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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10126.t1.start1 | Ggra10126.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000113_pilon 259800..259802 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10126.t1.intron1 | Ggra10126.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000113_pilon 261653..264893 + |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra10126.t1.stop1 | Ggra10126.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000113_pilon 264988..264990 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10126.t1 ID=Ggra10126.t1|Name=Ggra10126.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=650bp MHRDHPTVYFGDSLRWKCSRIVLDFFKEAFEVIVLGGNRSAEVSKRNYML DIRGYKRQEDAFSCGCYVIAIAIEFAPDRGFAPRKTFKSGYNRELSENYR WMAIRSRVLPILLASQFFKKEKVTETMVSRYRVHHREDYSRIRAQGQNRL KTLRHPILKRSDFKLEKKKGIQNALSARDTRSVDVDCGSKTSVPRLSEET MLMCILDSITAGFDAIEERRSGNCGAVPAPQSSLGNDEDVLGNNQTTPRL SLSTARRMRVERLNANLSPMPTRSSERKVRFLDSSTAVKELLDNILADVS QHMESKEKQSGENLMNMSSFELLQPIPDREGAHLEGEMFDFIALMASIAR AKRFLYGIHHFRYVKLRKKGNGRLINGRFRYQRDSKFSSSCPSNIMVSLS SMNSNWTVRVNMNHTHAPAQVSDSDIQKRYQSLRRTMQSRFRTWEGKEQG KDKSYWNYLYQKCFPDPSASAIYVRKSTGEDMFLFPGGVSVQENVLHPSS RSIHDTHPVSILPVPTQSNMVQPLEHSVGILRSPPTQGVHQLESQVVPTV GSTNWKSDGEKDMKEKYMKAEVGVGSRRIDDMTHFSVADVSDLRLKSSDD VTHVDPEIGDNSLITQPEHFMKTWLTIEQHVVPILDVADDFEAHLYSDH* back to topspliced messenger RNA >Ggra10126.t1 ID=Ggra10126.t1|Name=Ggra10126.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1950bp|location=Sequence derived from alignment at tig00000113_pilon:259800..264990+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCACAGAGACCACCCCACAGTGTACTTTGGGGATAGTTTAAGGTGGAA ATGCTCAAGGATTGTTTTGGATTTCTTTAAGGAGGCTTTCGAGGTTATTG TCCTCGGTGGAAATCGTTCGGCTGAAGTCTCGAAAAGAAACTATATGCTT GATATTCGAGGATACAAACGGCAGGAAGATGCGTTTAGCTGTGGCTGTTA CGTTATCGCAATTGCTATCGAATTCGCGCCGGACAGGGGTTTTGCTCCAA GAAAGACTTTTAAGTCTGGATACAATCGGGAGCTCTCCGAAAACTACCGC TGGATGGCCATTCGGAGCCGTGTTTTGCCGATCCTATTGGCTTCCCAATT CTTTAAGAAGGAGAAAGTCACAGAAACTATGGTTTCTAGGTACAGGGTGC ATCATCGAGAGGACTACTCACGAATTCGTGCACAGGGGCAGAATCGCTTA AAAACTCTCAGACATCCCATTCTAAAGCGTTCAGATTTCAAGTTAGAGAA GAAAAAGGGCATCCAGAACGCTTTATCTGCACGAGATACTAGATCAGTGG ATGTTGATTGTGGGAGCAAAACATCTGTACCGCGGTTGAGTGAGGAGACG ATGCTGATGTGTATTCTGGACAGCATTACAGCTGGATTTGACGCTATCGA AGAGAGAAGGTCAGGAAATTGTGGTGCGGTACCTGCGCCACAGAGCAGTT TGGGCAATGATGAGGATGTTCTGGGCAATAACCAGACCACTCCGCGGCTA TCACTCAGTACAGCTCGTAGGATGAGGGTAGAAAGATTGAATGCCAATTT GTCACCCATGCCGACTCGTAGCTCCGAACGCAAGGTTCGATTCTTAGACA GCTCCACGGCTGTAAAAGAACTACTGGATAACATCTTAGCGGATGTATCA CAACATATGGAATCCAAGGAAAAACAATCGGGAGAGAATCTCATGAATAT GAGTAGTTTTGAGCTTCTCCAGCCGATTCCCGACCGTGAGGGAGCCCATC TCGAGGGAGAGATGTTCGATTTCATAGCTCTCATGGCATCTATTGCCCGC GCAAAGAGATTCCTGTACGGAATTCATCACTTTAGGTATGTGAAACTGAG AAAGAAGGGCAATGGACGTCTTATTAATGGTCGGTTCAGGTACCAGAGAG ACAGCAAGTTCTCCAGCTCATGCCCATCGAATATTATGGTGTCTTTGTCG AGCATGAACTCCAACTGGACGGTCCGTGTTAATATGAATCACACCCACGC CCCTGCTCAGGTTTCTGACTCGGACATTCAGAAGCGCTACCAGTCTCTCC GAAGGACAATGCAAAGTCGTTTTCGGACGTGGGAGGGTAAGGAGCAGGGA AAGGATAAAAGTTATTGGAACTACCTGTACCAAAAGTGCTTCCCTGATCC CTCTGCATCGGCGATATATGTTAGAAAGAGTACAGGGGAAGATATGTTTC TTTTTCCTGGCGGAGTATCTGTGCAAGAAAATGTACTACATCCTTCCTCT CGTTCTATACATGACACTCACCCCGTGTCTATACTGCCAGTACCTACACA AAGCAATATGGTACAGCCCTTGGAACATTCAGTCGGGATACTACGCTCTC CACCGACACAAGGGGTTCATCAACTGGAGTCGCAGGTTGTCCCTACTGTG GGCAGTACAAACTGGAAAAGTGACGGGGAGAAGGACATGAAAGAGAAGTA CATGAAGGCGGAAGTGGGTGTGGGCTCACGTCGCATAGATGATATGACTC ATTTCTCAGTGGCCGACGTCAGCGACTTGAGATTGAAAAGCAGTGACGAC GTCACGCACGTCGATCCTGAGATCGGTGACAACTCTTTAATTACACAACC AGAACATTTTATGAAGACTTGGCTAACGATTGAACAACACGTAGTCCCCA TCCTTGATGTGGCGGATGACTTTGAAGCCCACCTCTACTCGGACCATTGA back to topprotein sequence of Ggra10126.t1 >Ggra10126.t1 ID=Ggra10126.t1|Name=Ggra10126.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=650bp
MHRDHPTVYFGDSLRWKCSRIVLDFFKEAFEVIVLGGNRSAEVSKRNYML DIRGYKRQEDAFSCGCYVIAIAIEFAPDRGFAPRKTFKSGYNRELSENYR WMAIRSRVLPILLASQFFKKEKVTETMVSRYRVHHREDYSRIRAQGQNRL KTLRHPILKRSDFKLEKKKGIQNALSARDTRSVDVDCGSKTSVPRLSEET MLMCILDSITAGFDAIEERRSGNCGAVPAPQSSLGNDEDVLGNNQTTPRL SLSTARRMRVERLNANLSPMPTRSSERKVRFLDSSTAVKELLDNILADVS QHMESKEKQSGENLMNMSSFELLQPIPDREGAHLEGEMFDFIALMASIAR AKRFLYGIHHFRYVKLRKKGNGRLINGRFRYQRDSKFSSSCPSNIMVSLS SMNSNWTVRVNMNHTHAPAQVSDSDIQKRYQSLRRTMQSRFRTWEGKEQG KDKSYWNYLYQKCFPDPSASAIYVRKSTGEDMFLFPGGVSVQENVLHPSS RSIHDTHPVSILPVPTQSNMVQPLEHSVGILRSPPTQGVHQLESQVVPTV GSTNWKSDGEKDMKEKYMKAEVGVGSRRIDDMTHFSVADVSDLRLKSSDD VTHVDPEIGDNSLITQPEHFMKTWLTIEQHVVPILDVADDFEAHLYSDH* back to topmRNA from alignment at tig00000113_pilon:259800..264990+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10126.t1 ID=Ggra10126.t1|Name=Ggra10126.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5191bp|location=Sequence derived from alignment at tig00000113_pilon:259800..264990+ (Gracilaria gracilis GNS1m male) ATGCACAGAGACCACCCCACAGTGTACTTTGGGGATAGTTTAAGGTGGAA
ATGCTCAAGGATTGTTTTGGATTTCTTTAAGGAGGCTTTCGAGGTTATTG
TCCTCGGTGGAAATCGTTCGGCTGAAGTCTCGAAAAGAAACTATATGCTT
GATATTCGAGGATACAAACGGCAGGAAGATGCGTTTAGCTGTGGCTGTTA
CGTTATCGCAATTGCTATCGAATTCGCGCCGGACAGGGGTTTTGCTCCAA
GAAAGACTTTTAAGTCTGGATACAATCGGGAGCTCTCCGAAAACTACCGC
TGGATGGCCATTCGGAGCCGTGTTTTGCCGATCCTATTGGCTTCCCAATT
CTTTAAGAAGGAGAAAGTCACAGAAACTATGGTTTCTAGGTACAGGGTGC
ATCATCGAGAGGACTACTCACGAATTCGTGCACAGGGGCAGAATCGCTTA
AAAACTCTCAGACATCCCATTCTAAAGCGTTCAGATTTCAAGTTAGAGAA
GAAAAAGGGCATCCAGAACGCTTTATCTGCACGAGATACTAGATCAGTGG
ATGTTGATTGTGGGAGCAAAACATCTGTACCGCGGTTGAGTGAGGAGACG
ATGCTGATGTGTATTCTGGACAGCATTACAGCTGGATTTGACGCTATCGA
AGAGAGAAGGTCAGGAAATTGTGGTGCGGTACCTGCGCCACAGAGCAGTT
TGGGCAATGATGAGGATGTTCTGGGCAATAACCAGACCACTCCGCGGCTA
TCACTCAGTACAGCTCGTAGGATGAGGGTAGAAAGATTGAATGCCAATTT
GTCACCCATGCCGACTCGTAGCTCCGAACGCAAGGTTCGATTCTTAGACA
GCTCCACGGCTGTAAAAGAACTACTGGATAACATCTTAGCGGATGTATCA
CAACATATGGAATCCAAGGAAAAACAATCGGGAGAGAATCTCATGAATAT
GAGTAGTTTTGAGCTTCTCCAGCCGATTCCCGACCGTGAGGGAGCCCATC
TCGAGGGAGAGATGTTCGATTTCATAGCTCTCATGGCATCTATTGCCCGC
GCAAAGAGATTCCTGTACGGAATTCATCACTTTAGGTATGTGAAACTGAG
AAAGAAGGGCAATGGACGTCTTATTAATGGTCGGTTCAGGTACCAGAGAG
ACAGCAAGTTCTCCAGCTCATGCCCATCGAATATTATGGTGTCTTTGTCG
AGCATGAACTCCAACTGGACGGTCCGTGTTAATATGAATCACACCCACGC
CCCTGCTCAGGTTTCTGACTCGGACATTCAGAAGCGCTACCAGTCTCTCC
GAAGGACAATGCAAAGTCGTTTTCGGACGTGGGAGGGTAAGGAGCAGGGA
AAGGATAAAAGTTATTGGAACTACCTGTACCAAAAGTGCTTCCCTGATCC
CTCTGCATCGGCGATATATGTTAGAAAGAGTACAGGGGAAGATATGTTTC
TTTTTCCTGGCGGAGTATCTGTGCAAGAAAATGTACTACATCCTTCCTCT
CGTTCTATACATGACACTCACCCCGTGTCTATACTGCCAGTACCTACACA
AAGCAATATGGTACAGCCCTTGGAACATTCAGTCGGGATACTACGCTCTC
CACCGACACAAGGGGTTCATCAACTGGAGTCGCAGGTTGTCCCTACTGTG
GGCAGTACAAACTGGAAAAGTGACGGGGAGAAGGACATGAAAGAGAAGTA
CATGAAGGCGGAAGTGGGTGTGGGCTCACGTCGCATAGATGATATGACTC
ATTTCTCAGTGGCCGACGTCAGCGACTTGAGATTGAAAAGCAGTGACGAC
GTCACGCACGTCGATCCTGAGATCGGTGACAACTCTTTAATTACACAACC
AGAGTCCCAGGAGGGCAAAGAGAATGTGGAGAGAGCTGAGGGACGATCGC
TACAGTTCAGTTCTGCAGAGCTACAACACGTTGACTGTGCCCTATCGGAG
GGAGAAGCAGAGTTCAAAAAATGGAACGAGAAGGacacagagatggaaga
cgttggggcttctgaactaatcgaacgctttttatttcttgacgatagtg
aagaagtttccactaagcttgttcatgtcttgagcgccgaggagccgcca
gaggctgtcatacattcatcttcggaattgagtgaggagcgtaggactgc
aggcagtgaagaagatcggtctgatgatggaattgagtcaagtccagata
tggacgagttctttaaagcagctgttattgcctacttctggagcttgcct
ctcaatgctcccagtcgagacgtggtcagggaagttcgctttatagctga
gagtatgggctacaatgtacgctgtaggacttccatatttcttggaagca
aggaggcacagcggaacgttggggaagtgggggacaagcttgtgcttcaa
aagtgcatattgaagtgcaagaagcaggacgaaaaggatatatgcgggtt
ctctttaacaatcaagacactaacgccggagaaggaagaagaagggagat
catatgtcggcgatttccgggaagcgagccacaatcatccccccatgtcc
agcagagccggaatcaggcacctcccaccgaagctgcgtagagaggctat
gcatatgacaaacgatttgcatatgtctctcccagatactatacgctatc
tggaagacaaacatagcattgtgataaacccgaagtctgtgcggcaggtg
ttgggatacggacgttctattagccatccgaaggacttggaatgcaccaa
gctgttcaaagaactggtttcgttaaaagagcaagatgcggggaacaggt
actacataagtcatgacgtggagggtcgaatgacttcagttcgatgggcc
ttcgcagaatggattgaggactacaaagcgtttggtgttgtgcccggtgt
gcctatcgattgcaaggcagtcgcgaaccgctatggattaccgcttataa
caatcaatggaagggcgaacgatggctttacgttaatgttcttcatgggg
tttatcagcggcgagacggaagccgactttgtagaggtcctaacacaatt
taagtccatgattccaatatcctcagctctaatatctatggatcagagct
ctgcctgtattgcagccatggagcaggtcttcgagcattcgtttattatc
ctggacgaatggcacctcaatcagaatcaaatgaagaacgtcacagcttg
gtgctcccacattggaaaagtcagttggtgcgacgacatgtctagggagt
tgttcaacttacgccggtcgaatacgctcccagtattcgtagaacgccga
gataacttcattcagaagtacttcgcgggtttaacagaaaagcttccagt
gtggttcacatacctatatgtgcacaggcctcaattgctaattgcttgct
tgagaatcgctgccgttccaaaacggtatctgttttaggggacgggatat
acagaagcgtcgaattctggttatcgtgcttacatcttggcgaaaaaagt
ccccttcagcgagataccgagacaaatgaagctccttacccaaaagcgac
gagaggcccgcaatgaatcgcgcatacgggcattgtcgccaatgagctcc
cggtataggtcgattcgcaactctcgattgcctattcctccgggaatcct
ggacgggcttatatccgattataccagttacgcgttgacaaagttccagg
aaattggcgtgatgcctgcagagaactttgccgttttaagagcatatgtt
gctgaaccggagcaggtgtattgggccgagctcgcggtcgaagaaaggga
gcgaattggactcgtagcatgttttgagctcacatggagcttccaactac
tccgaaaacttgaagttctacgcccgaaaccaccagcagcgccattgcga
gtgctttttgcgcggaaggaaatagaaaatgatgaagatgcagagagcga
gctcctcgtgagatgtgactgcaaaaagaccgagtcaatgggctttcctt
gtcggcacatcgtgcggtgtgctattgtgtacaacgagtacgtcttgagc
acacttcgtctgaaagaagtgctagacgagtatatcgagctggaatcttt
ctttgacccctactggaaaaatagccctggaaccatttcatttagcgaag
tgtgtagacgtagaagtgtttgtggtgtcttggatatggattctctgaca
actcgactcgaatcctcccacgaaaatatagaagcgagtgctattgaaac
atttctgaagagagagtcacaaaatgaagtccgaaagcttgtgaaatggt
cggataataaagccatattcgaccaactacacaaacttgccgacggtatt
ggaccatcggctgttgatagactcggtgatcttctcagggaggcacacag
gagattgatcaagggcgaaattgctacagcaagtgtactggagcaggtga
gtattgccggacaatcggagaaggagggaggaaagagagtgcaatggtcg
gattccacggtcgtggaatctataccggtgcttaaagcaccaaatgtgtc
aaaggtgaagttcaagaagaggaaaaagagctttaccgaaaagttcaaca
gcaagaaaggaaggacggagaatcaacagaaggcgagagaaaaaaccagg
cttctcaaggaaccagttgagcggttatcacaagattctgCGAGAACGTC
TGAGAGAAGCCAGCCGCAAGACGACTTGTAATAGTAGTACATTGAAATGT
TAGATGACTTCGGATACATCAGTTACGTCGAATACAACTGTTGTGGTGTA
TAGAACATAAAAAGTACATTGTGACTCGTATTTTCTTTTATTAACGAACA
TAGAACATAGAGCTTTTGTTGGGAAGAAGGGAGCATATTCCCATAGCCGG
CTTACTACCCTGATGAAACAGGCCGCAGTGTGGAACAAGCATGAGCTCCT
GAACCTCAGCACGGGTCTGGTGAGATTGCGGAACGTGCAAATTCATTTCG
TCCCCATCGAAATCGGCATTGTATGGAGATGTTACTGAAAGGTTCAGGCG
AAAAGTCGAGTACCGCATAACGCGTATCCTGTGCCCCATAATAGACATTT
TATGAAGACTTGGCTAACGATTGAACAACACGTAGTCCCCATCCTTGATG
TGGCGGATGACTTTGAAGCCCACCTCTACTCGGACCATTGA back to topCoding sequence (CDS) from alignment at tig00000113_pilon:259800..264990+ >Ggra10126.t1 ID=Ggra10126.t1|Name=Ggra10126.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1950bp|location=Sequence derived from alignment at tig00000113_pilon:259800..264990+ (Gracilaria gracilis GNS1m male) ATGCACAGAGACCACCCCACAGTGTACTTTGGGGATAGTTTAAGGTGGAA ATGCTCAAGGATTGTTTTGGATTTCTTTAAGGAGGCTTTCGAGGTTATTG TCCTCGGTGGAAATCGTTCGGCTGAAGTCTCGAAAAGAAACTATATGCTT GATATTCGAGGATACAAACGGCAGGAAGATGCGTTTAGCTGTGGCTGTTA CGTTATCGCAATTGCTATCGAATTCGCGCCGGACAGGGGTTTTGCTCCAA GAAAGACTTTTAAGTCTGGATACAATCGGGAGCTCTCCGAAAACTACCGC TGGATGGCCATTCGGAGCCGTGTTTTGCCGATCCTATTGGCTTCCCAATT CTTTAAGAAGGAGAAAGTCACAGAAACTATGGTTTCTAGGTACAGGGTGC ATCATCGAGAGGACTACTCACGAATTCGTGCACAGGGGCAGAATCGCTTA AAAACTCTCAGACATCCCATTCTAAAGCGTTCAGATTTCAAGTTAGAGAA GAAAAAGGGCATCCAGAACGCTTTATCTGCACGAGATACTAGATCAGTGG ATGTTGATTGTGGGAGCAAAACATCTGTACCGCGGTTGAGTGAGGAGACG ATGCTGATGTGTATTCTGGACAGCATTACAGCTGGATTTGACGCTATCGA AGAGAGAAGGTCAGGAAATTGTGGTGCGGTACCTGCGCCACAGAGCAGTT TGGGCAATGATGAGGATGTTCTGGGCAATAACCAGACCACTCCGCGGCTA TCACTCAGTACAGCTCGTAGGATGAGGGTAGAAAGATTGAATGCCAATTT GTCACCCATGCCGACTCGTAGCTCCGAACGCAAGGTTCGATTCTTAGACA GCTCCACGGCTGTAAAAGAACTACTGGATAACATCTTAGCGGATGTATCA CAACATATGGAATCCAAGGAAAAACAATCGGGAGAGAATCTCATGAATAT GAGTAGTTTTGAGCTTCTCCAGCCGATTCCCGACCGTGAGGGAGCCCATC TCGAGGGAGAGATGTTCGATTTCATAGCTCTCATGGCATCTATTGCCCGC GCAAAGAGATTCCTGTACGGAATTCATCACTTTAGGTATGTGAAACTGAG AAAGAAGGGCAATGGACGTCTTATTAATGGTCGGTTCAGGTACCAGAGAG ACAGCAAGTTCTCCAGCTCATGCCCATCGAATATTATGGTGTCTTTGTCG AGCATGAACTCCAACTGGACGGTCCGTGTTAATATGAATCACACCCACGC CCCTGCTCAGGTTTCTGACTCGGACATTCAGAAGCGCTACCAGTCTCTCC GAAGGACAATGCAAAGTCGTTTTCGGACGTGGGAGGGTAAGGAGCAGGGA AAGGATAAAAGTTATTGGAACTACCTGTACCAAAAGTGCTTCCCTGATCC CTCTGCATCGGCGATATATGTTAGAAAGAGTACAGGGGAAGATATGTTTC TTTTTCCTGGCGGAGTATCTGTGCAAGAAAATGTACTACATCCTTCCTCT CGTTCTATACATGACACTCACCCCGTGTCTATACTGCCAGTACCTACACA AAGCAATATGGTACAGCCCTTGGAACATTCAGTCGGGATACTACGCTCTC CACCGACACAAGGGGTTCATCAACTGGAGTCGCAGGTTGTCCCTACTGTG GGCAGTACAAACTGGAAAAGTGACGGGGAGAAGGACATGAAAGAGAAGTA CATGAAGGCGGAAGTGGGTGTGGGCTCACGTCGCATAGATGATATGACTC ATTTCTCAGTGGCCGACGTCAGCGACTTGAGATTGAAAAGCAGTGACGAC GTCACGCACGTCGATCCTGAGATCGGTGACAACTCTTTAATTACACAACC AGAACATTTTATGAAGACTTGGCTAACGATTGAACAACACGTAGTCCCCA TCCTTGATGTGGCGGATGACTTTGAAGCCCACCTCTACTCGGACCATTGA back to top
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