Gchil3160.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3160.t1
Unique NameGchil3160.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length391
Homology
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A2V3IF09_9FLOR (Protein SIP5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF09_9FLOR)

HSP 1 Score: 265 bits (677), Expect = 6.310e-82
Identity = 190/416 (45.67%), Postives = 236/416 (56.73%), Query Frame = 0
Query:    1 MGNTSSVSLRLRRRRIDDPAALDLPF-KSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRANANTLCANSALALPSPPTLPSPAYSSQLVSSSSVTPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSARATS---SPVSD--------------LISVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--QTCTQHRAPVFVSSFQQNATESIALETAVNDVNYVPTPACENKHPSPVAVQ-RTAQQQNGQGESSDVGSNHSAHHTADHNAQTPDPLSRQCFPSRQSAT-----NSSLHFNEEFEEECVAMHEAIRRSLLDI 390
            MGN+SSV LRLRRRR ++P+ +DL + KSSGLYPTC+WDDK VRRLILRG+LAPRYPG+DDP+  VREECPICML+YPVLNQTKCC ARLCTECYLQIRPPRHNKEPCPFCKYKRL+ATC+GPR A DLDREE +Q +AL+AIKRA+A  L A+ A  L + P  P+P  SS  V+     P                  XXXXXXXXX      + R T    SPV D              +I               XXXX                 P  +TC+++    FV ++Q    + + LET   +  Y  T   +N  PS + V  R+A+Q       S V S+     T+D   Q P  L      + QS       +SSL F++E  +    M EAIRRSL+++
Sbjct:    1 MGNSSSVPLRLRRRRYEEPSPIDLLYTKSSGLYPTCSWDDKHVRRLILRGELAPRYPGKDDPTSTVREECPICMLIYPVLNQTKCCSARLCTECYLQIRPPRHNKEPCPFCKYKRLEATCKGPRSADDLDREERDQISALEAIKRASAAALSADPARNLITAPPRPTP--SSATVNVQVAQPVSSSQSAYRPAAQTTASFXXXXXXXXXSTLHMHTPRETDPVMSPVYDAYTPYHYSAASSHHIIPSDSTTSPPSVLATAXXXXSSPSLPTPSTSSSHQRCPDARTCSENHRTHFVPAYQPTNADPLVLETMATEATYYAT--SDNDKPSSLRVLLRSAEQ------GSSVVSDPPC--TSDEAPQLPAVLHLPWHDTDQSVNTTAGPSSSLQFSQEHAD----MDEAIRRSLIEM 400          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S1TCU7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCU7_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 4.990e-38
Identity = 71/146 (48.63%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    1 MGNTSSVSLRLRRRRIDDPAALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPR-HNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRA 145
            MGN +S S + R +   D  AL    K++GLYP C W ++LVRRLILRG +APRYPG D+P+   R+EC IC L YP+LN T CC  ++CTEC+LQIRPP+ H+ E CPFCK    D + +GP+ +     EE+E+   ++A + A
Sbjct:    1 MGNATSRSGKPRVQ--SDLDALSFS-KATGLYPYCPWSERLVRRLILRGRVAPRYPGADEPTEVQRDECLICFLYYPMLNSTVCCGKQICTECFLQIRPPKLHHSEDCPFCKTPSFDISFKGPKSSEQRRMEELEEQRVMRAWEAA 143          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A6U3TUJ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TUJ3_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.400e-27
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
Query:   20 AALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRANANT 149
            A L+   K SGLYP+C W+++ +RR I  G LA R  G D  +    +ECPIC L Y  +N T CC A +CTECYLQIRP +    PCPFC + ++  T     +  D++  E E+   ++A  RA ANT
Sbjct:   56 AELERRCKPSGLYPSCKWEERAIRRQIADGKLAARLGGSDIRTLPTDQECPICFLHYTEINTTSCCHATVCTECYLQIRPQKEKHVPCPFCNFAKVAVTVAKRMEVKDVEEREKEEQVVIEAKIRARANT 185          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S2W902_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W902_9STRA)

HSP 1 Score: 113 bits (282), Expect = 6.240e-27
Identity = 48/120 (40.00%), Postives = 69/120 (57.50%), Query Frame = 0
Query:   27 KSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRAN 146
            K SG+YP+C W+D+ +RRL+  G L+ R  G D  S     ECPIC L Y   N T CCQA +CTECYLQ+RP +     CPFC + +L        +  D+ +   E+   ++A+ +A+
Sbjct:    1 KPSGIYPSCQWEDRAIRRLVGDGKLSARLTGNDTRSTGADRECPICFLHYSQTNVTSCCQAYICTECYLQVRPQKEKHSSCPFCNHYKLAVRVAKDMNNEDITKRNEEEQCVIEAMIKAS 120          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S2IDW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IDW8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.160e-26
Identity = 57/130 (43.85%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   20 AALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRANANT 149
            A L+   K SGLYP+C WD++ +RRLI  G LA R  G D  S    +ECPIC L Y  +N T CC A +CTECYLQIRP +     CPFC   ++        D+ D+ + + E+   ++A  RA ANT
Sbjct:   59 AELEQRCKPSGLYPSCKWDERGIRRLIGDGKLAARLGGSDVRSNPTDQECPICFLHYSEINITNCCSATVCTECYLQIRPQKERAVTCPFCNNPKITVVVAKTMDSEDIQKRDHEEQAVIEAKIRARANT 188          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S1ZV48_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZV48_TRICV)

HSP 1 Score: 114 bits (286), Expect = 1.750e-26
Identity = 55/126 (43.65%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   20 AALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRA 145
            A LD     SGLY +C W+DK +RRLI  G LA R  G D  +     ECPIC L Y  +N T CC+A LCTECYLQ+RP R    PCPFC   ++  T       +D+ + + E+   ++A  RA
Sbjct:   68 AELDRRCVPSGLYESCQWEDKAIRRLIGDGKLAARLKGNDSRTNPGDRECPICFLHYSQVNLTTCCKAALCTECYLQVRPQRQKDCPCPFCNRPKVTITVAEDMRGSDVTKRDREEQKVIEAQIRA 193          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S3LG82_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG82_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.060e-26
Identity = 60/126 (47.62%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   20 AALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRA 145
            A LD   K SGLYP C WDDK +RRLI  G LA R  GE+        ECPIC L Y  +NQTKCCQ  LCTECYLQ+RPP+  K  CPFC    L  T +       +   + E+  AL A  ++
Sbjct:   40 AELDARCKPSGLYPNCQWDDKQIRRLIGDGKLAARLKGEEVRRKETDTECPICFLNYAQVNQTKCCQGSLCTECYLQVRPPKE-KVACPFCNSSNLVVTLQQTLSQESIRERQEEEERALAAATKS 164          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7R9UGC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGC3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.040e-26
Identity = 59/135 (43.70%), Postives = 83/135 (61.48%), Query Frame = 0
Query:    1 MGNTSSVSLRLR---RRRIDDPAALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREE 132
            MGN++     LR   R+   DP  L+   + +GLYP+C+WD ++VRR IL G LAPR  G D P+    +ECPIC   Y  +N T CC+  +CTECYLQ++PPR +K  CPFC  +   AT   P++ A+  +E+
Sbjct:    1 MGNSALRGQPLRGGKRQGRPDPQ-LEAFCRPTGLYPSCSWDVRVVRRAILNGKLAPRMKGTDAPASLSDDECPICFFYYGKVNTTTCCKQPICTECYLQVKPPREDKA-CPFCNRECFSATYL-PKERAEDAKED 132          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S2Y3Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y3Q9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.230e-26
Identity = 54/128 (42.19%), Postives = 74/128 (57.81%), Query Frame = 0
Query:   20 AALDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRANA 147
            A LD   + +GLY +C WD K +RRLI  G LA R  G +D   +   ECPIC   Y  +N+TKCCQA +CTECYLQ+R P+ +   CPFC  K L  T   P     ++  + E+   ++A  RA++
Sbjct:   43 AELDARCQPTGLYSSCPWDYKQIRRLIGDGKLAARVKGTEDRESDGDSECPICFFYYSAVNKTKCCQAFICTECYLQVRNPKESSTACPFCNQKLL-VTMSQPLSEEAIEERKAEEQKTIEAKIRASS 169          
BLAST of Gchil3160.t1 vs. uniprot
Match: A0A7S3Q341_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q341_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.590e-25
Identity = 50/132 (37.88%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   22 LDLPFKSSGLYPTCNWDDKLVRRLILRGDLAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPPRHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRANANTLCAN 153
            LD+  K SGLY +C+WDDK++RRL+  GD+A R  G D  + +  +ECPIC L Y  +N   CC+A +C+ECYLQI+ PR    PCPFC   +++       +  ++ + + E+   ++A  ++    L  N
Sbjct:   40 LDIRCKPSGLYDSCSWDDKVIRRLVSDGDIAARLEGTDSRTQSTDQECPICFLHYTDINLLSCCKATICSECYLQIQDPRAIDTPCPFCNQPKMEVKIAKRLEIDEVSKRDEEEQRIIEAKIKSKIEGLSGN 171          
The following BLAST results are available for this feature:
BLAST of Gchil3160.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IF09_9FLOR6.310e-8245.67Protein SIP5 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A7S1TCU7_9RHOD4.990e-3848.63Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6U3TUJ3_9STRA5.400e-2743.08Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2W902_9STRA6.240e-2740.00Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2IDW8_9STRA1.160e-2643.85Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1ZV48_TRICV1.750e-2643.65Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S3LG82_9STRA2.060e-2647.62Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A7R9UGC3_9STRA3.040e-2643.70Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2Y3Q9_9STRA8.230e-2642.19Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S3Q341_9STRA4.590e-2537.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..358
NoneNo IPR availablePANTHERPTHR31315:SF1PROTEIN SIP5coord: 1..144
IPR039301Protein Sip5/DA2PANTHERPTHR31315PROTEIN SIP5coord: 1..144
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 69..111
score: 8.520721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:583430..584602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3160.t1Gchil3160.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 583430..584602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3160.t1 ID=Gchil3160.t1|Name=Gchil3160.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=391bp
MGNTSSVSLRLRRRRIDDPAALDLPFKSSGLYPTCNWDDKLVRRLILRGD
LAPRYPGEDDPSPNVREECPICMLVYPVLNQTKCCQARLCTECYLQIRPP
RHNKEPCPFCKYKRLDATCRGPRDAADLDREEMEQHNALQAIKRANANTL
CANSALALPSPPTLPSPAYSSQLVSSSSVTPAVPSSSSASSPSLVQPSVS
TSSFSPTTESSGTVSARATSSPVSDLISVPSSSLVATVSSSVSESSTSTT
DHPAQPSPEHNQQPQTCTQHRAPVFVSSFQQNATESIALETAVNDVNYVP
TPACENKHPSPVAVQRTAQQQNGQGESSDVGSNHSAHHTADHNAQTPDPL
SRQCFPSRQSATNSSLHFNEEFEEECVAMHEAIRRSLLDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039301Sip5/DA2
IPR001841Znf_RING