Ggra10183.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10183.t1
Unique NameGgra10183.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length124
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:34990..35361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10183Ggra10183Gracilaria gracilis GNS1m malegenetig00000016_pilon 34990..35361 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10183.t1.stop1Ggra10183.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 34990..34992 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10183.t1.CDS1Ggra10183.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 34990..35361 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10183.t1.exon1Ggra10183.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 34990..35361 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10183.t1.start1Ggra10183.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 35359..35361 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10183.t1Ggra10183.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 34990..35361 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10183.t1 ID=Ggra10183.t1|Name=Ggra10183.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=124bp
MSHACQTLLLLTLFATLSLTLTSATPLRTCPCREQQTQKVSVCARPLGDP
AWCAFHICAPSFECIDPAWATHTCVRSTTIGTYQCILSDTGMVVKPRPHE
DTRCKCEHLVDRVVHHVTPIVTN*
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spliced messenger RNA

>Ggra10183.t1 ID=Ggra10183.t1|Name=Ggra10183.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp|location=Sequence derived from alignment at tig00000016_pilon:34990..35361- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCACGCGTGCCAAACGTTGCTGCTGCTCACCCTGTTCGCCACGCT
GTCGCTCACCCTCACGTCCGCCACCCCGCTTCGCACCTGCCCGTGTCGCG
AGCAGCAGACGCAAAAGGTATCCGTATGCGCGCGTCCGCTGGGCGACCCC
GCCTGGTGCGCCTTTCATATCTGCGCCCCGTCCTTTGAGTGTATCGATCC
GGCGTGGGCAACCCACACCTGCGTCCGATCCACCACCATCGGCACCTATC
AATGTATTCTATCCGATACCGGCATGGTCGTGAAGCCGCGCCCGCACGAG
GATACCAGGTGCAAGTGTGAGCATCTGGTGGACCGAGTTGTACACCACGT
CACGCCTATCGTCACCAACTAG
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protein sequence of Ggra10183.t1

>Ggra10183.t1 ID=Ggra10183.t1|Name=Ggra10183.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=124bp
MSHACQTLLLLTLFATLSLTLTSATPLRTCPCREQQTQKVSVCARPLGDP
AWCAFHICAPSFECIDPAWATHTCVRSTTIGTYQCILSDTGMVVKPRPHE
DTRCKCEHLVDRVVHHVTPIVTN*
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mRNA from alignment at tig00000016_pilon:34990..35361-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10183.t1 ID=Ggra10183.t1|Name=Ggra10183.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp|location=Sequence derived from alignment at tig00000016_pilon:34990..35361- (Gracilaria gracilis GNS1m male)
ATGTCTCACGCGTGCCAAACGTTGCTGCTGCTCACCCTGTTCGCCACGCT
GTCGCTCACCCTCACGTCCGCCACCCCGCTTCGCACCTGCCCGTGTCGCG
AGCAGCAGACGCAAAAGGTATCCGTATGCGCGCGTCCGCTGGGCGACCCC
GCCTGGTGCGCCTTTCATATCTGCGCCCCGTCCTTTGAGTGTATCGATCC
GGCGTGGGCAACCCACACCTGCGTCCGATCCACCACCATCGGCACCTATC
AATGTATTCTATCCGATACCGGCATGGTCGTGAAGCCGCGCCCGCACGAG
GATACCAGGTGCAAGTGTGAGCATCTGGTGGACCGAGTTGTACACCACGT
CACGCCTATCGTCACCAACTAG
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Coding sequence (CDS) from alignment at tig00000016_pilon:34990..35361-

>Ggra10183.t1 ID=Ggra10183.t1|Name=Ggra10183.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=372bp|location=Sequence derived from alignment at tig00000016_pilon:34990..35361- (Gracilaria gracilis GNS1m male)
ATGTCTCACGCGTGCCAAACGTTGCTGCTGCTCACCCTGTTCGCCACGCT
GTCGCTCACCCTCACGTCCGCCACCCCGCTTCGCACCTGCCCGTGTCGCG
AGCAGCAGACGCAAAAGGTATCCGTATGCGCGCGTCCGCTGGGCGACCCC
GCCTGGTGCGCCTTTCATATCTGCGCCCCGTCCTTTGAGTGTATCGATCC
GGCGTGGGCAACCCACACCTGCGTCCGATCCACCACCATCGGCACCTATC
AATGTATTCTATCCGATACCGGCATGGTCGTGAAGCCGCGCCCGCACGAG
GATACCAGGTGCAAGTGTGAGCATCTGGTGGACCGAGTTGTACACCACGT
CACGCCTATCGTCACCAACTAG
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