222..644680 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10305Ggra10305Gracilaria gracilis GNS1m malegenetig00000016_pilon 644222..645748 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10305.t1.stop1Ggra10305.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 644222..644224 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10305.t1.CDS1Ggra10305.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 644222..644680 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10305.t1.exon1Ggra10305.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 644222..644680 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10305.t1.start1Ggra10305.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 644678..644680 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10305.t1Ggra10305.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 644222..644680 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10305.t1 ID=Ggra10305.t1|Name=Ggra10305.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=153bp
MAGQAAHKDASEKAEATQRGLSADKDALHSNVQQLEQRTAALDKQVAELS
VALRDVELERDAVRQDREELREELRLARTELEDWMREMKGDVEPSPDVAA
ADTPDVAVADTPDGVDGGGADAAAGMNGGVSADGDHDVPQAAEEGASEGA
AA*
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spliced messenger RNA

>Ggra10305.t1 ID=Ggra10305.t1|Name=Ggra10305.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=459bp|location=Sequence derived from alignment at tig00000016_pilon:644222..644680- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGGCCAGGCGGCGCACAAGGACGCCAGTGAGAAGGCGGAGGCCAC
GCAGAGGGGGCTGAGCGCGGACAAGGACGCGCTGCACTCAAACGTGCAGC
AGCTGGAGCAGCGCACGGCCGCGCTGGACAAGCAGGTGGCCGAGCTCAGC
GTCGCGCTCAGGGACGTGGAGCTGGAGAGGGACGCCGTGAGGCAGGACCG
GGAGGAGCTGCGCGAGGAGCTGCGCCTCGCGCGCACCGAACTGGAAGACT
GGATGCGCGAGATGAAGGGCGACGTCGAGCCCTCCCCGGACGTTGCTGCC
GCTGATACGCCGGACGTTGCTGTCGCTGATACGCCGGACGGCGTGGACGG
CGGCGGCGCGGATGCTGCCGCTGGCATGAACGGCGGCGTGTCGGCGGACG
GCGACCACGACGTGCCGCAGGCGGCGGAGGAGGGCGCCTCGGAGGGCGCT
GCGGCGTGA
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protein sequence of Ggra10305.t1

>Ggra10305.t1 ID=Ggra10305.t1|Name=Ggra10305.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=153bp
MAGQAAHKDASEKAEATQRGLSADKDALHSNVQQLEQRTAALDKQVAELS
VALRDVELERDAVRQDREELREELRLARTELEDWMREMKGDVEPSPDVAA
ADTPDVAVADTPDGVDGGGADAAAGMNGGVSADGDHDVPQAAEEGASEGA
AA*
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mRNA from alignment at tig00000016_pilon:644222..644680-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10305.t1 ID=Ggra10305.t1|Name=Ggra10305.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=459bp|location=Sequence derived from alignment at tig00000016_pilon:644222..644680- (Gracilaria gracilis GNS1m male)
ATGGCCGGCCAGGCGGCGCACAAGGACGCCAGTGAGAAGGCGGAGGCCAC
GCAGAGGGGGCTGAGCGCGGACAAGGACGCGCTGCACTCAAACGTGCAGC
AGCTGGAGCAGCGCACGGCCGCGCTGGACAAGCAGGTGGCCGAGCTCAGC
GTCGCGCTCAGGGACGTGGAGCTGGAGAGGGACGCCGTGAGGCAGGACCG
GGAGGAGCTGCGCGAGGAGCTGCGCCTCGCGCGCACCGAACTGGAAGACT
GGATGCGCGAGATGAAGGGCGACGTCGAGCCCTCCCCGGACGTTGCTGCC
GCTGATACGCCGGACGTTGCTGTCGCTGATACGCCGGACGGCGTGGACGG
CGGCGGCGCGGATGCTGCCGCTGGCATGAACGGCGGCGTGTCGGCGGACG
GCGACCACGACGTGCCGCAGGCGGCGGAGGAGGGCGCCTCGGAGGGCGCT
GCGGCGTGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:644222..644680-

>Ggra10305.t1 ID=Ggra10305.t1|Name=Ggra10305.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=459bp|location=Sequence derived from alignment at tig00000016_pilon:644222..644680- (Gracilaria gracilis GNS1m male)
ATGGCCGGCCAGGCGGCGCACAAGGACGCCAGTGAGAAGGCGGAGGCCAC
GCAGAGGGGGCTGAGCGCGGACAAGGACGCGCTGCACTCAAACGTGCAGC
AGCTGGAGCAGCGCACGGCCGCGCTGGACAAGCAGGTGGCCGAGCTCAGC
GTCGCGCTCAGGGACGTGGAGCTGGAGAGGGACGCCGTGAGGCAGGACCG
GGAGGAGCTGCGCGAGGAGCTGCGCCTCGCGCGCACCGAACTGGAAGACT
GGATGCGCGAGATGAAGGGCGACGTCGAGCCCTCCCCGGACGTTGCTGCC
GCTGATACGCCGGACGTTGCTGTCGCTGATACGCCGGACGGCGTGGACGG
CGGCGGCGCGGATGCTGCCGCTGGCATGAACGGCGGCGTGTCGGCGGACG
GCGACCACGACGTGCCGCAGGCGGCGGAGGAGGGCGCCTCGGAGGGCGCT
GCGGCGTGA
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