Ggra10132.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10132.t1
Unique NameGgra10132.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length209
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000113_piloncontigtig00000113_pilon:392093..392719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10132Ggra10132Gracilaria gracilis GNS1m malegenetig00000113_pilon 392093..392719 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10132.t1.stop1Ggra10132.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000113_pilon 392093..392095 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10132.t1.CDS1Ggra10132.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000113_pilon 392093..392719 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10132.t1.exon1Ggra10132.t1.exon1Gracilaria gracilis GNS1m maleexontig00000113_pilon 392093..392719 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10132.t1.start1Ggra10132.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000113_pilon 392717..392719 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10132.t1Ggra10132.t1Gracilaria gracilis GNS1m malepolypeptidetig00000113_pilon 392093..392719 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10132.t1 ID=Ggra10132.t1|Name=Ggra10132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=209bp
MDGDFKVKASIIYLDSLGLDSPHIDLYDNMHFYLTACLPNVNINTDYIRS
VLIRKYCGVHVQRDLECGFYASFNASFVSKNLALFRNGGTKQIIRDLKTF
YATYPFCEYHLLLQNRLRALTAAYTRNLKMVIRCAANVEDVGDTHGQRQA
ENQKDCNAETASNGENASSSGVTDNKTRTGFLHIAQERERLVGDVSDQHL
IRQWEECV*
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spliced messenger RNA

>Ggra10132.t1 ID=Ggra10132.t1|Name=Ggra10132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=627bp|location=Sequence derived from alignment at tig00000113_pilon:392093..392719- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATGGCGATTTCAAGGTTAAAGCATCAATTATATATCTTGACAGCTT
GGGTCTGGACAGCCCGCACATTGACTTGTACGACAACATGCACTTTTACC
TCACTGCCTGCTTGCCAAATGTGAACATCAATACGGACTACATTAGATCC
GTTTTAATCCGAAAGTATTGCGGTGTTCATGTCCAGAGAGACCTTGAGTG
TGGCTTTTACGCTAGCTTCAACGCATCATTTGTCTCCAAGAACCTCGCAC
TATTTCGCAACGGTGGTACAAAACAAATCATCCGTGATCTTAAGACATTC
TACGCAACCTATCCGTTTTGCGAGTATCATCTGCTCCTGCAAAATCGTTT
ACGTGCACTAACCGCAGCATATACTCGTAATCTCAAGATGGTCATTCGAT
GTGCAGCGAACGTTGAAGATGTCGGCGACACACACGGACAACGACAGGCA
GAGAATCAGAAGGACTGTAACGCCGAAACCGCATCAAACGGAGAGAACGC
GTCTAGCTCTGGAGTTACTGACAACAAGACCCGCACTGGCTTTCTACACA
TCGCTCAAGAAAGAGAAAGACTGGTCGGGGACGTCTCGGACCAACACTTG
ATAAGGCAGTGGGAAGAGTGTGTATGA
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protein sequence of Ggra10132.t1

>Ggra10132.t1 ID=Ggra10132.t1|Name=Ggra10132.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=209bp
MDGDFKVKASIIYLDSLGLDSPHIDLYDNMHFYLTACLPNVNINTDYIRS
VLIRKYCGVHVQRDLECGFYASFNASFVSKNLALFRNGGTKQIIRDLKTF
YATYPFCEYHLLLQNRLRALTAAYTRNLKMVIRCAANVEDVGDTHGQRQA
ENQKDCNAETASNGENASSSGVTDNKTRTGFLHIAQERERLVGDVSDQHL
IRQWEECV*
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mRNA from alignment at tig00000113_pilon:392093..392719-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10132.t1 ID=Ggra10132.t1|Name=Ggra10132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=627bp|location=Sequence derived from alignment at tig00000113_pilon:392093..392719- (Gracilaria gracilis GNS1m male)
ATGGATGGCGATTTCAAGGTTAAAGCATCAATTATATATCTTGACAGCTT
GGGTCTGGACAGCCCGCACATTGACTTGTACGACAACATGCACTTTTACC
TCACTGCCTGCTTGCCAAATGTGAACATCAATACGGACTACATTAGATCC
GTTTTAATCCGAAAGTATTGCGGTGTTCATGTCCAGAGAGACCTTGAGTG
TGGCTTTTACGCTAGCTTCAACGCATCATTTGTCTCCAAGAACCTCGCAC
TATTTCGCAACGGTGGTACAAAACAAATCATCCGTGATCTTAAGACATTC
TACGCAACCTATCCGTTTTGCGAGTATCATCTGCTCCTGCAAAATCGTTT
ACGTGCACTAACCGCAGCATATACTCGTAATCTCAAGATGGTCATTCGAT
GTGCAGCGAACGTTGAAGATGTCGGCGACACACACGGACAACGACAGGCA
GAGAATCAGAAGGACTGTAACGCCGAAACCGCATCAAACGGAGAGAACGC
GTCTAGCTCTGGAGTTACTGACAACAAGACCCGCACTGGCTTTCTACACA
TCGCTCAAGAAAGAGAAAGACTGGTCGGGGACGTCTCGGACCAACACTTG
ATAAGGCAGTGGGAAGAGTGTGTATGA
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Coding sequence (CDS) from alignment at tig00000113_pilon:392093..392719-

>Ggra10132.t1 ID=Ggra10132.t1|Name=Ggra10132.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=627bp|location=Sequence derived from alignment at tig00000113_pilon:392093..392719- (Gracilaria gracilis GNS1m male)
ATGGATGGCGATTTCAAGGTTAAAGCATCAATTATATATCTTGACAGCTT
GGGTCTGGACAGCCCGCACATTGACTTGTACGACAACATGCACTTTTACC
TCACTGCCTGCTTGCCAAATGTGAACATCAATACGGACTACATTAGATCC
GTTTTAATCCGAAAGTATTGCGGTGTTCATGTCCAGAGAGACCTTGAGTG
TGGCTTTTACGCTAGCTTCAACGCATCATTTGTCTCCAAGAACCTCGCAC
TATTTCGCAACGGTGGTACAAAACAAATCATCCGTGATCTTAAGACATTC
TACGCAACCTATCCGTTTTGCGAGTATCATCTGCTCCTGCAAAATCGTTT
ACGTGCACTAACCGCAGCATATACTCGTAATCTCAAGATGGTCATTCGAT
GTGCAGCGAACGTTGAAGATGTCGGCGACACACACGGACAACGACAGGCA
GAGAATCAGAAGGACTGTAACGCCGAAACCGCATCAAACGGAGAGAACGC
GTCTAGCTCTGGAGTTACTGACAACAAGACCCGCACTGGCTTTCTACACA
TCGCTCAAGAAAGAGAAAGACTGGTCGGGGACGTCTCGGACCAACACTTG
ATAAGGCAGTGGGAAGAGTGTGTATGA
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