Gchil5069.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5069.t1
Unique Name	Gchil5069.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	575

Homology

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BLAST of Gchil5069.t1 vs. uniprot
Match: A0A2V3J520_9FLOR (DUF4042 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J520_9FLOR)

HSP 1 Score: 349 bits (896), Expect = 2.850e-106
Identity = 205/555 (36.94%), Postives = 327/555 (58.92%), Query Frame = 0

Query:   11 VQTLLKSLLQRALDQPETDLTARVACASALANALSSSVALLEPNFLSWIASQIVESLHPNQPVAELLVAFRAVVYVRCDLFSYGWFKIKAHLQNMSSTSEVALHTVRVFSSFLSSCLRAQQLSEKETG-LYQYIPLLINVYDSLVKDSLQSSDRVLRNSAVNVVQQVFQFHSAVASSA-------VHCNHEMEFNALGKDAIRRLKQFIIARDEQVLAACIRTIAHAHLLVDSNFTEDTLRIIGDVMQGSANSGKQVTKFCMSSMTLIAEKLSEKFVFLITEEIVLIITKCASIAAEMIRNIPGLNAASCMKSSSERASEEATKTAAVNLITSYISVHMSICERKGNSKEFIADMSSEVQLLCQLLQNSEQTLNLRCCTCRALGRVVSAHSRSLKQCG----DDILRNIMAAMSPLNEVRMQICSASSLIAIMKSSHKDMFCVAIVQSCIKCYIGVMRQLQRSGVTAKLRTQQNILLDSIGELVVIVFGKALETLVCDVEKNWNMQWEPNVLIAIVSSYLSLPKYVKYESNFDFDKVMDCTPQGQRDALKVILNL 553
            +QT+L++LL RALDQ  TDLTAR+ACASAL NALS+S  LLEP F++   S+I  SL  +QPVAELL + RA+V  R DLFS  WF I+  L+++ S  ++ALH VRVF +FL++ LR  ++ + E   L + IP++++VY  L++  L++ +R+L  SAV  V+ + QFHSA+A  A         C HE+E  A+ ++A+ R+K       + V AA IR +  AH  V  +F   T + + + M+ S   G  + +FCMSSMT++ + L          E++ ++      A E ++ +   N ++  KS+S+RA+ E+ KTAA+ LI       + + E +   + F  +  +  +LLC+L+QN  +T+NLRCC C+ALG ++S      ++      D IL  I+ A+SP N +R+QIC+A+SL+++M  S  D   + ++++CIKC++ V+  +Q+       +TQQ IL +++GELV   F +     +  +  NW  +W+  VLI+ VS+YLS+P Y    S+      M+ +P   R  ++ I  L
Sbjct:  326 IQTILEALLHRALDQSRTDLTARIACASALGNALSTSAVLLEPCFVNTTVSRITTSLDSSQPVAELLASLRAIVDARADLFSNSWFMIRNQLRDLCSNQDIALHAVRVFDTFLTATLRRPKVLDLEDSVLLERIPVVLDVYHFLIESCLETDNRILCTSAVTAVRLLLQFHSAIAEGASALAAPRYSCKHELE--AVVENAVHRMKHLASTASDSVRAAAIRALVFAHPEVQQDFPLTTFKFLFNTMRSSGKDGSLIARFCMSSMTILVDILLPNRDRWRNGELLTVLEDATLFAVETLQCLRLTNTSTESKSASDRANTESNKTAAIGLIVCLFRTLVMLGESEARMESFGKEEMNLFRLLCELVQNDSETVNLRCCCCKALGSIISVDEGGPRKTPLKWFDCILDVIIDAVSPKNNLRIQICAATSLLSVMAQSSADHARIRVIRNCIKCHLAVVSDVQKGATAKNTKTQQRILQNTLGELVFETFLRTPNDSLATLASNWEKEWDSKVLISCVSTYLSIPSYAMGASSESEFLFMETSPDAMRVVMEKIFRL 878

The following BLAST results are available for this feature:

BLAST of Gchil5069.t1 vs. uniprot

BLAST of Gchil5069.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J520_9FLOR	2.850e-106	36.94	DUF4042 domain-containing protein n=1 Tax=Gracilar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..500 e-value: 7.5E-7 score: 29.7
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 17..486

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004393_pilon	contig	tig00004393_pilon:2559942..2561666 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5069.t1	Gchil5069.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004393_pilon 2559942..2561666 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5069.t1 ID=Gchil5069.t1|Name=Gchil5069.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=575bp
MPTSAMVVPSVQTLLKSLLQRALDQPETDLTARVACASALANALSSSVAL
LEPNFLSWIASQIVESLHPNQPVAELLVAFRAVVYVRCDLFSYGWFKIKA
HLQNMSSTSEVALHTVRVFSSFLSSCLRAQQLSEKETGLYQYIPLLINVY
DSLVKDSLQSSDRVLRNSAVNVVQQVFQFHSAVASSAVHCNHEMEFNALG
KDAIRRLKQFIIARDEQVLAACIRTIAHAHLLVDSNFTEDTLRIIGDVMQ
GSANSGKQVTKFCMSSMTLIAEKLSEKFVFLITEEIVLIITKCASIAAEM
IRNIPGLNAASCMKSSSERASEEATKTAAVNLITSYISVHMSICERKGNS
KEFIADMSSEVQLLCQLLQNSEQTLNLRCCTCRALGRVVSAHSRSLKQCG
DDILRNIMAAMSPLNEVRMQICSASSLIAIMKSSHKDMFCVAIVQSCIKC
YIGVMRQLQRSGVTAKLRTQQNILLDSIGELVVIVFGKALETLVCDVEKN
WNMQWEPNVLIAIVSSYLSLPKYVKYESNFDFDKVMDCTPQGQRDALKVI
LNLTRSLMRTVKQDVGDGASSTGT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold