Ggra10040.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10040.t1
Unique NameGgra10040.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length8
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000878_piloncontigtig00000878_pilon:113..235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10040Ggra10040Gracilaria gracilis GNS1m malegenetig00000878_pilon 113..235 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10040.t1Ggra10040.t1Gracilaria gracilis GNS1m malepolypeptidetig00000878_pilon 113..235 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10040.t1.CDS1Ggra10040.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000878_pilon 113..128 -
Ggra10040.t1.CDS2Ggra10040.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000878_pilon 228..235 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10040.t1.exon1Ggra10040.t1.exon1Gracilaria gracilis GNS1m maleexontig00000878_pilon 113..128 -
Ggra10040.t1.exon2Ggra10040.t1.exon2Gracilaria gracilis GNS1m maleexontig00000878_pilon 228..235 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10040.t1.intron1Ggra10040.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000878_pilon 129..227 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10040.t1.start1Ggra10040.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000878_pilon 233..235 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10040.t1 ID=Ggra10040.t1|Name=Ggra10040.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=8bp
MDWTCWYW
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spliced messenger RNA

>Ggra10040.t1 ID=Ggra10040.t1|Name=Ggra10040.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=24bp|location=Sequence derived from alignment at tig00000878_pilon:113..235- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGGACCTGCTGGTACTGG
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protein sequence of Ggra10040.t1

>Ggra10040.t1 ID=Ggra10040.t1|Name=Ggra10040.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=8bp
MDWTCWYW
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mRNA from alignment at tig00000878_pilon:113..235-

Legend: polypeptideCDSexonstart_codonintron
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10040.t1 ID=Ggra10040.t1|Name=Ggra10040.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=123bp|location=Sequence derived from alignment at tig00000878_pilon:113..235- (Gracilaria gracilis GNS1m male)
ATGGACTGGTACGTATGTCACCAGATCCTAATAGAAATGGAAGAGATGCG
TTCCCCTCACTTCACTCTAATAACAAGGCCTTCCACGTTGGCCATCTTGT
GTTGCAGGACCTGCTGGTACTGG
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Coding sequence (CDS) from alignment at tig00000878_pilon:113..235-

>Ggra10040.t1 ID=Ggra10040.t1|Name=Ggra10040.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=24bp|location=Sequence derived from alignment at tig00000878_pilon:113..235- (Gracilaria gracilis GNS1m male)
ATGGACTGGACCTGCTGGTACTGG
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