Ggra1003.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1003.t1
Unique NameGgra1003.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length164
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:127921..128412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1003Ggra1003Gracilaria gracilis GNS1m malegenetig00000027_pilon 127921..128412 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1003.t1.stop1Ggra1003.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000027_pilon 127921..127923 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1003.t1.CDS1Ggra1003.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000027_pilon 127921..128412 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1003.t1.exon1Ggra1003.t1.exon1Gracilaria gracilis GNS1m maleexontig00000027_pilon 127921..128412 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1003.t1.start1Ggra1003.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000027_pilon 128410..128412 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1003.t1Ggra1003.t1Gracilaria gracilis GNS1m malepolypeptidetig00000027_pilon 127921..128412 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1003.t1 ID=Ggra1003.t1|Name=Ggra1003.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=164bp
MNVRFFISLALLGLLFNFSLSAVVPSSADTLRLTSQAKSVQNVPQILEES
GPKVVVRESNDEDKVEDSDDGLDDDEENDKDGVALHDVVVDEDSNDDVPD
DADDNNDTDDTDDTNGADDDGDDDDDDGDDADDDDADDADDADDVDEVDD
DDDDVDDEGNEGR*
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spliced messenger RNA

>Ggra1003.t1 ID=Ggra1003.t1|Name=Ggra1003.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=492bp|location=Sequence derived from alignment at tig00000027_pilon:127921..128412- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGTTAGGTTCTTCATTTCTCTTGCTCTGCTTGGTCTCCTATTCAA
CTTCTCACTCTCCGCCGTGGTTCCGAGCTCTGCCGACACTTTAAGGCTTA
CTTCACAGGCAAAATCCGTTCAGAACGTACCACAGATATTAGAAGAATCT
GGCCCCAAGGTGGTAGTACGTGAGAGTAATGATGAAGACAAGGTTGAAGA
CAGTGATGACGGTTTGGACGATGACGAAGAGAACGACAAAGACGGTGTAG
CTCTACATGATGTTGTAGTTGACGAAGATAGCAATGATGACGTTCCCGAT
GATGCTGATGACAACAACGACACCGACGACACCGACGACACCAACGGCGC
CGACGACGACGGCGACGACGACGACGACGACGGCGACGACGCTGACGATG
ACGACGCGGATGACGCCGACGACGCGGATGACGTCGATGAAGTCGATGAC
GACGACGATGATGTTGATGATGAAGGTAATGAAGGTCGTTGA
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protein sequence of Ggra1003.t1

>Ggra1003.t1 ID=Ggra1003.t1|Name=Ggra1003.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=164bp
MNVRFFISLALLGLLFNFSLSAVVPSSADTLRLTSQAKSVQNVPQILEES
GPKVVVRESNDEDKVEDSDDGLDDDEENDKDGVALHDVVVDEDSNDDVPD
DADDNNDTDDTDDTNGADDDGDDDDDDGDDADDDDADDADDADDVDEVDD
DDDDVDDEGNEGR*
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mRNA from alignment at tig00000027_pilon:127921..128412-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1003.t1 ID=Ggra1003.t1|Name=Ggra1003.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=492bp|location=Sequence derived from alignment at tig00000027_pilon:127921..128412- (Gracilaria gracilis GNS1m male)
ATGAACGTTAGGTTCTTCATTTCTCTTGCTCTGCTTGGTCTCCTATTCAA
CTTCTCACTCTCCGCCGTGGTTCCGAGCTCTGCCGACACTTTAAGGCTTA
CTTCACAGGCAAAATCCGTTCAGAACGTACCACAGATATTAGAAGAATCT
GGCCCCAAGGTGGTAGTACGTGAGAGTAATGATGAAGACAAGGTTGAAGA
CAGTGATGACGGTTTGGACGATGACGAAGAGAACGACAAAGACGGTGTAG
CTCTACATGATGTTGTAGTTGACGAAGATAGCAATGATGACGTTCCCGAT
GATGCTGATGACAACAACGACACCGACGACACCGACGACACCAACGGCGC
CGACGACGACGGCGACGACGACGACGACGACGGCGACGACGCTGACGATG
ACGACGCGGATGACGCCGACGACGCGGATGACGTCGATGAAGTCGATGAC
GACGACGATGATGTTGATGATGAAGGTAATGAAGGTCGTTGA
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Coding sequence (CDS) from alignment at tig00000027_pilon:127921..128412-

>Ggra1003.t1 ID=Ggra1003.t1|Name=Ggra1003.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=492bp|location=Sequence derived from alignment at tig00000027_pilon:127921..128412- (Gracilaria gracilis GNS1m male)
ATGAACGTTAGGTTCTTCATTTCTCTTGCTCTGCTTGGTCTCCTATTCAA
CTTCTCACTCTCCGCCGTGGTTCCGAGCTCTGCCGACACTTTAAGGCTTA
CTTCACAGGCAAAATCCGTTCAGAACGTACCACAGATATTAGAAGAATCT
GGCCCCAAGGTGGTAGTACGTGAGAGTAATGATGAAGACAAGGTTGAAGA
CAGTGATGACGGTTTGGACGATGACGAAGAGAACGACAAAGACGGTGTAG
CTCTACATGATGTTGTAGTTGACGAAGATAGCAATGATGACGTTCCCGAT
GATGCTGATGACAACAACGACACCGACGACACCGACGACACCAACGGCGC
CGACGACGACGGCGACGACGACGACGACGACGGCGACGACGCTGACGATG
ACGACGCGGATGACGCCGACGACGCGGATGACGTCGATGAAGTCGATGAC
GACGACGATGATGTTGATGATGAAGGTAATGAAGGTCGTTGA
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