Gchil8217.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8217.t1
Unique NameGchil8217.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length266
Homology
BLAST of Gchil8217.t1 vs. uniprot
Match: A0A7S0BLS4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLS4_9RHOD)

HSP 1 Score: 153 bits (386), Expect = 5.290e-42
Identity = 82/213 (38.50%), Postives = 118/213 (55.40%), Query Frame = 0
Query:   50 WRAFRAQLAVNQRLRCQPPPHHAALATAAVAAAHWAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGAAEVVPGVYRGGFNASRGLVAAGTLPPHAFRFLVAYSQWTRATLRAELQRGAWIIVSCSPSLLLHAHTPTLWRTIMRLI 262
            WR FR +L   +  R              V++  WAH    +E G  L++  +H W     H  ++V+L+T  +  +  GL+LNR     V    S+ ARVG  F DN ++LGGDCS G++EM+H+  P  CAGA E+VPG+Y+GGFNASR L+      P +FRFL+ Y+QW    LR E++   W  V+CS +LLL      LW  ++ L+
Sbjct:   39 WRDFRLRLIEKEGGR------------VGVSSRGWAHEVNVIEPGTCLISNANHQWSETHKHRNKAVVLVTKATDTEFTGLMLNRELGQYVHDIPSIEARVGREFRDNPVHLGGDCSLGTIEMIHSVRPERCAGAEEIVPGLYKGGFNASRELIQDRIADPSSFRFLLGYTQWKTEDLRREIKNRVWHQVACSTNLLLAGTGEQLWHDVLSLV 239          
BLAST of Gchil8217.t1 vs. uniprot
Match: C1E5G6_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E5G6_MICCC)

HSP 1 Score: 95.5 bits (236), Expect = 4.150e-19
Identity = 64/181 (35.36%), Postives = 93/181 (51.38%), Query Frame = 0
Query:   84 WAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGAAEVVPGVYRGGFNASRGLVAAGTLPPHAFRFLVAYSQWTRATLRAELQRGAWIIVSCSPSLLLHA--HTPT-LWRTIMRL 261
            WAH     E+G +LLAA D  +     +  ++VILL +       G++LNR T+Y++     V  +    F +NALY GGD   G++  LH        G+AEV+PGVY GG++++  LV    +  + F+F   Y  W    L+ E +RG W  V+CS  L L      P  LWR I+ L
Sbjct:  175 WAHRIGAPEKGCLLLAAAD-EFTLGQQYFHQAVILLLEHHDKGSMGVILNRPTQYNMGY---VSGQSDGPFAENALYFGGDVGDGTVSFLHGSDKV--QGSAEVLPGVYLGGYDSACELVKKEEVDANEFKFFARYCGWAPGQLKRECERGVWYPVACSKQLALKQVIQLPKPLWREILEL 349          
BLAST of Gchil8217.t1 vs. uniprot
Match: A0A2P6TF74_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TF74_CHLSO)

HSP 1 Score: 88.2 bits (217), Expect = 1.240e-16
Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 0
Query:   48 TDWRAFRAQLAVNQRLRCQPPPHHA------ALATAAVAAAHWAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGAAEVVPGVYRGGFNASRGLVAAGTLPPHAFRFLVAYSQWTRATLRAELQRGAWIIVSCS 242
            +DWRAFRA+L  + +         +          A  A A WAH+    E+G +LLA+P   +  +  +   +VIL+         G++LNR T Y V    +  A +        LYLGGD    S+ +LH         +AEV+PGV+ GGF  ++  +A G   P  F+ L  Y+ W    L AE +RG W+ VS +
Sbjct:   89 SDWRAFRAKLVASSKASVAAADEASDAEGXXXXXXAGTADAPWAHSLLGPEQGCLLLASPL-MFATSQQYFNMAVILIFAHDEKGSAGIILNRPTEYKVGDLGAGAASLQPELSPCTLYLGGDVGQESVHLLHGVRGL--QQSAEVIPGVFLGGFEGAKQGLAEGRYKPEQFKVLTRYAGWGPGQLAAECRRGVWLSVSAN 286          
BLAST of Gchil8217.t1 vs. uniprot
Match: A0A7S0BKH6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BKH6_9RHOD)

HSP 1 Score: 84.3 bits (207), Expect = 5.360e-16
Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 0
Query:   50 WRAFRAQLAVNQRLRCQPPPHHAALATAAVAAAHWAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGA 184
            WR FR +L   +  R              V++  WAH    +E G  L++  +H W     H  ++V+L+T  +  +  GL+LNR     V    S+ ARVG  F DN ++LGGDCS G++EM+H+  P  C GA
Sbjct:   39 WRDFRLRLIEKEGGR------------VGVSSRGWAHEVNVIEPGTCLISNANHQWSETHKHRNKAVVLVTKATDTEFTGLMLNRELGQYVHDIPSIEARVGREFRDNPVHLGGDCSLGTIEMIHSVQPERCPGA 161          
BLAST of Gchil8217.t1 vs. uniprot
Match: A0A7S3A8Q3_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8Q3_9RHOD)

HSP 1 Score: 72.8 bits (177), Expect = 2.420e-11
Identity = 50/187 (26.74%), Postives = 82/187 (43.85%), Query Frame = 0
Query:   84 WAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGAAEVVPGVYRGGFNASRGLVAAGTLPPHAFRFLVAYSQWTRATLRAELQRGAWIIVSCSPSLLLHAH-----TPTLWRTIMRLISSS 265
            W H     E G +LLA P    +    + + +VILL         G+++N+R +    Q +S+     A   +N +Y GGD       M      T     AEV+PGV+ GG+         GT+ P   +  + Y  W    L+ E+++  WI  +CS  ++L AH     +   WR + +L+  +
Sbjct:  107 WCHLLTAAEPGCLLLANPKFFGENQ-VYFRHAVILLLQSDENGAHGIIINKRMK---TQLKSMSTEPNA-LSNNRIYFGGDVGE---TMFFIHDYTDLRNTAEVLPGVFCGGYEEILEAAERGTINPERVKVFLRYCGWAPQQLQDEIEKKVWIPAACSKEVVLSAHVDIADSEAFWRKLYKLMGKA 285          
BLAST of Gchil8217.t1 vs. uniprot
Match: A0A7S3A9L4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9L4_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 9.490e-8
Identity = 49/175 (28.00%), Postives = 72/175 (41.14%), Query Frame = 0
Query:   45 LCTTDWRAFRAQLAVNQRLRCQPPPHHAALATAAVAAAHWAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGAAEVVPGVYRGGFNASRGLVAAGTLPPHAFRFLVAY 219
            LCT DWR FRA+L + +R              A      W H     E G +LLA P    +    + + +VILL         G+++N+R +    Q +S+     A   +N +Y GGD       M      T     AEV+PGV+ GG+         GT+ P   +  + Y
Sbjct:   37 LCTGDWREFRAKLVLGER------------DVAVEKDCEWCHLLTAAEPGCLLLANPKFFGENQ-VYFRHAVILLLQSDENGAHGIIINKRMK---TQLKSMSTEPNA-LSNNRIYFGGDVGE---TMFFIHDYTDLRNTAEVLPGVFCGGYEEILEAAERGTINPERVKVFLRY 191          
BLAST of Gchil8217.t1 vs. uniprot
Match: A0A7S3AAE4_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAE4_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 2.240e-7
Identity = 51/177 (28.81%), Postives = 76/177 (42.94%), Query Frame = 0
Query:   45 LCTTDWRAFRAQLAVNQRLRCQPPPHHAALATAAVAAAHWAHTQPHVERGAVLLAAPDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARVGACFGDNALYLGGDCSTGSLEMLH--AQPPTLCAGAAEVVPGVYRGGFNASRGLVAAGTLPPHAFRFLVAY 219
            LCT DWR FRA+L + +R              A      W H     E G +LLA P    +    + K +VILL         G+++N+R +    Q +S+     A   +N +Y GGD    ++  +H  A  P      AEV+PGV+ GG+         GT+ P   +  + Y
Sbjct:   37 LCTGDWREFRAKLVLGER------------DVAVEKDCEWCHLLSSAEPGCLLLANPKVFGENQ-VYFKHAVILLLQSDEDGAHGIIINKRMK---TQLKSMSTEPNA-LSNNRIYFGGDVGE-TMFFIHDYADLPN----TAEVLPGVFCGGYGEILEAAERGTIDPERVKVFLRY 191          
The following BLAST results are available for this feature:
BLAST of Gchil8217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A7S0BLS4_9RHOD5.290e-4238.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
C1E5G6_MICCC4.150e-1935.36Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
A0A2P6TF74_CHLSO1.240e-1631.84Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A7S0BKH6_9RHOD5.360e-1634.81Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A8Q3_9RHOD2.420e-1126.74Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A9L4_9RHOD9.490e-828.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3AAE4_9RHOD2.240e-728.81Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1740.10coord: 91..265
e-value: 1.8E-30
score: 107.7
NoneNo IPR availablePANTHERPTHR31984:SF1OS10G0330400 PROTEINcoord: 19..263
NoneNo IPR availablePANTHERPTHR31984TRANSPORTER, PUTATIVE (DUF179)-RELATEDcoord: 19..263
NoneNo IPR availableSUPERFAMILY143456VC0467-likecoord: 82..262
IPR003774Protein of unknown function UPF0301PFAMPF02622DUF179coord: 111..261
e-value: 1.1E-19
score: 71.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:708405..709202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8217.t1Gchil8217.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 708405..709202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8217.t1 ID=Gchil8217.t1|Name=Gchil8217.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=266bp
MAFVSPVPLRLGRPRGCVRRVRSASSRCVSASAAADDAPSLSETLCTTDW
RAFRAQLAVNQRLRCQPPPHHAALATAAVAAAHWAHTQPHVERGAVLLAA
PDHHWQPAFAHLKRSVILLTDVSAGDVRGLLLNRRTRYSVRQQRSVLARV
GACFGDNALYLGGDCSTGSLEMLHAQPPTLCAGAAEVVPGVYRGGFNASR
GLVAAGTLPPHAFRFLVAYSQWTRATLRAELQRGAWIIVSCSPSLLLHAH
TPTLWRTIMRLISSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003774UPF0301