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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 130081.XP_005709346.1 |
PFAMs | PBD,PH,Pkinase |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K04409,ko:K08286 |
KEGG Pathway | ko04010,ko04011,ko04012,ko04014,ko04024,ko04062,ko04360,ko04392,ko04510,ko04650,ko04660,ko04666,ko04810,ko05120,ko05205,ko05211,map04010,map04011,map04012,map04014,map04024,map04062,map04360,map04392,map04510,map04650,map04660,map04666,map04810,map05120,map05205,map05211 |
GOs | GO:0000278,GO:0000281,GO:0000910,GO:0001891,GO:0001932,GO:0001934,GO:0003674,GO:0003779,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007049,GO:0007154,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0007346,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009267,GO:0009605,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010562,GO:0010564,GO:0010604,GO:0010646,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016905,GO:0017016,GO:0017022,GO:0017048,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0022402,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0030010,GO:0030029,GO:0030036,GO:0030100,GO:0030587,GO:0031033,GO:0031034,GO:0031036,GO:0031038,GO:0031098,GO:0031152,GO:0031156,GO:0031252,GO:0031254,GO:0031267,GO:0031272,GO:0031273,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0032147,GO:0032153,GO:0032154,GO:0032155,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032502,GO:0032781,GO:0032879,GO:0033036,GO:0033554,GO:0033674,GO:0034613,GO:0034622,GO:0035556,GO:0036211,GO:0040011,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042594,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043327,GO:0043408,GO:0043412,GO:0043462,GO:0043549,GO:0043900,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044764,GO:0044877,GO:0045159,GO:0045787,GO:0045807,GO:0045859,GO:0045860,GO:0045937,GO:0046777,GO:0048365,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048856,GO:0048870,GO:0050764,GO:0050766,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051015,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051302,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051641,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0060255,GO:0060491,GO:0060627,GO:0061640,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090068,GO:0090702,GO:0097204,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0099120,GO:0099568,GO:0120032,GO:0120033,GO:0120035,GO:0140096,GO:1901564,GO:1902463,GO:1902531,GO:1903047 |
Evalue | 1.52e-77 |
EggNOG OGs | KOG0578@1|root,KOG0578@2759|Eukaryota |
EC | 2.7.11.1 |
Description | Rac GTPase binding |
COG category | F |
BRITE | ko00000,ko00001,ko01000,ko01001,ko03036,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10211.t1.start1 | Ggra10211.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 99327..99329 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10211.t1.stop1 | Ggra10211.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 101394..101396 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10211.t1 ID=Ggra10211.t1|Name=Ggra10211.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=690bp MLRKILAPLKETPNHPAAQISPSKMRRYTRGKENQASPPAVHVSEPYDFR LIAHVECDPNTGLYKGIDEFMTRAVIPRGRRSPDKSNPGGSPPALPLPPL RSFSEHRADQSSRESSPTSTPTQSPQRVSRPAVASPRQSPRRQKAALVSA NKPPLAVQRRSPHGSESQVSRPFRMRHEVHVCVDPQSPTGFAGLPGAWET ILMYSGILRDEAVAHPQAVFDVLQFSKTSDPTLGTRQDVRDSLSKALPPI FLEKMQTPSLTSFDDGTDDLFSRSDSYHVDIPDAESPPPRAVTSKHEPLR DRPSPPFPFANVERRTGSPSQSPSPEKDVETCVVNELDSDYMESFIGAER RQNLPDAIPEHLDASFRHDDPNKLFTRMEQIGEGSCGNVFRAVDGNGRFV ALKRVKPENERDWKLYKFEVQVMQDHHDSENLVECYDSFRCGNELWIVME YVSAGTLADLLLGRRVSAPTHGRQSASSSSSASVQLEPMEESVIAYICRE VLKGLEGLHAIRRLHRDIKGDNVLLDMDGSVKVADFGFCAELSKRSGKRN TVVGTPFWMAPEVIRGCNYDCKVDIWSTGILAYECANGKPPHIDVSPIRA MFLIATQGAPELSDAQQWSRELRDFIRSCCAIKAADRPSAQQALAHPFIA KACEPADAASFFSEALEQRMVSRRKVMSRVLTSEGFREE* back to topspliced messenger RNA >Ggra10211.t1 ID=Ggra10211.t1|Name=Ggra10211.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2070bp|location=Sequence derived from alignment at tig00000016_pilon:99327..101396+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGCGCAAAATCCTCGCTCCCCTCAAGGAGACCCCCAACCACCCAGC AGCCCAAATCTCGCCGTCCAAGATGCGCCGCTACACGCGCGGCAAGGAGA ACCAGGCCTCCCCGCCCGCCGTTCACGTTTCGGAACCGTATGACTTTCGT CTCATCGCCCACGTCGAATGCGACCCCAACACCGGGCTGTACAAGGGCAT TGACGAGTTCATGACGCGCGCCGTCATTCCTCGCGGCCGACGCAGCCCAG ACAAATCCAACCCGGGCGGCTCCCCGCCGGCTTTACCTCTCCCTCCGCTC CGAAGCTTCTCTGAACATCGCGCAGACCAATCCAGTCGCGAGTCTTCTCC GACTTCAACTCCCACCCAATCGCCTCAGAGAGTGTCGCGTCCTGCAGTTG CCTCCCCTCGTCAGTCGCCCCGCCGTCAAAAGGCCGCGCTAGTATCTGCA AACAAGCCCCCTTTGGCCGTTCAGCGGCGGTCACCGCACGGCTCAGAAAG TCAAGTGTCACGTCCGTTCCGAATGCGTCATGAGGTTCACGTCTGCGTTG ATCCGCAAAGTCCCACCGGATTTGCAGGATTGCCCGGAGCTTGGGAAACA ATTCTCATGTACTCCGGAATATTGCGAGACGAGGCCGTCGCACACCCGCA GGCTGTGTTTGACGTGCTTCAATTCTCCAAGACATCTGACCCCACGCTAG GAACCAGACAGGATGTGCGCGATTCGCTGTCCAAGGCTCTTCCACCAATC TTCTTGGAAAAGATGCAAACACCCAGTCTTACTTCGTTCGATGACGGCAC CGACGACCTTTTCAGTCGCTCGGACAGCTACCACGTGGACATTCCCGACG CTGAATCGCCGCCCCCACGGGCAGTCACTTCGAAGCATGAGCCGCTACGC GATAGACCATCGCCCCCCTTCCCGTTTGCAAACGTTGAGAGGCGTACAGG GTCACCGTCTCAGTCACCGTCACCAGAGAAGGACGTGGAAACCTGCGTCG TGAATGAGCTGGATTCCGATTACATGGAGAGCTTCATCGGCGCTGAAAGG CGGCAAAACCTGCCTGATGCGATTCCCGAACACCTTGACGCCAGCTTCCG CCATGATGACCCCAACAAACTATTCACGCGAATGGAGCAAATTGGCGAAG GATCTTGTGGCAATGTATTCCGCGCGGTTGATGGCAATGGCCGGTTTGTG GCACTCAAACGCGTCAAGCCGGAGAACGAGCGTGACTGGAAGCTTTACAA ATTCGAAGTACAAGTTATGCAGGATCACCACGATTCCGAAAACCTGGTAG AATGCTACGATTCTTTCCGATGTGGCAACGAGCTGTGGATTGTGATGGAA TACGTTTCGGCTGGTACTTTGGCAGATTTGCTTTTGGGCAGGCGTGTTTC AGCTCCAACCCATGGTCGACAGAGCGCTTCGTCGTCGTCATCCGCATCGG TTCAATTGGAGCCCATGGAAGAAAGCGTGATTGCATACATCTGTCGAGAG GTGCTTAAAGGACTGGAAGGTCTGCACGCCATTCGCCGGTTACACCGTGA TATCAAGGGAGATAACGTTCTTCTGGACATGGATGGGTCTGTGAAAGTGG CTGACTTTGGGTTCTGCGCGGAGTTATCGAAGCGATCTGGGAAGCGCAAC ACTGTGGTGGGTACGCCGTTCTGGATGGCGCCGGAGGTGATTCGCGGCTG CAATTACGATTGCAAGGTAGATATTTGGTCAACCGGTATATTGGCGTACG AATGCGCCAACGGGAAGCCACCGCATATAGACGTGTCACCGATCAGAGCG ATGTTCTTGATAGCCACTCAGGGCGCACCGGAACTGTCGGACGCACAGCA ATGGTCTCGAGAGCTACGAGACTTCATTCGCTCGTGTTGCGCAATCAAGG CGGCGGATCGTCCGTCTGCGCAGCAAGCATTGGCGCATCCGTTCATTGCG AAGGCGTGTGAGCCCGCTGATGCGGCGAGCTTCTTCAGTGAGGCTCTGGA ACAGCGAATGGTATCTCGGAGGAAGGTGATGTCAAGGGTTCTCACGAGCG AAGGCTTTCGGGAGGAATGA back to topprotein sequence of Ggra10211.t1 >Ggra10211.t1 ID=Ggra10211.t1|Name=Ggra10211.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=690bp
MLRKILAPLKETPNHPAAQISPSKMRRYTRGKENQASPPAVHVSEPYDFR LIAHVECDPNTGLYKGIDEFMTRAVIPRGRRSPDKSNPGGSPPALPLPPL RSFSEHRADQSSRESSPTSTPTQSPQRVSRPAVASPRQSPRRQKAALVSA NKPPLAVQRRSPHGSESQVSRPFRMRHEVHVCVDPQSPTGFAGLPGAWET ILMYSGILRDEAVAHPQAVFDVLQFSKTSDPTLGTRQDVRDSLSKALPPI FLEKMQTPSLTSFDDGTDDLFSRSDSYHVDIPDAESPPPRAVTSKHEPLR DRPSPPFPFANVERRTGSPSQSPSPEKDVETCVVNELDSDYMESFIGAER RQNLPDAIPEHLDASFRHDDPNKLFTRMEQIGEGSCGNVFRAVDGNGRFV ALKRVKPENERDWKLYKFEVQVMQDHHDSENLVECYDSFRCGNELWIVME YVSAGTLADLLLGRRVSAPTHGRQSASSSSSASVQLEPMEESVIAYICRE VLKGLEGLHAIRRLHRDIKGDNVLLDMDGSVKVADFGFCAELSKRSGKRN TVVGTPFWMAPEVIRGCNYDCKVDIWSTGILAYECANGKPPHIDVSPIRA MFLIATQGAPELSDAQQWSRELRDFIRSCCAIKAADRPSAQQALAHPFIA KACEPADAASFFSEALEQRMVSRRKVMSRVLTSEGFREE* back to topmRNA from alignment at tig00000016_pilon:99327..101396+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10211.t1 ID=Ggra10211.t1|Name=Ggra10211.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2070bp|location=Sequence derived from alignment at tig00000016_pilon:99327..101396+ (Gracilaria gracilis GNS1m male) ATGCTGCGCAAAATCCTCGCTCCCCTCAAGGAGACCCCCAACCACCCAGC
AGCCCAAATCTCGCCGTCCAAGATGCGCCGCTACACGCGCGGCAAGGAGA
ACCAGGCCTCCCCGCCCGCCGTTCACGTTTCGGAACCGTATGACTTTCGT
CTCATCGCCCACGTCGAATGCGACCCCAACACCGGGCTGTACAAGGGCAT
TGACGAGTTCATGACGCGCGCCGTCATTCCTCGCGGCCGACGCAGCCCAG
ACAAATCCAACCCGGGCGGCTCCCCGCCGGCTTTACCTCTCCCTCCGCTC
CGAAGCTTCTCTGAACATCGCGCAGACCAATCCAGTCGCGAGTCTTCTCC
GACTTCAACTCCCACCCAATCGCCTCAGAGAGTGTCGCGTCCTGCAGTTG
CCTCCCCTCGTCAGTCGCCCCGCCGTCAAAAGGCCGCGCTAGTATCTGCA
AACAAGCCCCCTTTGGCCGTTCAGCGGCGGTCACCGCACGGCTCAGAAAG
TCAAGTGTCACGTCCGTTCCGAATGCGTCATGAGGTTCACGTCTGCGTTG
ATCCGCAAAGTCCCACCGGATTTGCAGGATTGCCCGGAGCTTGGGAAACA
ATTCTCATGTACTCCGGAATATTGCGAGACGAGGCCGTCGCACACCCGCA
GGCTGTGTTTGACGTGCTTCAATTCTCCAAGACATCTGACCCCACGCTAG
GAACCAGACAGGATGTGCGCGATTCGCTGTCCAAGGCTCTTCCACCAATC
TTCTTGGAAAAGATGCAAACACCCAGTCTTACTTCGTTCGATGACGGCAC
CGACGACCTTTTCAGTCGCTCGGACAGCTACCACGTGGACATTCCCGACG
CTGAATCGCCGCCCCCACGGGCAGTCACTTCGAAGCATGAGCCGCTACGC
GATAGACCATCGCCCCCCTTCCCGTTTGCAAACGTTGAGAGGCGTACAGG
GTCACCGTCTCAGTCACCGTCACCAGAGAAGGACGTGGAAACCTGCGTCG
TGAATGAGCTGGATTCCGATTACATGGAGAGCTTCATCGGCGCTGAAAGG
CGGCAAAACCTGCCTGATGCGATTCCCGAACACCTTGACGCCAGCTTCCG
CCATGATGACCCCAACAAACTATTCACGCGAATGGAGCAAATTGGCGAAG
GATCTTGTGGCAATGTATTCCGCGCGGTTGATGGCAATGGCCGGTTTGTG
GCACTCAAACGCGTCAAGCCGGAGAACGAGCGTGACTGGAAGCTTTACAA
ATTCGAAGTACAAGTTATGCAGGATCACCACGATTCCGAAAACCTGGTAG
AATGCTACGATTCTTTCCGATGTGGCAACGAGCTGTGGATTGTGATGGAA
TACGTTTCGGCTGGTACTTTGGCAGATTTGCTTTTGGGCAGGCGTGTTTC
AGCTCCAACCCATGGTCGACAGAGCGCTTCGTCGTCGTCATCCGCATCGG
TTCAATTGGAGCCCATGGAAGAAAGCGTGATTGCATACATCTGTCGAGAG
GTGCTTAAAGGACTGGAAGGTCTGCACGCCATTCGCCGGTTACACCGTGA
TATCAAGGGAGATAACGTTCTTCTGGACATGGATGGGTCTGTGAAAGTGG
CTGACTTTGGGTTCTGCGCGGAGTTATCGAAGCGATCTGGGAAGCGCAAC
ACTGTGGTGGGTACGCCGTTCTGGATGGCGCCGGAGGTGATTCGCGGCTG
CAATTACGATTGCAAGGTAGATATTTGGTCAACCGGTATATTGGCGTACG
AATGCGCCAACGGGAAGCCACCGCATATAGACGTGTCACCGATCAGAGCG
ATGTTCTTGATAGCCACTCAGGGCGCACCGGAACTGTCGGACGCACAGCA
ATGGTCTCGAGAGCTACGAGACTTCATTCGCTCGTGTTGCGCAATCAAGG
CGGCGGATCGTCCGTCTGCGCAGCAAGCATTGGCGCATCCGTTCATTGCG
AAGGCGTGTGAGCCCGCTGATGCGGCGAGCTTCTTCAGTGAGGCTCTGGA
ACAGCGAATGGTATCTCGGAGGAAGGTGATGTCAAGGGTTCTCACGAGCG
AAGGCTTTCGGGAGGAATGA back to topCoding sequence (CDS) from alignment at tig00000016_pilon:99327..101396+ >Ggra10211.t1 ID=Ggra10211.t1|Name=Ggra10211.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2070bp|location=Sequence derived from alignment at tig00000016_pilon:99327..101396+ (Gracilaria gracilis GNS1m male) ATGCTGCGCAAAATCCTCGCTCCCCTCAAGGAGACCCCCAACCACCCAGC AGCCCAAATCTCGCCGTCCAAGATGCGCCGCTACACGCGCGGCAAGGAGA ACCAGGCCTCCCCGCCCGCCGTTCACGTTTCGGAACCGTATGACTTTCGT CTCATCGCCCACGTCGAATGCGACCCCAACACCGGGCTGTACAAGGGCAT TGACGAGTTCATGACGCGCGCCGTCATTCCTCGCGGCCGACGCAGCCCAG ACAAATCCAACCCGGGCGGCTCCCCGCCGGCTTTACCTCTCCCTCCGCTC CGAAGCTTCTCTGAACATCGCGCAGACCAATCCAGTCGCGAGTCTTCTCC GACTTCAACTCCCACCCAATCGCCTCAGAGAGTGTCGCGTCCTGCAGTTG CCTCCCCTCGTCAGTCGCCCCGCCGTCAAAAGGCCGCGCTAGTATCTGCA AACAAGCCCCCTTTGGCCGTTCAGCGGCGGTCACCGCACGGCTCAGAAAG TCAAGTGTCACGTCCGTTCCGAATGCGTCATGAGGTTCACGTCTGCGTTG ATCCGCAAAGTCCCACCGGATTTGCAGGATTGCCCGGAGCTTGGGAAACA ATTCTCATGTACTCCGGAATATTGCGAGACGAGGCCGTCGCACACCCGCA GGCTGTGTTTGACGTGCTTCAATTCTCCAAGACATCTGACCCCACGCTAG GAACCAGACAGGATGTGCGCGATTCGCTGTCCAAGGCTCTTCCACCAATC TTCTTGGAAAAGATGCAAACACCCAGTCTTACTTCGTTCGATGACGGCAC CGACGACCTTTTCAGTCGCTCGGACAGCTACCACGTGGACATTCCCGACG CTGAATCGCCGCCCCCACGGGCAGTCACTTCGAAGCATGAGCCGCTACGC GATAGACCATCGCCCCCCTTCCCGTTTGCAAACGTTGAGAGGCGTACAGG GTCACCGTCTCAGTCACCGTCACCAGAGAAGGACGTGGAAACCTGCGTCG TGAATGAGCTGGATTCCGATTACATGGAGAGCTTCATCGGCGCTGAAAGG CGGCAAAACCTGCCTGATGCGATTCCCGAACACCTTGACGCCAGCTTCCG CCATGATGACCCCAACAAACTATTCACGCGAATGGAGCAAATTGGCGAAG GATCTTGTGGCAATGTATTCCGCGCGGTTGATGGCAATGGCCGGTTTGTG GCACTCAAACGCGTCAAGCCGGAGAACGAGCGTGACTGGAAGCTTTACAA ATTCGAAGTACAAGTTATGCAGGATCACCACGATTCCGAAAACCTGGTAG AATGCTACGATTCTTTCCGATGTGGCAACGAGCTGTGGATTGTGATGGAA TACGTTTCGGCTGGTACTTTGGCAGATTTGCTTTTGGGCAGGCGTGTTTC AGCTCCAACCCATGGTCGACAGAGCGCTTCGTCGTCGTCATCCGCATCGG TTCAATTGGAGCCCATGGAAGAAAGCGTGATTGCATACATCTGTCGAGAG GTGCTTAAAGGACTGGAAGGTCTGCACGCCATTCGCCGGTTACACCGTGA TATCAAGGGAGATAACGTTCTTCTGGACATGGATGGGTCTGTGAAAGTGG CTGACTTTGGGTTCTGCGCGGAGTTATCGAAGCGATCTGGGAAGCGCAAC ACTGTGGTGGGTACGCCGTTCTGGATGGCGCCGGAGGTGATTCGCGGCTG CAATTACGATTGCAAGGTAGATATTTGGTCAACCGGTATATTGGCGTACG AATGCGCCAACGGGAAGCCACCGCATATAGACGTGTCACCGATCAGAGCG ATGTTCTTGATAGCCACTCAGGGCGCACCGGAACTGTCGGACGCACAGCA ATGGTCTCGAGAGCTACGAGACTTCATTCGCTCGTGTTGCGCAATCAAGG CGGCGGATCGTCCGTCTGCGCAGCAAGCATTGGCGCATCCGTTCATTGCG AAGGCGTGTGAGCCCGCTGATGCGGCGAGCTTCTTCAGTGAGGCTCTGGA ACAGCGAATGGTATCTCGGAGGAAGGTGATGTCAAGGGTTCTCACGAGCG AAGGCTTTCGGGAGGAATGA back to top
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