Gchil8203.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8203.t1
Unique NameGchil8203.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length363
Homology
BLAST of Gchil8203.t1 vs. uniprot
Match: A0A2V3IZ79_9FLOR (Blue-light photoreceptor PHR2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ79_9FLOR)

HSP 1 Score: 273 bits (697), Expect = 2.130e-86
Identity = 167/330 (50.61%), Postives = 192/330 (58.18%), Query Frame = 0
Query:   45 PRSAASSSAQPLTTAESRRASTHAERAP-----PVGAARHP----------VVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAARDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRARVSPGHIPPNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTSFG-RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAEFELMLREFSRFDSLR 358
            P +  + +  P ++  SR     A  AP     P+ AA  P          VVVVWFR DLRLHDN C+  +   VVAPL             AA DLR ALR RG EL+VR A  D   V  AV  FC  VRAD LH +A V RE RV E RVRREVAA+G     FWS GL SPEQLPF+VQDMP DCDAFA+AVR VR+ EPLP P   R V   V PGHIP  C +                   GGE+ AL  L EYCSGALA+V  G+L TSFG RL PFL++GC+S RLLW R VA  + ++RRYCAE ELML EF RF  L+
Sbjct:    7 PLALGARTHAPTSSVASRSLPLCASPAPFAQCTPLAAANAPHPDAAAPCSQVVVVWFRSDLRLHDNPCLTGIEDCVVAPLLVLGENAQQASLDAAHDLRDALRRRGCELFVRRAARD---VVAAVSHFCSTVRADRLHFSAGVSREQRVLEQRVRREVAAMGTDVTTFWSGGLFSPEQLPFAVQDMPQDCDAFANAVRTVRVDEPLPVPDSFRPVSG-VQPGHIP-GCIKGC-----------------GGEKVALCGLDEYCSGALAKVDGGKLRTSFGGRLEPFLKMGCISPRLLWKRVVADGENSLRRYCAEIELMLLEFRRFMMLK 314          
BLAST of Gchil8203.t1 vs. uniprot
Match: A0A0K9RPR3_SPIOL (Photolyase/cryptochrome alpha/beta domain-containing protein n=5 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RPR3_SPIOL)

HSP 1 Score: 101 bits (251), Expect = 4.690e-20
Identity = 95/350 (27.14%), Postives = 153/350 (43.71%), Query Frame = 0
Query:   49 ASSSAQPLTTAESRRASTHAERAPPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAA-----------------RDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIP--------PNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS--FG-----RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAE----------FELMLREFSRF 354
            +SSSA PL    S      ++  P  GAA     +VWFR DLR+HDN C+   ++  ++ L             ++                  DLR +LRARG++L VR    +     T +    + V AD L+V  +V +    AE ++   +   G+    FW   L   E LPF ++ MP +   F + V+ +++ + + A  +L+G+ +R  V  G IP        PN     D                GGE EA+QRLQ++ +   A+  K +  T+  +G     ++ P+L +GC+S R ++      A RT+     +          FEL+ R+F RF
Sbjct:   87 SSSSASPLQNPLSLNPRLPSD--PSNGAAARRATIVWFRNDLRVHDNECLTTANNESMSVLPVYCFDPRDYGKSSSGFDKTGPFRASFVVESVTDLRKSLRARGSDLVVRVGKPE-----TVLVEMAKAVGADALYVHREVSKGEAKAEGKIEAAMKEEGIEVKYFWGSTLYHLEDLPFELKGMPTNYGGFREKVQGLKVRDTVAALDQLKGLPSRGDVEAGEIPSLVELGLNPNATLSQDGKPSVNGSLV------GGETEAMQRLQKFAAECKAQPPKSKDGTNSIYGANFSCKISPWLAMGCLSPRHMFDELKKTASRTISASNRKDGDDGMNWLMFELLWRDFFRF 423          
BLAST of Gchil8203.t1 vs. uniprot
Match: UPI00053F97E2 (blue-light photoreceptor PHR2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F97E2)

HSP 1 Score: 99.8 bits (247), Expect = 1.600e-19
Identity = 86/327 (26.30%), Postives = 142/327 (43.43%), Query Frame = 0
Query:   72 PPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAA-----------------RDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIP--------PNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS--FG-----RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAE----------FELMLREFSRF 354
            P  GA      +VWFR DLR+HDN C+ + ++  ++ L             ++                  DLR  LR RG++L VR    +     T +    + + AD ++V  +V +E   AE R+   +   GV    FW   L   E LPF +++MP +   F +  + +++ E + A  + +G+ +R  V PG IP        PN     D                GGE EA+QRL+++ +   A+  K +  T+  +G     ++ P+L +GC+S R ++      A RT+     +          FEL+ R+F RF
Sbjct:  108 PSNGAVARRAAIVWFRNDLRVHDNECLTNANNESMSVLPLYCFDPRDYGKSSSGFDKTGPFRASFLIESVSDLRKNLRERGSDLVVRIGKPE-----TVLVEMAKIIGADAVYVHREVSKEEVKAEARIETAMKEEGVELKYFWGSTLYHMEDLPFKLEEMPTNYGGFREKAQGLKVRETIAALDQFKGLPSRGDVEPGEIPSLVDLGLNPNATLSQDGKPAANGSLV------GGETEAMQRLRKFAAECKAQPPKSKDGTNSIYGANFSCKISPWLAMGCLSPRHMFDELKKTASRTISASNRKDGDDGMNWLMFELLWRDFFRF 423          
BLAST of Gchil8203.t1 vs. uniprot
Match: A0A7C8ZDU8_OPUST (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZDU8_OPUST)

HSP 1 Score: 98.6 bits (244), Expect = 4.150e-19
Identity = 91/327 (27.83%), Postives = 141/327 (43.12%), Query Frame = 0
Query:   72 PPVGAARHPVVVVWFRRDLRLHDNACV--ADLHHAVVAPLXXXXXXXXXXXXX---------------AARDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIP--------PNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS--FG-----RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAE----------FELMLREFSRF 354
            P  GAA     +VWFR DLR+HDN C+  A+     V PL                            +  DLR +L+ARG++L VR    +     T +    + + AD ++   +V  E   +E RV + +   GV     W   L   + LPF ++DMP +   F + V+ + + + + A  +L+G+ +R  V PG IP        PN     D                GGE EALQRLQ++ +   A+  K +  T   +G     ++ P+L +GC+S R ++      A RT+     +          FEL+ R+F RF
Sbjct:  113 PSNGAALRRAAIVWFRNDLRVHDNECLTTANNESTSVLPLYCFDPRDYGKSSSGFDKTGPYRASFLIQSVSDLRNSLQARGSDLVVRIGKPE-----TVLVEIAKEIGADAVYAHREVSTEEVKSEERVEKALKEEGVDVKYLWGSTLYHLDDLPFKLEDMPTNYGGFRERVQGLNVRDTIAALDQLKGLPSRGDVEPGEIPSLVDLGLNPNVTLRQDGKPAAHASMV------GGETEALQRLQKFAAECRAQPPKTKDGTKSIYGANFSCKISPWLAMGCLSPRHMFDELKKTASRTISASNRKDGDDGMNWLMFELLWRDFFRF 428          
BLAST of Gchil8203.t1 vs. uniprot
Match: E1Z506_CHLVA (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z506_CHLVA)

HSP 1 Score: 97.8 bits (242), Expect = 7.210e-19
Identity = 97/304 (31.91%), Postives = 126/304 (41.45%), Query Frame = 0
Query:   46 RSAASSSAQPLTTAESRRASTHAERAPPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXX-----------------AARDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVR--ARVSPGHIPP--NCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTSFG-----RLGPFLELGCVSAR 323
            +SAA    QP  T +       A  AP  GA R P +V WFR DLRLHDN  +A       + L                              A  DLRAALRA G+EL VR    +   V   VRR      A Y H   +V  E   AE  VR    A G R  A+W++ L   + LPFS+  +P + D F + +  V +   LPAP  L G+    RV PG IP                         RGGE EAL++LQ + + A  +   G +  + G      + P+L  GC+S R
Sbjct:   77 QSAARGVRQPQPTRQPAGVGDGA--APGCGAGRRPGIV-WFRGDLRLHDNEALARAQAECSSLLPVYCFDPREYGKSPQGYDKTGPYRAQFLAEAVADLRAALRAAGSELVVRVGRPE-EVVGELVRR--TGAGAVYCHT--EVAYEDLRAEAAVRAAAEAGGARLRAYWANTLCHLDDLPFSLDQLPQNFDKFREQIGGVAVRAALPAPQELHGLPLGGRVDPGDIPTLEQLGLQPLPAAAATGSIGEGGSPRGGEGEALRQLQRFVAAAGGQAAAGPVAAAHGSNFSANIAPWLATGCLSPR 372          
BLAST of Gchil8203.t1 vs. uniprot
Match: A0A1Q3BG04_CEPFO (DNA_photolyase domain-containing protein/FAD_binding_7 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BG04_CEPFO)

HSP 1 Score: 96.7 bits (239), Expect = 1.990e-18
Identity = 90/330 (27.27%), Postives = 138/330 (41.82%), Query Frame = 0
Query:   72 PPVGAARHPVVVVWFRRDLRLHDNACV--ADLHHAVVAPLXXXXXXXXXXXXX---------------AARDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIP--------PNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS-FG-----RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAE--------------FELMLREFSRF 354
            P  GAA     +VWFR DLR+HDN  +  A+     V P+                            +  DLR  L+A+G +L VR    +     T +    + + AD ++   +V  +   AE ++   +   GV    FW   L   + LPF V+DMP +   F + ++ + I + + A  +L+G+ +R  V PG IP        PN     D                GGE EALQRL+++ +   A+  KG  H S +G     ++ P+L +GC+S R ++      A RT+                    FELM R+F RF
Sbjct:  118 PSNGAAIRKASIVWFRNDLRVHDNETLNTANTESMSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQAKGTDLVVRIGNPE-----TVLVELVKAIGADAVYAQREVSHDEVKAEEKIETAMKDEGVEVKYFWGSTLYHVDDLPFKVEDMPSNYGGFREKLQGLDIRKTIEALDQLKGMPSRGDVEPGEIPSLVDLGLNPNTAMAQDGKPAVNASMV------GGETEALQRLKKFTADCQAQPPKGGSHDSIYGANFSCKISPWLAMGCISPRSMFDELKKTATRTISAGSKRDDGSSSDTGSNWLMFELMWRDFFRF 436          
BLAST of Gchil8203.t1 vs. uniprot
Match: U5GQX7_POPTR (Photolyase/cryptochrome alpha/beta domain-containing protein n=13 Tax=Saliceae TaxID=238069 RepID=U5GQX7_POPTR)

HSP 1 Score: 95.5 bits (236), Expect = 4.860e-18
Identity = 87/324 (26.85%), Postives = 137/324 (42.28%), Query Frame = 0
Query:   72 PPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAA-----------------RDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIPPNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS-FG-----RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAE----------------FELMLREFSRF 354
            P   A      +VWFR DLR+HDN C+   ++  ++ L             ++                  DLR  L+ARG++L VR    +     T +    + + AD ++   +V  +   AE ++   +   GV    FW   L   + LPF ++DMP +   F + V+ + I + +    +L+G+ +R  V PG IP N      +               GGE EALQRL ++ +   A+  KG  H S +G     ++ P+L +GCVSAR ++      A RT+                      FELM R+F RF
Sbjct:  116 PSNAAGTRRACIVWFRNDLRVHDNECLNSANNDSMSVLPVYCFDPRDYGKSSSGFDKTGPYRANFLIESVSDLRKNLQARGSDLVVRVGRPE-----TVLVELAKAIGADAVYAHREVSHDEVKAEEKIEELMKDEGVEVKYFWGSTLYHLDDLPFKLEDMPSNYGGFKEKVQGLEIRKTIETLDQLKGLPSRGDVEPGDIP-NLLDLGLNPAQDGKAAANASMV-GGETEALQRLNKFAAECQAQPPKGGSHESIYGANFSCKISPWLTMGCVSARSMFDELKKTATRTISAASNHNSGGSSSPGAGMNWLMFELMWRDFFRF 432          
BLAST of Gchil8203.t1 vs. uniprot
Match: A0A1U8ABQ0_NELNU (blue-light photoreceptor PHR2 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8ABQ0_NELNU)

HSP 1 Score: 95.5 bits (236), Expect = 5.050e-18
Identity = 93/362 (25.69%), Postives = 150/362 (41.44%), Query Frame = 0
Query:   45 PRSAASSSAQPLTTAESRRASTHAERAPPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAA-----------------RDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIP--------PNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS----FG-----RLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAE----------------FELMLREFSRF 354
            P   ++ SA PL    SR     ++ + P G  R  +V  WFR DLR+HDN C+   ++  ++ L             ++                  DLR  L++RG++L VR    +   V  A       + AD ++   +V  +   AE ++   +   GV    FW   L   + LPF ++ MP +   F + V+ + + + + A  +LRG+ AR  V PG IP        P+     D                GGE EALQRLQ++ +   ++  KG   +S    +G     ++ P+L +GC+S R ++      A RT+                      FEL+ R+F RF
Sbjct:   92 PSFKSTISASPLQIPLSRGPRRSSDPSNPTGVRRSSIV--WFRNDLRVHDNECLTSANNESISVLPVYCFDPRDYGKSSSGFDKTGPYRATFLIESVSDLRRNLQSRGSDLVVRIGKPEVVLVEMA-----RAIGADAVYAHREVSHDEVRAEDKIEAAMKEEGVEVKYFWGSTLYHVDDLPFKLEKMPSNYGGFKEKVQRLEVRKTIAALDQLRGLPARGDVEPGEIPTLLDLGLNPSATMAQDGKPAVNALV-------GGETEALQRLQKFAAECHSQPNKGGNDSSRDSIYGANFSCKISPWLAMGCLSPRFMFDELKKSAIRTISAAAPRKDGGSGSSDTGMNWLMFELLWRDFFRF 439          
BLAST of Gchil8203.t1 vs. uniprot
Match: A9NVB3_PICSI (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NVB3_PICSI)

HSP 1 Score: 95.1 bits (235), Expect = 8.780e-18
Identity = 75/283 (26.50%), Postives = 121/283 (42.76%), Query Frame = 0
Query:   72 PPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAA-----------------RDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIPPNCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQK----GRLHTSFG-----RLGPFLELGCVSARLLW 326
            P   AA     +VWFR DLR+HDN  ++  +   ++ L             ++                  +LRA LR RG++L VR    +   V  A     + + AD L+   +V  E    E +++  +   GV T  FW   L  PE LPF +QDMP +   F + V+ + + + +  P +L+G+  R  V PG +P       +                GGE EALQRL+ +      +  K    G   + +G     ++ P+L +GC+S R ++
Sbjct:  180 PSNAAALRKAAIVWFRNDLRVHDNEALSSANKEALSVLPVYCFDPRDYGKSSSGFDKTGPFRATFLLECVANLRANLRERGSDLVVRIGRPEEVLVELA-----KSIGADALYAHQEVSHEEIATEEKIKSSLEEEGVETKFFWGSTLYHPEDLPFKLQDMPSNYGGFRERVQRLSVRQIIKDPEQLKGLPTRGDVEPGKVPSLLDLGLNPNFGQDGKTAVNASLTGGESEALQRLKRFAVECREQPNKLGKDGSGESLYGANFSCKISPWLAMGCLSPRYMF 457          
BLAST of Gchil8203.t1 vs. uniprot
Match: A0A835N882_9ROSI (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835N882_9ROSI)

HSP 1 Score: 94.7 bits (234), Expect = 9.010e-18
Identity = 80/297 (26.94%), Postives = 130/297 (43.77%), Query Frame = 0
Query:   72 PPVGAARHPVVVVWFRRDLRLHDNACVADLHHAVVAPLXXXXXXXXXXXXXAA-----------------RDLRAALRARGAELYVRHATHDAPAVATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSDGLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRAR--VSPGHIPP------NCCQYADDXXXXXXXXXXXXXXRGGEREALQRLQEYCSGALARVQKGRLHTS-FG-----RLGPFLELGCVSARLLWWRAVAPAQRTV 337
            P   A      +VWFR DLR+HDN C+   ++  ++ L             ++                  DLR  L+ARG++L VR    +     T +    + + AD ++   +V  +   AE ++   +   GV    FW   L   + LPF ++DMP +  AF + V+ + I + +    +L+G+ +R  V PG +P       +  Q  DD               GGE EALQRL ++ +   A+  KG  H S +G     ++ P+L +GCVS R ++      A RT+
Sbjct:  115 PSNAAGTRRACIVWFRNDLRVHDNECLNSANNDSMSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGRPE-----TVLVELAKAIGADAVYAHREVSHDEVKAEEKIEELMKDEGVEVKYFWGSTLYHLDDLPFKLEDMPSNHGAFKEKVQGLEIRKTIETLDQLKGLPSRGDVEPGDVPNLLDLGLSPAQKLDDGKAAVNASML-----GGETEALQRLNKFAAQCQAQPPKGGSHESIYGANFSCKISPWLTVGCVSPRSIFDELKKAASRTI 401          
The following BLAST results are available for this feature:
BLAST of Gchil8203.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ79_9FLOR2.130e-8650.61Blue-light photoreceptor PHR2 n=1 Tax=Gracilariops... [more]
A0A0K9RPR3_SPIOL4.690e-2027.14Photolyase/cryptochrome alpha/beta domain-containi... [more]
UPI00053F97E21.600e-1926.30blue-light photoreceptor PHR2 n=1 Tax=Beta vulgari... [more]
A0A7C8ZDU8_OPUST4.150e-1927.83Photolyase/cryptochrome alpha/beta domain-containi... [more]
E1Z506_CHLVA7.210e-1931.91Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A1Q3BG04_CEPFO1.990e-1827.27DNA_photolyase domain-containing protein/FAD_bindi... [more]
U5GQX7_POPTR4.860e-1826.85Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A1U8ABQ0_NELNU5.050e-1825.69blue-light photoreceptor PHR2 n=1 Tax=Nelumbo nuci... [more]
A9NVB3_PICSI8.780e-1826.50Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A835N882_9ROSI9.010e-1826.94Photolyase/cryptochrome alpha/beta domain-containi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 47..199
e-value: 2.5E-12
score: 48.7
NoneNo IPR availableGENE3D1.25.40.80coord: 201..359
e-value: 3.4E-20
score: 74.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..362
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 82..238
e-value: 1.2E-16
score: 61.1
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 80..202
score: 14.413651
IPR002081Cryptochrome/DNA photolyase class 1PANTHERPTHR11455CRYPTOCHROMEcoord: 81..354
IPR036134Cryptochrome/DNA photolyase, FAD-binding domain-like superfamilySUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 278..354
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 81..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:679643..680731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8203.t1Gchil8203.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 679643..680731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8203.t1 ID=Gchil8203.t1|Name=Gchil8203.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=363bp
MPNAIVSAFVAPLSRPAPPAPRPPLTSVAPAAPVARAADATRATPRSAAS
SSAQPLTTAESRRASTHAERAPPVGAARHPVVVVWFRRDLRLHDNACVAD
LHHAVVAPLLLLPSSPPPLLLAAARDLRAALRARGAELYVRHATHDAPAV
ATAVRRFCEHVRADYLHVAADVRREARVAELRVRREVAALGVRTVAFWSD
GLLSPEQLPFSVQDMPDDCDAFADAVRHVRIAEPLPAPLRLRGVRARVSP
GHIPPNCCQYADDDGRRRDDEQREDEERGGEREALQRLQEYCSGALARVQ
KGRLHTSFGRLGPFLELGCVSARLLWWRAVAPAQRTVRRYCAEFELMLRE
FSRFDSLRRLPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR006050DNA_photolyase_N
IPR002081Cryptochrome/DNA_photolyase_1
IPR036134Crypto/Photolyase_FAD-like_sf
IPR036155Crypto/Photolyase_N_sf