Gchil8275.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8275.t1
Unique NameGchil8275.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length517
Homology
BLAST of Gchil8275.t1 vs. uniprot
Match: A0A2V3IM73_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM73_9FLOR)

HSP 1 Score: 456 bits (1173), Expect = 2.330e-153
Identity = 251/370 (67.84%), Postives = 298/370 (80.54%), Query Frame = 0
Query:    1 MIHGLKVSLAKGTTKKKIIKGDESLSATKNTLYQWRTSVQSLLACVVSNEEAWNSIFSTYNSFETIGSSIYPEKDSPVRMLLVDLQSAKSRLDTPESSAVESNFNAVQRLDMSKKELSALLVRIDNTEHLHETRLDVIRQHKYYDAKTRQMLQNESKRRNPVSQKELERRSRNQTKVQELAQEMANMNRNIYAEMDAIEVERLAVADRALSAMLLLQRHYFDANPLKSIIAKADEIGLGHRVLMRSEQRPWISTDNATLPNVATPQSPLPNSAYPPYSPSAGGAAFPRVDTAPTAPPPDDGSSGYGTSYSPMXXXXXXXXXXXXXXXSSNAYGSPRHTNGPTSYAMPATSQSASRPPVPLASTPQTSHGY 370
            MIHGLKVSLAKGTTKKKIIK DESL+ATK TLYQWR+S+QSLL CV +NEEAWNS+F++Y++F+ IGSSIYPE+D P   LL +LQ+ KSRLDTP S+ VE+NFNA QRLD+SKKEL A++ RID TE+LHE RLDVIRQHKYYDAKTRQMLQNE+KRR+PV+QKE+ERRSRNQ KVQELA+E+ANM+R IY+EMDAIEVERLAV DRA+SAMLLLQ+HYF+A PL+S I+KADEIGLGHRVL+R ++RPW+S++   L    T   P  N AYPPY+PSA  A FPRV++AP+APPPDDGSS YG  YSPM     XXXXXXX     N Y  P ++  P+SY   +TS     PP    S PQTS+GY
Sbjct:    1 MIHGLKVSLAKGTTKKKIIKEDESLAATKGTLYQWRSSMQSLLNCVTTNEEAWNSLFNSYSTFDIIGSSIYPERDVPALALLKELQATKSRLDTPPSNTVETNFNATQRLDLSKKELLAIIARIDETENLHEKRLDVIRQHKYYDAKTRQMLQNEAKRRSPVTQKEVERRSRNQAKVQELAKEVANMHRQIYSEMDAIEVERLAVTDRAISAMLLLQKHYFEAQPLRSTISKADEIGLGHRVLLRGDRRPWVSSETKVLNESRTQNEP--NVAYPPYNPSAESAPFPRVESAPSAPPPDDGSSNYGAGYSPMPQSPSXXXXXXX-----NNYQVPPNSAPPSSYLPTSTSYP---PPXXXGSVPQTSNGY 360          
BLAST of Gchil8275.t1 vs. uniprot
Match: R7QQJ1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQJ1_CHOCR)

HSP 1 Score: 143 bits (360), Expect = 8.930e-35
Identity = 72/196 (36.73%), Postives = 131/196 (66.84%), Query Frame = 0
Query:    1 MIHGLKVSLAKGTTKKKIIKGDESLSATKNTLYQWRTSVQSLLACVVSNEEAWNSIFSTYNSFETIGSSIYPEKDSPVRMLLVDLQSAKSRLDTPESSAVESNFNAVQRLDMSKKELSALLVRIDNTEHLHETRLDVIRQHKYYDAKTRQMLQNESKRRNPVSQKELERRSRNQTKVQELAQEMANMNRNIYAEMD 196
            ++HGLKV+++  T+K++I + DES   T+ TL  W+ ++++L   + +NE AW ++F+++ +F T  +++Y   D   R ++  L+SA++ ++ P +   +  +  +Q+++ +++EL+A+L RI N E LH  RL+  RQ+KYYD KT+QML+NE+K    VS + LERR+RNQ  V +LA ++ ++   +Y E+D
Sbjct:  140 VMHGLKVTMSPATSKREITESDESHRVTQQTLATWKAALRALHDALATNEAAWKNLFASFTTFSTAAAAVYSATDIESRAVVKALESARTAVEAPPT---DPGYTPMQKVEFARQELAAMLSRIQNAEALHAKRLETTRQYKYYDRKTKQMLENEAKPGKTVSVERLERRTRNQKNVMDLAIQLNSITTQLYTELD 332          
The following BLAST results are available for this feature:
BLAST of Gchil8275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM73_9FLOR2.330e-15367.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQJ1_CHOCR8.930e-3536.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 267..283
score: 29.41
coord: 304..316
score: 38.46
coord: 341..357
score: 34.12
coord: 432..457
score: 34.62
coord: 317..338
score: 32.73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..516
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 16..235
e-value: 8.0E-11
score: 43.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:991627..993177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8275.t1Gchil8275.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 991627..993177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8275.t1 ID=Gchil8275.t1|Name=Gchil8275.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=517bp
MIHGLKVSLAKGTTKKKIIKGDESLSATKNTLYQWRTSVQSLLACVVSNE
EAWNSIFSTYNSFETIGSSIYPEKDSPVRMLLVDLQSAKSRLDTPESSAV
ESNFNAVQRLDMSKKELSALLVRIDNTEHLHETRLDVIRQHKYYDAKTRQ
MLQNESKRRNPVSQKELERRSRNQTKVQELAQEMANMNRNIYAEMDAIEV
ERLAVADRALSAMLLLQRHYFDANPLKSIIAKADEIGLGHRVLMRSEQRP
WISTDNATLPNVATPQSPLPNSAYPPYSPSAGGAAFPRVDTAPTAPPPDD
GSSGYGTSYSPMPQPPPPPPPPPPPPSSSNAYGSPRHTNGPTSYAMPATS
QSASRPPVPLASTPQTSHGYNAYVQGASPVTSTINPNAYRPETSPTSNQM
GYTFHPPQPAGAPSNQTNYHSSSSATGYHHPPSSYPPTSSPVGFSAPAPP
PPPPPPPPPRSPSTSYSAPYSVQARTENQPSPTPSPPPAPRFAYETPAGG
TETSQNAAEKKGPNSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf