Gchil8165.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8165.t1
Unique Name	Gchil8165.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	779

Homology

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BLAST of Gchil8165.t1 vs. uniprot
Match: A0A2V3IVJ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ4_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 1.230e-24
Identity = 124/409 (30.32%), Postives = 193/409 (47.19%), Query Frame = 0

Query:  379 TRAPLLRALLRAMDRLALRAAQRDVADAAVQRRLEAAARLVPALAAPHHPPVLQLALSSRARGVVPNFHRQPPPRAAPIFLVARLRPSDAFAAAAALPTLSLRVAVDVPRASRTCTV------------FDAPLP-LSGGE--PLSFPLFVCSHAPLRVRAELLAALGPAAAPPLRVVLRAQPPLLDVLCMASSVGDNDNHDNIDNXXXXXXXXXXXXQRADHSAMRLARPFVTPRRAASLSVRLRLPFAPHDVARVLQLRLSHTAHFRTLLRAPFSLLLSAESNAAVVVIAAPAHVAPFVRAAVLRRVRALPPLHAVLAPCAPRVSAIAAAALA-ERPLTPLFAAAEDRLVDAVRVFSALPRAVDDCHALLHHDAELPDDGGLAAWLRAGSAAVRAYRAVRRERDAVW 771
            T+ P +R LL+A+DRL LR+A++   D AVQ+ +  A     +L +   P  + L +S   +G VP FH   PPR+  ++++A L+   +     +L +LSL++ +   R   T ++            F APLP L+  +   +SFPL++ SHAP  V+A +  ++   +  PL + +  +  LLD+L  ++ V                          D SA   A PF  P +A     RL +P++   V ++L L+   T HFR+LL APFSLLLS    A  + + AP HV PFVRAA+LRR+    P   ++    P +   +              A  E++LV+AV+VF  L                     G   W  + + A +AYRA RRE + +W
Sbjct:  310 TKQPAIRPLLQAIDRLTLRSAEQSATDTAVQQNISTALHTFASLKSAPMPLSVTLTVSDSPQGHVPAFHLPHPPRSKQVYVIAHLQSQHS----GSLSSLSLQLTLAPHRIKSTSSMPKPNRNHPHGQSFSAPLPTLTSADCVKVSFPLYLSSHAP--VKAAVSLSIDIPSTEPLELAIGDE--LLDILSYSNRVSQLGE---------------------DTSAAIFAMPFSDPHKATIQHSRLCVPYSLTQVQQILSLKPEPT-HFRSLLGAPFSLLLSG-GRACTITLRAPTHVTPFVRAALLRRLMQTKP-EPIIVKGIPNIRTWSKELKGCVEKCESSSAETEEKLVEAVKVFEDLENGAGA--------------DGTRIWKESLAKAAQAYRAWRREGENIW 672

The following BLAST results are available for this feature:

BLAST of Gchil8165.t1 vs. uniprot

BLAST of Gchil8165.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IVJ4_9FLOR	1.230e-24	30.32	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 562..586
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..579
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 343..360
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 295..342
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..275
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 276..294
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 361..778

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:391272..393608 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8165.t1	Gchil8165.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 391272..393608 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8165.t1 ID=Gchil8165.t1|Name=Gchil8165.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=779bp
MAAATVRDARVLSPRVLHAACGDTLFALVVPHAAPHRVCAVAPACARHLP
RSLVVCVEPVVYGGGDDNNDDDDDDDDDALRERVPVAALLQLPPSRAAHL
TLPLPLPLPLLPSPPPRPSSPTAAAVVVVRAVVRHNVQHVVALVPLRPVH
HASPFCVECAFTVVARAALAELRCAPLPSLTMREVARHARRDTAAPALAL
CVSSSSSSPSLLVVSRAGRVHVADRVTDCITVASASAAAAAAAAAAAAPV
VAHLRQPPVAAFAFALAFDSASPSRPLPAVALLGCFGALVVLVFHPSRPP
HVVVVANLRAVVARFDFAPQPCAHARALLLRPTSHRPRQLPTVLLRVAPA
PAALLLRLPFAPLSSSSSSSSPSPSPSPTRAPLLRALLRAMDRLALRAAQ
RDVADAAVQRRLEAAARLVPALAAPHHPPVLQLALSSRARGVVPNFHRQP
PPRAAPIFLVARLRPSDAFAAAAALPTLSLRVAVDVPRASRTCTVFDAPL
PLSGGEPLSFPLFVCSHAPLRVRAELLAALGPAAAPPLRVVLRAQPPLLD
VLCMASSVGDNDNHDNIDNHDDDDNNNSNNNQRADHSAMRLARPFVTPRR
AASLSVRLRLPFAPHDVARVLQLRLSHTAHFRTLLRAPFSLLLSAESNAA
VVVIAAPAHVAPFVRAAVLRRVRALPPLHAVLAPCAPRVSAIAAAALAER
PLTPLFAAAEDRLVDAVRVFSALPRAVDDCHALLHHDAELPDDGGLAAWL
RAGSAAVRAYRAVRRERDAVWPSCAAAE*