Gchil6259.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6259.t1
Unique NameGchil6259.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length112
Homology
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BLAST of Gchil6259.t1 vs. uniprot
Match: A0A2V3IZF1_9FLOR (Protein Asterix n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZF1_9FLOR)

HSP 1 Score: 157 bits (396), Expect = 1.200e-47
Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    1 MPIISRTDPRDESRCTPLNVVPVSVEELPPDYYAILGLCFAFFAVLFKVKMYAWLTCLFSISSLANQRYSCTDSKNLVATISLIVLTFLSTHTTLAGRPVMAPVFPWLRQ 110
            MP+ISR DPRDE R T L V+PV VE+LPPDYYA+L L FAF AVL KVKM++WLT LF +SSLANQR+SCTD KN +A  +LIVLTF+STH  +AG+PVMAP+FPWLR+
Sbjct:    1 MPLISRPDPRDEKRITALKVIPVPVEQLPPDYYALLALMFAFAAVLTKVKMHSWLTFLFCVSSLANQRFSCTDLKNNLAFAALIVLTFVSTHLNIAGQPVMAPIFPWLRK 110
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BLAST of Gchil6259.t1 vs. uniprot
Match: R7QAG0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAG0_CHOCR)

HSP 1 Score: 134 bits (337), Expect = 1.160e-38
Identity = 60/105 (57.14%), Postives = 85/105 (80.95%), Query Frame = 0 
Query:    6 RTDPRDESRCTPLNVVPVSVEELPPDYYAILGLCFAFFAVLFKVKMYAWLTCLFSISSLANQRYSCTDSKNLVATISLIVLTFLSTHTTLAGRPVMAPVFPWLRQ 110
            RTDPR E R   + + PVS+++L  D+Y++  L FAF A++FK+++Y+WLTCL S +SLANQRYS  DSK++VAT+SLIVLTF+STH ++ G+PVMAP+ PWL++
Sbjct:    5 RTDPRSEERIRQMEIAPVSIDDLSSDFYSLSALVFAFMAIMFKIRIYSWLTCLLSFASLANQRYSSMDSKSVVATLSLIVLTFISTHVSVKGQPVMAPMLPWLQR 109
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BLAST of Gchil6259.t1 vs. uniprot
Match: A0A5J4Z686_PORPP (Protein Asterix n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z686_PORPP)

HSP 1 Score: 56.6 bits (135), Expect = 3.900e-8
Identity = 27/75 (36.00%), Postives = 45/75 (60.00%), Query Frame = 0 
Query:   14 RCTPLNVVPVSVEELPPDYYAILGLCFAFFAVLFKVKMYAWLTCLFSISSLANQRYSCTDSKNLVATISLIVLTF 88
            R  P   V    E+ P D + +L +    F ++FK++MY W T LF ++S+AN + S  DSK L+++  L+++TF
Sbjct:   16 RVVPFKHVVKPAEDAPVDAFMLLSMVCGVFVLVFKIRMYCWFTLLFFMASVANSKASEVDSKQLISSFFLVLMTF 90
The following BLAST results are available for this feature:
BLAST of Gchil6259.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IZF1_9FLOR1.200e-4770.00Protein Asterix n=1 Tax=Gracilariopsis chorda TaxI... [more]
R7QAG0_CHOCR1.160e-3857.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z686_PORPP3.900e-836.00Protein Asterix n=1 Tax=Porphyridium purpureum Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005351PAT complex subunit AsterixPFAMPF03669UPF0139coord: 7..90
e-value: 1.2E-14
score: 53.9
IPR005351PAT complex subunit AsterixPANTHERPTHR13193CGI-140coord: 5..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availableTMHMMTMhelixcoord: 77..96
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004388_piloncontigtig00004388_pilon:188748..189275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6259.t1Gchil6259.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004388_pilon 188748..189275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6259.t1 ID=Gchil6259.t1|Name=Gchil6259.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=112bp
MPIISRTDPRDESRCTPLNVVPVSVEELPPDYYAILGLCFAFFAVLFKVK
MYAWLTCLFSISSLANQRYSCTDSKNLVATISLIVLTFLSTHTTLAGRPV
MAPVFPWLRQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005351ASTER