Gchil3145.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3145.t1
Unique NameGchil3145.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length348
Homology
BLAST of Gchil3145.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 286 bits (732), Expect = 1.960e-88
Identity = 132/228 (57.89%), Postives = 177/228 (77.63%), Query Frame = 0
Query:  114 ARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAK 341
            ++P   HPYR G K RE+   ++E+M K  VIEP     SEWAS +VLV K DGS+R CVDYRKLN+++ +D+YP+P MDE +DSLG A +F+TL+ NSGY +IP+ E+ R  TTFT+H G +RF RMPFGL NAPATFQR +DIILSRVKWK  LVYLDD I+FSRT++EHF H+++V ++L+ AG+T K  KC FF+ +VDYLGHV++PG+L +AT+ T+A++Q +
Sbjct:  359 SKPVHSHPYRAGPKAREMERQEVERMLKADVIEPAC---SEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSGYWQIPINEEDRDKTTFTSHVGAYRFIRMPFGLCNAPATFQRSLDIILSRVKWKSCLVYLDDVIVFSRTIEEHFGHLQEVFSLLERAGITLKFSKCHFFKDTVDYLGHVIVPGRLAIATKNTDALKQGE 583          
BLAST of Gchil3145.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 251 bits (640), Expect = 6.640e-72
Identity = 123/209 (58.85%), Postives = 153/209 (73.21%), Query Frame = 0
Query:  139 MCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPPRTHT 347
            M + +VIEP     SEWAS +VLVAK DGS R CVDYR+LNA++ RDSYP+P MDEC+DSLG A +F TL+ NSGY +IP+  + R  TTFT+HEGL+ F RMPFGL+NAPATFQR +DI LS + WK  LVYLDD I+FS+T  EH  H+  VL  L  AG+T  L+KC FF+ +VDYLGHV+ PG+L VA + T A++  K P T T
Sbjct:    1 MLQAKVIEP---TTSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQT 206          
BLAST of Gchil3145.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR)

HSP 1 Score: 227 bits (578), Expect = 6.210e-69
Identity = 107/179 (59.78%), Postives = 136/179 (75.98%), Query Frame = 0
Query:  169 VRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPPRTHT 347
            +R CVDYR+LNA++ +DSYP+P M++CLDSLG A  F TL+ NSGY +IP+AE  R  TTFT HEG ++F RMPFGL NAPATFQR +DI+LS  +WK  LVY DD IIFS  ++EH  HV++VL +LQDAG++ KL KC FF  SVDYLGHV+ PG L VA + T+AI++A+   T T
Sbjct:    4 LRFCVDYRRLNAITVKDSYPLPKMEDCLDSLGDAKCFTTLDCNSGYWQIPVAEADREKTTFTCHEGCYQFRRMPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAIKKAQERTTQT 182          
BLAST of Gchil3145.t1 vs. uniprot
Match: UPI001E1D2C1D (uncharacterized protein LOC123544039 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C1D)

HSP 1 Score: 236 bits (603), Expect = 9.450e-67
Identity = 147/380 (38.68%), Postives = 217/380 (57.11%), Query Frame = 0
Query:    2 TQIAVSVHYKSS--SLVRIQNHPKTVLKHLTLMANGVMDIQ-PKSSFLATISNFRDKPVRLPNVTVIGI----------TLPEPVA----------IMEAQVDILATQTPEEDVES-------WEGTI----AIGADFESYGPQDDARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPPRTHT 347
            T+  +SVH   S  SL+R   H   V   +    NG++++  P S F   ++NF  +PV L +  V+G+          T+P   +          I+ +Q   L+    E+ + +       W+G +    A+     + GP     P    PYR G   R+ +  ++++M +  VIEP       WAS +VL+ K DGSVR CVDYR+LNA++ +DSY +P +D+ LDSLG A  F+TL+ANSGY +I +    R  TTFTTH GL+RF R+PFGL +APATFQR +D+ILS V+++ AL YLDD I+FS T ++H R +  VL++++DAGVT KL KC F    V YLG++V    L+V     ++++ A PP+T T
Sbjct:  466 TETLLSVHTDRSGVSLIRAPRHRHDVTAQVK---NGLIELPAPGSKFNCWVANFSSRPVALKSGQVVGVAEAQVVSHVFTVPTEASNSDTSDEWENIVRSQTSHLSENESEKLLTTLRPHASLWDGHLGNIDAVQHHIPTTGP-----PLATQPYRVGPASRDSIDAELQRMKEMDVIEPA---EGPWASPVVLIPKPDGSVRFCVDYRRLNAVTTKDSYALPRVDDSLDSLGGAQYFSTLDANSGYWQISVNPADRDKTTFTTHRGLYRFKRLPFGLVSAPATFQRAIDVILSTVRFRCALTYLDDIIVFSFTFEQHMRDLDLVLSLVRDAGVTLKLVKCRFAAPEVPYLGYIVGREGLRVDNSKISSLQAAVPPKTKT 834          
BLAST of Gchil3145.t1 vs. uniprot
Match: A0A164HM17_9CRUS (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164HM17_9CRUS)

HSP 1 Score: 212 bits (539), Expect = 2.560e-62
Identity = 99/210 (47.14%), Postives = 142/210 (67.62%), Query Frame = 0
Query:  113 DARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVV 322
            +A P F  PYR     R+++ +++ +M +D +I+P   ++S W+S +VLV KK G  R CVDYR+LNA++KRD YP+P MD+  D L  A +F+ L+  SGY ++ +A+  R  T F T +GLF F R+PFGL NAPATFQR+MD +L R+KWK  LVYLDD ++F +T  EH   +++VL  L+ A +T  LRKC F  + V +LGHV+
Sbjct:   28 EANPVFGQPYRVSKFERDLINEKVGEMLRDGIIQP---SQSPWSSPVVLVRKKSGDHRFCVDYRRLNAVTKRDVYPLPRMDDVFDCLAGATIFSFLDLASGYRQVSVADSDRYKTAFVTPDGLFEFKRLPFGLSNAPATFQRLMDRVLGRLKWKMCLVYLDDILVFGKTFGEHQERLQQVLVALEKANLTLNLRKCVFGTSRVKHLGHVI 234          
BLAST of Gchil3145.t1 vs. uniprot
Match: A0A507C5M9_9FUNG (RNA-directed DNA polymerase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C5M9_9FUNG)

HSP 1 Score: 223 bits (567), Expect = 1.920e-61
Identity = 107/229 (46.72%), Postives = 156/229 (68.12%), Query Frame = 0
Query:  115 RPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPP 343
            RP    PYR     R+ + D+++++ K+ +++    +RS W+S +VLV KKDG++R CVDYRKLNA++ +DSYP+P+  + LD++ K   ++TL+  +GY +IP+A++  + T F TH+GL+ F RMPFGL NAPATFQR MD +LS +KW   LVYLDD +IFS T  +H + V+KVL  L +AG++ K  KC FF A V+YLGHVV    +K   R   A+++ K P
Sbjct:  462 RPIKTAPYRVPHDKRQYIKDRVQELLKNNIVQE---SRSPWSSPVVLVPKKDGTIRFCVDYRKLNAITVKDSYPLPLQQDLLDTIDKEF-YSTLDLAAGYWQIPVAKEDVSKTAFVTHDGLYEFIRMPFGLTNAPATFQRFMDTVLSGLKWHNCLVYLDDIVIFSNTFDDHLKDVEKVLNRLVNAGLSLKASKCDFFAAEVEYLGHVVSRHGIKPGPRKIQAVKEFKVP 686          
BLAST of Gchil3145.t1 vs. uniprot
Match: A0A815E5W6_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815E5W6_9BILA)

HSP 1 Score: 205 bits (522), Expect = 3.530e-61
Identity = 94/232 (40.52%), Postives = 151/232 (65.09%), Query Frame = 0
Query:  113 DARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPPR 344
            D++P    PYR     R+++   ++++ ++ +IEP   ++S WAS ++L  KKDGS+R CVDYRKLN+ + RD+YPIP +D+ LD+L +A   +TL+  SGY ++ + ++++  T F TH+GL+ F  MP+GL NA ATFQR+MDI+L+ +KW+  LVY+DD +I+S T ++H   +K V   L++A +T K  KC F +  + YLGH++    +K     T A+     P+
Sbjct:   11 DSKPYNSPPYRYAPAKRQVIEQNLKEIKEEGIIEP---SKSPWASPVILAPKKDGSMRFCVDYRKLNSTTIRDAYPIPRIDDTLDALQEAKFVSTLDLRSGYCQVEMDKESKEKTAFITHKGLYEFNVMPYGLTNATATFQRLMDIVLAGLKWQSCLVYIDDIVIYSPTFEQHLIDLKNVFQALREANLTLKASKCCFCRREMKYLGHIITQDGIKPDPTLTKAVSDFPQPK 239          
BLAST of Gchil3145.t1 vs. uniprot
Match: A0A6G5ABB9_RHIMP (Putative tick transposon (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ABB9_RHIMP)

HSP 1 Score: 209 bits (532), Expect = 6.830e-61
Identity = 100/211 (47.39%), Postives = 142/211 (67.30%), Query Frame = 0
Query:  112 DDARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVV 322
            +  RP  Q+PYR   K RE++  Q+++M +D VI+P   + S WAS +VLV KKD ++R CVDYRKLN+++KRD YP+P +D+ LD L  A  F++L+  SGY +I + E  R  T F T +GL+ F  +PFGL  APATFQR+MD +LS +KW+  LVYLDD ++FS T ++H   ++ VL  +Q AG+T K  KC F    + +LGHV+
Sbjct:  112 EQTRPVHQNPYRVSPKEREVIKGQVQEMLEDDVIQP---SNSPWASPVVLVRKKDNTLRFCVDYRKLNSVTKRDVYPLPRIDDTLDRLRHARYFSSLDLKSGYWQIEVDERDREKTAFVTPDGLYEFKALPFGLCCAPATFQRMMDSVLSGLKWQSCLVYLDDVVVFSATFEQHIERLRSVLHAIQSAGLTIKPEKCQFGYEKLRFLGHVI 319          
BLAST of Gchil3145.t1 vs. uniprot
Match: A0A816E766_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816E766_9BILA)

HSP 1 Score: 215 bits (547), Expect = 1.340e-60
Identity = 102/233 (43.78%), Postives = 155/233 (66.52%), Query Frame = 0
Query:  113 DARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPPRT 345
            +++P    PYR     R+I+   +++M ++ +IEP   ++S WAS +VL  KKDGS+R CVDYRKLN+++ RD+YPIP +D+ LDSL +A   +TL+  SGY ++ + +D++  T F TH+GL+ F  MPFGL NAPATFQR+MDI+L+ +KW+  LVY+DD +I+S   ++H   ++KV   L++A +T K  KC F +  + YLGHVV    +K     T A+ +   P+T
Sbjct:  307 ESKPCNSPPYRYAPAKRQIIEQNLKEMKEEGIIEP---SKSPWASPVVLAPKKDGSMRFCVDYRKLNSVTTRDAYPIPRIDDTLDSLQEAKFVSTLDLRSGYWQVEMDKDSKEKTAFITHKGLYEFNVMPFGLTNAPATFQRLMDIVLAGLKWQCCLVYIDDIVIYSPNFEQHLLDLEKVFLALREANLTLKASKCCFCRKEMKYLGHVVTQNGIKPDPTLTKAVTEFPQPKT 536          
BLAST of Gchil3145.t1 vs. uniprot
Match: A0A6G5ABR6_RHIMP (Putative tick transposon (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ABR6_RHIMP)

HSP 1 Score: 208 bits (529), Expect = 2.590e-60
Identity = 100/211 (47.39%), Postives = 144/211 (68.25%), Query Frame = 0
Query:  112 DDARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPPNRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLGKAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPATFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAGVTQKLRKCAFFQASVDYLGHVV 322
            +DARP  Q+PYR   K RE +  Q+ +M  D VIEP   + S W+S +VLV KKDGS+R CVDYRKLN ++K+D YP+P +D+ LD L +A  F +L+  SGY +I + +  R  T F T +GL++F  +PFGL +APATFQR+MD +L+ +KW+  LVYLDD ++FS T ++H + ++ VL  ++ A +T K +KC F    + +LGHVV
Sbjct:   23 EDARPIHQNPYRVSAKEREAIRTQVTEMLDDGVIEP---SNSPWSSPVVLVKKKDGSLRFCVDYRKLNNVTKKDVYPLPRIDDSLDRLRRAHYFTSLDLKSGYWQIEVDQRDREKTAFVTPDGLYQFRVLPFGLCSAPATFQRMMDTVLTGLKWQTCLVYLDDVVVFSATFEQHLQRLRSVLEAIRSADLTLKPQKCHFGYEELKFLGHVV 230          
The following BLAST results are available for this feature:
BLAST of Gchil3145.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1D3E381.960e-8857.89uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1E14076.640e-7258.85uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
R7QRD9_CHOCR6.210e-6959.78Retrotransposon protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D2C1D9.450e-6738.68uncharacterized protein LOC123544039 n=1 Tax=Merce... [more]
A0A164HM17_9CRUS2.560e-6247.14Reverse transcriptase domain-containing protein (F... [more]
A0A507C5M9_9FUNG1.920e-6146.72RNA-directed DNA polymerase n=1 Tax=Synchytrium mi... [more]
A0A815E5W6_9BILA3.530e-6140.52Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A6G5ABB9_RHIMP6.830e-6147.39Putative tick transposon (Fragment) n=1 Tax=Rhipic... [more]
A0A816E766_9BILA1.340e-6043.78Hypothetical protein n=2 Tax=Rotaria magnacalcarat... [more]
A0A6G5ABR6_RHIMP2.590e-6047.39Putative tick transposon (Fragment) n=1 Tax=Rhipic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 163..321
e-value: 2.0E-23
score: 83.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 143..322
score: 17.485197
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 112..247
e-value: 5.5E-71
score: 240.2
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 132..328
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 132..328
NoneNo IPR availableCDDcd01647RT_LTRcoord: 150..322
e-value: 1.47357E-78
score: 236.338
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 187..322
e-value: 5.5E-71
score: 240.2
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 111..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:445084..446214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3145.t1Gchil3145.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 445084..446214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3145.t1 ID=Gchil3145.t1|Name=Gchil3145.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=348bp
MTQIAVSVHYKSSSLVRIQNHPKTVLKHLTLMANGVMDIQPKSSFLATIS
NFRDKPVRLPNVTVIGITLPEPVAIMEAQVDILATQTPEEDVESWEGTIA
IGADFESYGPQDDARPQFQHPYRTGLKGREIVADQMEKMCKDQVIEPGPP
NRSEWASTLVLVAKKDGSVRICVDYRKLNALSKRDSYPIPVMDECLDSLG
KAVVFNTLEANSGYLKIPLAEDARALTTFTTHEGLFRFTRMPFGLKNAPA
TFQRVMDIILSRVKWKPALVYLDDFIIFSRTVKEHFRHVKKVLTILQDAG
VTQKLRKCAFFQASVDYLGHVVLPGKLKVATRTTNAIRQAKPPRTHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf