Gchil8267.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8267.t1
Unique NameGchil8267.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length227
Homology
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A2V3IFX0_9FLOR (Endoribonuclease YbeY n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFX0_9FLOR)

HSP 1 Score: 278 bits (710), Expect = 5.440e-91
Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 0
Query:   28 VCHAPAKSRVARRRLIPTAQTAHPSLPNKDVDWIFVDTVVKTQEFIVSEKLQREIQDDALSLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSVQQDSTYRDIAQS 226
            VC++  K   + R L P    A  S PNK+VDWIFVDTVVK Q  +V E L+R IQDDA++L+RVA RDAPTEL VVLCDD+EIS+LNSRWRGID  TDVLSFPQ+DPDKV+LGDIVISVETA +QA  R YDV++E+RVLLVHGLLHLMGYDHEG +EGDWLVMAKMEN  L +LGW GEGL+SSVQ DS YRDI QS
Sbjct:   88 VCNS-RKVHGSNRALYPKTPFAQLSPPNKEVDWIFVDTVVKGQAELVPEALERNIQDDAMTLIRVARRDAPTELSVVLCDDREISELNSRWRGIDKFTDVLSFPQDDPDKVLLGDIVISVETAKEQAAAREYDVKDEIRVLLVHGLLHLMGYDHEGAVEGDWLVMAKMENKILKELGWHGEGLVSSVQ-DSFYRDIVQS 284          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A7S2NFY5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NFY5_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 5.710e-36
Identity = 86/217 (39.63%), Postives = 124/217 (57.14%), Query Frame = 0
Query:   17 LGASFL-KQKKYVCHAPAKSRVARRRLIPT-AQTAHPSLPNKDVDWIFV---------------DTVVKTQEFIVSEKLQREIQDDALSLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSVQQ 216
            L  SFL  Q   + H P+    ARR  +P  A+T+  +L   D++ + V               + V+ +++  +  +   E + DA +L+  A  D   +L + LCDD  +  LN +WR +D  TDVLSFP  DP   +LGD+VIS+ETA +QA ER+Y +R+ELRVL+VHG+LHL+GYDHE   E D+  MA  E   L +LGW G GLI +  +
Sbjct:   22 LATSFLLPQHARLDHLPS----ARRNKLPQRARTSAVTLYADDIEDVEVFDDDDNHPLSMLPLLERVLVSEQGAIDSRWSVEAEQDACALLAAAGLDEGEQLSLTLCDDAWMHDLNFKWRSVDAPTDVLSFPMEDPR--LLGDLVISLETASRQAAERSYALRDELRVLMVHGVLHLLGYDHE-TGEADYAEMAAAERKLLKRLGWVGVGLIDAAAE 231          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A7S0GUX7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GUX7_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 1.320e-35
Identity = 69/145 (47.59%), Postives = 94/145 (64.83%), Query Frame = 0
Query:   78 LQREIQDDALSLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSVQQDSTYRD 222
            L +E Q+DA SL+  +  D+  EL + LCDD  I   N   RGID  TDVLSFP  D    ++GD++IS++ A  QADER Y +R+E+R+L+VHGLLHL+GYDH+   EGDW  MA+ E   + +LGW G GL+     D+ + D
Sbjct:  108 LVQETQEDAYSLLEASKIDS-VELSLTLCDDDTIRGYNKEHRGIDKPTDVLSFPLQDD--YMIGDLIISIDKAQSQADEREYGLRDEIRILMVHGLLHLLGYDHDKS-EGDWKEMAEAERKLIDRLGWSGSGLVDLADIDAPHHD 248          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A7S1TFJ3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFJ3_9RHOD)

HSP 1 Score: 134 bits (336), Expect = 3.270e-35
Identity = 82/190 (43.16%), Postives = 110/190 (57.89%), Query Frame = 0
Query:   39 RRRLIPTAQTAHPSLPNK--DVDWIFVDTVVKTQEF-IVSEKLQREIQDDALSL-------VRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSVQQDS 218
            RR L P  Q    +      D +  F +  V  ++  +  E L   I+ DA SL       V  A R    E+ VVL  D  I +LN +WRG+D  TDVLSFPQ + D+ +LGD++ISVETA +QA ERN+  R+E+R+LLVHGLLHL+GYDHE V +  +  M  ME+  L  L W G GLI + Q+ +
Sbjct:   43 RRHLYPRLQLIESTTDGMSWDEEDGFENVFVSVEDLDLPDESLVHSIESDAHSLWNTSVTFVEAAARRPHAEVSVVLSSDAFIQRLNRQWRGLDHPTDVLSFPQGEDDQDLLGDLIISVETAHRQAQERNHSDRDEIRILLVHGLLHLLGYDHE-VNQLQFDQMRAMEHQLLKSLRWTGTGLIDASQEST 231          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A0M0JMW7_9EUKA (Metalloprotease ybey n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JMW7_9EUKA)

HSP 1 Score: 131 bits (330), Expect = 2.320e-34
Identity = 68/132 (51.52%), Postives = 93/132 (70.45%), Query Frame = 0
Query:   83 QDDALSLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHE-GVIEGDWLVMAKMENMFLTQLGWQGEGLISS 213
            ++DA +L+  A  D   +L + LCDD  I QLNS WR +D  TDVLSFP +D    +LGD+VIS++TA +QA ER +++R+ELR+L+VHG+LHL+GYDHE G +E     MA+ E   LT+LGW G GLI +
Sbjct:   95 EEDACALLAAAGLDDGEQLSLTLCDDPYIQQLNSEWRSVDEPTDVLSFPMDDDQ--LLGDLVISIDTARRQASERAHELRDELRILMVHGVLHLLGYDHEDGDVEHR--EMAEAERTLLTRLGWTGRGLIDA 222          
BLAST of Gchil8267.t1 vs. uniprot
Match: L1JYL1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JYL1_GUITC)

HSP 1 Score: 130 bits (326), Expect = 5.520e-34
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   70 QEFIVSEKLQREIQDDALSLVRVALR-------DAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSVQ 215
            ++  +SE+   +++ DA S++            D   EL +VLC D  I  LN +WR  DT TDVLSFPQ + D  +LGD+VISV+TA  QA ER +D+R+E+RVL+VHG LHL+GYDHE   E D   MA+ E+  L++LGWQ  GLI+ V+
Sbjct:   58 EDIDLSEQFVEDLRWDAHSIISSVFNPESDLDYDEHIELSIVLCSDVWIRGLNKKWRQKDTATDVLSFPQ-ETDNDILGDLVISVQTAEAQAAERGHDLRHEMRVLMVHGFLHLLGYDHE-TGEEDKAEMARAEDKLLSRLGWQSAGLIARVE 208          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A7S4BCP9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCP9_CHRCT)

HSP 1 Score: 127 bits (319), Expect = 2.910e-31
Identity = 70/133 (52.63%), Postives = 89/133 (66.92%), Query Frame = 0
Query:   81 EIQDDALSLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISS 213
            EI+ DALSL+R A  D   EL + LCD   I+Q N RWRG+D  TDVLSFP  D   V++GD++I V+ A +QA +R + +R+ELRVLLVHG+LHL GYDHE   E D   MA  E   + +L W+G GLI S
Sbjct:  210 EIETDALSLLRAAALDV--ELSLSLCDAAFITQQNKRWRGVDQPTDVLSFPVEDD--VMIGDVLICVDVAQRQAQDRGHTLRDELRVLLVHGVLHLCGYDHE-TDEADAAEMAAAETKLMRRLHWKGNGLIVS 337          
BLAST of Gchil8267.t1 vs. uniprot
Match: M2WZD9_GALSU (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZD9_GALSU)

HSP 1 Score: 123 bits (308), Expect = 4.280e-31
Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = 0
Query:   88 SLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLIS 212
            S+V   ++ A  EL ++LC D  IS LNS+WR     TDVLSF Q +  + +LGDIVISVETA KQA ERNY +R+E+RVLLVHG LHL+GYDHE   E     M ++EN  L+ L W+G+GL++
Sbjct:  105 SIVLGVIQPARYELSLLLCSDNYISSLNSKWRNKKEPTDVLSFAQEE--QTLLGDIVISVETAYKQALERNYSLRDEIRVLLVHGFLHLLGYDHEES-EQRRDEMEELENKLLSSLQWKGKGLVA 226          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A388LF45_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LF45_CHABU)

HSP 1 Score: 126 bits (317), Expect = 1.620e-30
Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = 0
Query:  100 ELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQND-PDKV---VLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSV 214
            EL V++CDD  I  LN  WRG+D  TDVLSF Q + P+ V   +LGD+VISV+TA +QA ER Y + +E+RVLLVHGLLH +GYDHE   E + L+MA+ E   L+ LGW+G GLI++V
Sbjct:   14 ELSVMVCDDPHIQLLNKEWRGVDEATDVLSFAQEEMPEGVKTLLLGDVVISVDTAQRQAQERKYSLHDEMRVLLVHGLLHCLGYDHEQG-EEEALLMAEEEERILSALGWKGHGLINNV 131          
BLAST of Gchil8267.t1 vs. uniprot
Match: A0A7S0P0T7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P0T7_9EUKA)

HSP 1 Score: 120 bits (300), Expect = 2.390e-30
Identity = 65/133 (48.87%), Postives = 90/133 (67.67%), Query Frame = 0
Query:   84 DDALSLVRVALRDAPTELCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETAVKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFLTQLGWQGEGLISSVQQ 216
            +DAL +++    +   EL + LCD+  +  LN++WRG D++TDVLSFP  D  +V++GD+VI +  A +QA ER + +R+E+RVLLVHGLLHLMGYDHE  +E   L M   E + LT+L W   GLISS  Q
Sbjct:   57 NDALQILQAV--NLTVELSLTLCDNAFMRALNAQWRGKDSSTDVLSFPVED--EVMVGDVVICLSVAERQAAERGHSLRDEVRVLLVHGLLHLMGYDHEVSLEAA-LEMEAAEQLLLTRLQWANNGLISSSGQ 184          
The following BLAST results are available for this feature:
BLAST of Gchil8267.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFX0_9FLOR5.440e-9171.36Endoribonuclease YbeY n=1 Tax=Gracilariopsis chord... [more]
A0A7S2NFY5_9EUKA5.710e-3639.63Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0GUX7_9EUKA1.320e-3547.59Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S1TFJ3_9RHOD3.270e-3543.16Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A0M0JMW7_9EUKA2.320e-3451.52Metalloprotease ybey n=1 Tax=Chrysochromulina tobi... [more]
L1JYL1_GUITC5.520e-3447.06Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4BCP9_CHRCT2.910e-3152.63Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
M2WZD9_GALSU4.280e-3153.60Haloacid dehalogenase-like hydrolase family protei... [more]
A0A388LF45_CHABU1.620e-3055.46Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A7S0P0T7_9EUKA2.390e-3048.87Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002036Endoribonuclease YbeYTIGRFAMTIGR00043TIGR00043coord: 100..203
e-value: 4.5E-30
score: 102.0
IPR002036Endoribonuclease YbeYPFAMPF02130YbeYcoord: 88..203
e-value: 7.8E-35
score: 119.5
IPR002036Endoribonuclease YbeYPANTHERPTHR46986ENDORIBONUCLEASE YBEY, CHLOROPLASTICcoord: 98..218
IPR002036Endoribonuclease YbeYHAMAPMF_00009Endoribonucl_YbeYcoord: 62..207
score: 21.087727
IPR023091Metalloprotease catalytic domain superfamily, predictedGENE3D3.40.390.30Metalloproteases ("zincins"), catalytic domaincoord: 60..209
e-value: 1.2E-38
score: 133.9
NoneNo IPR availablePANTHERPTHR46986:SF1ENDORIBONUCLEASE YBEY, CHLOROPLASTICcoord: 98..218
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 79..206
IPR020549Endoribonuclease YbeY, conserved sitePROSITEPS01306UPF0054coord: 171..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:973577..974344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8267.t1Gchil8267.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 973577..974344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8267.t1 ID=Gchil8267.t1|Name=Gchil8267.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=227bp
MSEQPQTFAFVLGTHALGASFLKQKKYVCHAPAKSRVARRRLIPTAQTAH
PSLPNKDVDWIFVDTVVKTQEFIVSEKLQREIQDDALSLVRVALRDAPTE
LCVVLCDDQEISQLNSRWRGIDTTTDVLSFPQNDPDKVVLGDIVISVETA
VKQADERNYDVRNELRVLLVHGLLHLMGYDHEGVIEGDWLVMAKMENMFL
TQLGWQGEGLISSVQQDSTYRDIAQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002036YbeY
IPR023091MetalPrtase_cat_dom_sf_prd
IPR020549YbeY_CS