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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 45157.CMC011CT |
| Preferred name | ABCD3 |
| PFAMs | ABC_membrane_2,ABC_tran |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K05677 |
| KEGG TC | 3.A.1.203.1 |
| KEGG Pathway | ko02010,ko04146,map02010,map04146 |
| GOs | GO:0000038,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005324,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0005782,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006996,GO:0007031,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009653,GO:0009987,GO:0010033,GO:0010876,GO:0014070,GO:0015399,GO:0015405,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0015910,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019395,GO:0019752,GO:0022804,GO:0022857,GO:0030258,GO:0030554,GO:0030587,GO:0031090,GO:0031224,GO:0031231,GO:0031288,GO:0031300,GO:0031301,GO:0031903,GO:0031907,GO:0031974,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033036,GO:0034440,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042579,GO:0042623,GO:0042626,GO:0042760,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043492,GO:0043621,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046394,GO:0046395,GO:0046942,GO:0046983,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0055114,GO:0070013,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072330,GO:0090702,GO:0097159,GO:0097367,GO:0098533,GO:0098588,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1901265,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902495,GO:1904949,GO:1990351 |
| Evalue | 1.13e-229 |
| EggNOG OGs | COG4178@1|root,KOG0060@2759|Eukaryota |
| Description | ATP-binding cassette sub-family D |
| COG category | G |
| BRITE | ko00000,ko00001,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3934.t1 ID=Gchil3934.t1|Name=Gchil3934.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=704bp MTNAFSVLARQPRAALAAAAAVAATTGVLAHKWNAAVHSKRLDSAIYRPH AHAPQPLTAASPPPSRVDLRFVKTVAAFLRVAIRAPPSQEASVLALVAAL LAARSWLDLWASSNGGHVVKAIVARDRRSFVRRAVLDIVVMMFPMSFVNN SLRYSIARLKLLMRRRLSLYLHDKYLSNNTFYKLSNLDARIRNVDQLLTV DIDRFCSSLVDLYCNVSKPLFDIVLFSRRLSRSLGPSGPFCMILYFAACS VILRAIQPPFGQLAAEEQRLEGEYRLHHSRLITHSEEIAFFGGAAREKLY INHAFENLVAHLNKFFAARWRNGFVDAILVKYVATIVGYLVVSLPVFFTD SAIFRLFSSTGSGRHATANASAETTSASNIAGLYTRNSRLLLQLAGAIGR LVLAGSEVTRLTGYTHRVSRLEHVLDELCRAGAVRRRFESSSDLLHDAHL AHLMRPGKLVVADEGDTESSIRFESVNIVSPDGTVLCEGLSLEMERGCHV LTTGPNGCGKSSLFRVLAGLWPVYGGTIYRPARSRIFYVPQRPYLAMGSL RENVTYPMTWPEATAHGATDEMIMQLMVKVHLGDVARRRDGLDAVKDWAE VLSGGQKQRLAFGRLLFHAPQYAILDEASSAVSIDVEKALYEAVKKAGIT VISVSHRPSLWEFHDRVLAFDGSGGYEFRDIGDEDLRNLDSAQGGFGGDD AEG* back to topspliced messenger RNA >Gchil3934.t1 ID=Gchil3934.t1|Name=Gchil3934.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2112bp|location=Sequence derived from alignment at tig00000010_pilon:1475748..1477859- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACCAACGCCTTCTCCGTCCTCGCCCGTCAGCCCCGCGCCGCCCTGGC TGCGGCTGCCGCCGTCGCTGCCACCACTGGCGTGCTCGCCCACAAATGGA ATGCGGCCGTACACAGCAAACGTCTCGACTCTGCTATCTACAGACCCCAC GCACACGCTCCACAGCCTCTCACTGCCGCGTCGCCACCGCCATCGCGAGT GGACCTGCGCTTCGTCAAGACTGTCGCCGCCTTTCTACGAGTTGCCATTC GCGCTCCACCCTCGCAAGAGGCGTCGGTGTTAGCGCTTGTGGCCGCGTTG TTGGCCGCTCGCAGTTGGCTCGACTTGTGGGCCAGCTCAAATGGCGGCCA CGTCGTCAAGGCCATCGTTGCGCGCGACCGCCGCAGCTTCGTGCGTCGTG CCGTTCTGGACATTGTAGTGATGATGTTCCCCATGTCTTTCGTCAACAAT TCGCTTCGATACTCAATAGCGCGTCTTAAGCTACTCATGCGACGCCGTCT TTCGCTCTACTTACACGATAAGTACCTGTCGAACAACACTTTTTACAAAC TTTCCAATCTCGATGCGCGCATTCGCAACGTTGATCAATTGCTCACTGTG GACATTGACCGCTTCTGTTCCTCTCTCGTGGACTTGTACTGCAACGTTTC TAAGCCTTTGTTTGATATTGTTCTTTTCAGTCGCCGCCTGTCGCGCAGTC TAGGCCCTTCCGGCCCGTTCTGTATGATTCTTTACTTTGCTGCGTGCTCT GTCATTCTACGCGCAATCCAACCGCCCTTCGGTCAACTCGCAGCTGAGGA GCAGCGTCTTGAAGGCGAGTATCGTCTGCATCACTCTCGCCTTATTACGC ACTCAGAGGAAATTGCCTTCTTTGGTGGCGCGGCGCGTGAAAAACTGTAC ATCAATCATGCATTTGAGAACCTCGTCGCCCATCTGAACAAGTTTTTCGC AGCTCGTTGGCGCAATGGCTTTGTAGATGCTATCCTTGTCAAGTACGTCG CCACCATCGTCGGATACCTGGTGGTTTCGCTGCCAGTGTTCTTCACTGAT TCCGCCATATTCCGTCTATTCTCTTCGACGGGAAGTGGCCGTCACGCCAC GGCAAATGCCAGCGCGGAGACTACTTCAGCCTCCAATATTGCGGGTTTGT ACACTAGAAACTCTCGCCTTTTGTTGCAATTGGCCGGGGCCATTGGCAGA CTTGTACTCGCCGGCTCGGAAGTGACGCGTCTCACTGGGTACACGCATCG CGTCAGCAGGCTAGAGCATGTGCTGGACGAGCTTTGTCGTGCGGGTGCTG TGCGTCGTCGCTTCGAATCTTCGTCTGATCTGTTGCACGATGCGCATTTG GCGCATTTGATGCGGCCAGGAAAATTGGTTGTGGCAGATGAGGGCGACAC GGAGAGCAGCATACGTTTCGAGTCGGTGAACATCGTTTCGCCAGACGGGA CGGTTTTGTGCGAGGGGCTTTCACTGGAGATGGAGCGTGGATGTCACGTG TTGACGACCGGGCCCAATGGGTGTGGCAAGAGCTCGTTGTTCCGCGTGCT TGCGGGGCTATGGCCGGTGTATGGTGGTACGATTTACCGCCCGGCTCGTT CGCGTATCTTTTACGTACCGCAGCGGCCGTATCTGGCTATGGGATCGTTG CGTGAGAATGTGACGTACCCGATGACATGGCCAGAAGCCACGGCACATGG GGCGACGGATGAAATGATCATGCAGTTGATGGTAAAAGTGCATCTTGGAG ATGTTGCTCGACGGCGGGACGGGCTAGACGCCGTAAAGGATTGGGCAGAG GTGTTGAGTGGGGGCCAGAAACAAAGATTAGCGTTTGGGCGGCTGCTGTT TCATGCGCCACAGTATGCAATTCTTGATGAGGCGTCATCGGCGGTTTCTA TTGACGTGGAAAAGGCCTTGTATGAGGCAGTGAAGAAGGCAGGCATTACT GTGATTAGTGTGAGCCATCGTCCGAGCCTTTGGGAGTTTCATGATCGCGT TCTGGCGTTCGACGGAAGCGGTGGGTACGAGTTTCGAGACATTGGCGACG AGGATCTGCGCAATTTGGACTCCGCGCAGGGCGGATTTGGAGGAGATGAC GCTGAAGGCTGA back to topprotein sequence of Gchil3934.t1 >Gchil3934.t1 ID=Gchil3934.t1|Name=Gchil3934.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=704bp
MTNAFSVLARQPRAALAAAAAVAATTGVLAHKWNAAVHSKRLDSAIYRPH AHAPQPLTAASPPPSRVDLRFVKTVAAFLRVAIRAPPSQEASVLALVAAL LAARSWLDLWASSNGGHVVKAIVARDRRSFVRRAVLDIVVMMFPMSFVNN SLRYSIARLKLLMRRRLSLYLHDKYLSNNTFYKLSNLDARIRNVDQLLTV DIDRFCSSLVDLYCNVSKPLFDIVLFSRRLSRSLGPSGPFCMILYFAACS VILRAIQPPFGQLAAEEQRLEGEYRLHHSRLITHSEEIAFFGGAAREKLY INHAFENLVAHLNKFFAARWRNGFVDAILVKYVATIVGYLVVSLPVFFTD SAIFRLFSSTGSGRHATANASAETTSASNIAGLYTRNSRLLLQLAGAIGR LVLAGSEVTRLTGYTHRVSRLEHVLDELCRAGAVRRRFESSSDLLHDAHL AHLMRPGKLVVADEGDTESSIRFESVNIVSPDGTVLCEGLSLEMERGCHV LTTGPNGCGKSSLFRVLAGLWPVYGGTIYRPARSRIFYVPQRPYLAMGSL RENVTYPMTWPEATAHGATDEMIMQLMVKVHLGDVARRRDGLDAVKDWAE VLSGGQKQRLAFGRLLFHAPQYAILDEASSAVSIDVEKALYEAVKKAGIT VISVSHRPSLWEFHDRVLAFDGSGGYEFRDIGDEDLRNLDSAQGGFGGDD AEG* back to topmRNA from alignment at tig00000010_pilon:1475748..1477859- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3934.t1 ID=Gchil3934.t1|Name=Gchil3934.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2112bp|location=Sequence derived from alignment at tig00000010_pilon:1475748..1477859- (Gracilaria chilensis NLEC103_M9 male) ATGACCAACGCCTTCTCCGTCCTCGCCCGTCAGCCCCGCGCCGCCCTGGC
TGCGGCTGCCGCCGTCGCTGCCACCACTGGCGTGCTCGCCCACAAATGGA
ATGCGGCCGTACACAGCAAACGTCTCGACTCTGCTATCTACAGACCCCAC
GCACACGCTCCACAGCCTCTCACTGCCGCGTCGCCACCGCCATCGCGAGT
GGACCTGCGCTTCGTCAAGACTGTCGCCGCCTTTCTACGAGTTGCCATTC
GCGCTCCACCCTCGCAAGAGGCGTCGGTGTTAGCGCTTGTGGCCGCGTTG
TTGGCCGCTCGCAGTTGGCTCGACTTGTGGGCCAGCTCAAATGGCGGCCA
CGTCGTCAAGGCCATCGTTGCGCGCGACCGCCGCAGCTTCGTGCGTCGTG
CCGTTCTGGACATTGTAGTGATGATGTTCCCCATGTCTTTCGTCAACAAT
TCGCTTCGATACTCAATAGCGCGTCTTAAGCTACTCATGCGACGCCGTCT
TTCGCTCTACTTACACGATAAGTACCTGTCGAACAACACTTTTTACAAAC
TTTCCAATCTCGATGCGCGCATTCGCAACGTTGATCAATTGCTCACTGTG
GACATTGACCGCTTCTGTTCCTCTCTCGTGGACTTGTACTGCAACGTTTC
TAAGCCTTTGTTTGATATTGTTCTTTTCAGTCGCCGCCTGTCGCGCAGTC
TAGGCCCTTCCGGCCCGTTCTGTATGATTCTTTACTTTGCTGCGTGCTCT
GTCATTCTACGCGCAATCCAACCGCCCTTCGGTCAACTCGCAGCTGAGGA
GCAGCGTCTTGAAGGCGAGTATCGTCTGCATCACTCTCGCCTTATTACGC
ACTCAGAGGAAATTGCCTTCTTTGGTGGCGCGGCGCGTGAAAAACTGTAC
ATCAATCATGCATTTGAGAACCTCGTCGCCCATCTGAACAAGTTTTTCGC
AGCTCGTTGGCGCAATGGCTTTGTAGATGCTATCCTTGTCAAGTACGTCG
CCACCATCGTCGGATACCTGGTGGTTTCGCTGCCAGTGTTCTTCACTGAT
TCCGCCATATTCCGTCTATTCTCTTCGACGGGAAGTGGCCGTCACGCCAC
GGCAAATGCCAGCGCGGAGACTACTTCAGCCTCCAATATTGCGGGTTTGT
ACACTAGAAACTCTCGCCTTTTGTTGCAATTGGCCGGGGCCATTGGCAGA
CTTGTACTCGCCGGCTCGGAAGTGACGCGTCTCACTGGGTACACGCATCG
CGTCAGCAGGCTAGAGCATGTGCTGGACGAGCTTTGTCGTGCGGGTGCTG
TGCGTCGTCGCTTCGAATCTTCGTCTGATCTGTTGCACGATGCGCATTTG
GCGCATTTGATGCGGCCAGGAAAATTGGTTGTGGCAGATGAGGGCGACAC
GGAGAGCAGCATACGTTTCGAGTCGGTGAACATCGTTTCGCCAGACGGGA
CGGTTTTGTGCGAGGGGCTTTCACTGGAGATGGAGCGTGGATGTCACGTG
TTGACGACCGGGCCCAATGGGTGTGGCAAGAGCTCGTTGTTCCGCGTGCT
TGCGGGGCTATGGCCGGTGTATGGTGGTACGATTTACCGCCCGGCTCGTT
CGCGTATCTTTTACGTACCGCAGCGGCCGTATCTGGCTATGGGATCGTTG
CGTGAGAATGTGACGTACCCGATGACATGGCCAGAAGCCACGGCACATGG
GGCGACGGATGAAATGATCATGCAGTTGATGGTAAAAGTGCATCTTGGAG
ATGTTGCTCGACGGCGGGACGGGCTAGACGCCGTAAAGGATTGGGCAGAG
GTGTTGAGTGGGGGCCAGAAACAAAGATTAGCGTTTGGGCGGCTGCTGTT
TCATGCGCCACAGTATGCAATTCTTGATGAGGCGTCATCGGCGGTTTCTA
TTGACGTGGAAAAGGCCTTGTATGAGGCAGTGAAGAAGGCAGGCATTACT
GTGATTAGTGTGAGCCATCGTCCGAGCCTTTGGGAGTTTCATGATCGCGT
TCTGGCGTTCGACGGAAGCGGTGGGTACGAGTTTCGAGACATTGGCGACG
AGGATCTGCGCAATTTGGACTCCGCGCAGGGCGGATTTGGAGGAGATGAC
GCTGAAGGCTGA back to topCoding sequence (CDS) from alignment at tig00000010_pilon:1475748..1477859- >Gchil3934.t1 ID=Gchil3934.t1|Name=Gchil3934.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2112bp|location=Sequence derived from alignment at tig00000010_pilon:1475748..1477859- (Gracilaria chilensis NLEC103_M9 male) ATGACCAACGCCTTCTCCGTCCTCGCCCGTCAGCCCCGCGCCGCCCTGGC TGCGGCTGCCGCCGTCGCTGCCACCACTGGCGTGCTCGCCCACAAATGGA ATGCGGCCGTACACAGCAAACGTCTCGACTCTGCTATCTACAGACCCCAC GCACACGCTCCACAGCCTCTCACTGCCGCGTCGCCACCGCCATCGCGAGT GGACCTGCGCTTCGTCAAGACTGTCGCCGCCTTTCTACGAGTTGCCATTC GCGCTCCACCCTCGCAAGAGGCGTCGGTGTTAGCGCTTGTGGCCGCGTTG TTGGCCGCTCGCAGTTGGCTCGACTTGTGGGCCAGCTCAAATGGCGGCCA CGTCGTCAAGGCCATCGTTGCGCGCGACCGCCGCAGCTTCGTGCGTCGTG CCGTTCTGGACATTGTAGTGATGATGTTCCCCATGTCTTTCGTCAACAAT TCGCTTCGATACTCAATAGCGCGTCTTAAGCTACTCATGCGACGCCGTCT TTCGCTCTACTTACACGATAAGTACCTGTCGAACAACACTTTTTACAAAC TTTCCAATCTCGATGCGCGCATTCGCAACGTTGATCAATTGCTCACTGTG GACATTGACCGCTTCTGTTCCTCTCTCGTGGACTTGTACTGCAACGTTTC TAAGCCTTTGTTTGATATTGTTCTTTTCAGTCGCCGCCTGTCGCGCAGTC TAGGCCCTTCCGGCCCGTTCTGTATGATTCTTTACTTTGCTGCGTGCTCT GTCATTCTACGCGCAATCCAACCGCCCTTCGGTCAACTCGCAGCTGAGGA GCAGCGTCTTGAAGGCGAGTATCGTCTGCATCACTCTCGCCTTATTACGC ACTCAGAGGAAATTGCCTTCTTTGGTGGCGCGGCGCGTGAAAAACTGTAC ATCAATCATGCATTTGAGAACCTCGTCGCCCATCTGAACAAGTTTTTCGC AGCTCGTTGGCGCAATGGCTTTGTAGATGCTATCCTTGTCAAGTACGTCG CCACCATCGTCGGATACCTGGTGGTTTCGCTGCCAGTGTTCTTCACTGAT TCCGCCATATTCCGTCTATTCTCTTCGACGGGAAGTGGCCGTCACGCCAC GGCAAATGCCAGCGCGGAGACTACTTCAGCCTCCAATATTGCGGGTTTGT ACACTAGAAACTCTCGCCTTTTGTTGCAATTGGCCGGGGCCATTGGCAGA CTTGTACTCGCCGGCTCGGAAGTGACGCGTCTCACTGGGTACACGCATCG CGTCAGCAGGCTAGAGCATGTGCTGGACGAGCTTTGTCGTGCGGGTGCTG TGCGTCGTCGCTTCGAATCTTCGTCTGATCTGTTGCACGATGCGCATTTG GCGCATTTGATGCGGCCAGGAAAATTGGTTGTGGCAGATGAGGGCGACAC GGAGAGCAGCATACGTTTCGAGTCGGTGAACATCGTTTCGCCAGACGGGA CGGTTTTGTGCGAGGGGCTTTCACTGGAGATGGAGCGTGGATGTCACGTG TTGACGACCGGGCCCAATGGGTGTGGCAAGAGCTCGTTGTTCCGCGTGCT TGCGGGGCTATGGCCGGTGTATGGTGGTACGATTTACCGCCCGGCTCGTT CGCGTATCTTTTACGTACCGCAGCGGCCGTATCTGGCTATGGGATCGTTG CGTGAGAATGTGACGTACCCGATGACATGGCCAGAAGCCACGGCACATGG GGCGACGGATGAAATGATCATGCAGTTGATGGTAAAAGTGCATCTTGGAG ATGTTGCTCGACGGCGGGACGGGCTAGACGCCGTAAAGGATTGGGCAGAG GTGTTGAGTGGGGGCCAGAAACAAAGATTAGCGTTTGGGCGGCTGCTGTT TCATGCGCCACAGTATGCAATTCTTGATGAGGCGTCATCGGCGGTTTCTA TTGACGTGGAAAAGGCCTTGTATGAGGCAGTGAAGAAGGCAGGCATTACT GTGATTAGTGTGAGCCATCGTCCGAGCCTTTGGGAGTTTCATGATCGCGT TCTGGCGTTCGACGGAAGCGGTGGGTACGAGTTTCGAGACATTGGCGACG AGGATCTGCGCAATTTGGACTCCGCGCAGGGCGGATTTGGAGGAGATGAC GCTGAAGGCTGA back to top
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