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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 643473.KB235930_gene4284 |
| PFAMs | Dala_Dala_lig_C |
| Max annot lvl | 1117|Cyanobacteria |
| KEGG rclass | RC00064,RC00141 |
| KEGG ko | ko:K01921 |
| KEGG Reaction | R01150 |
| KEGG Pathway | ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 |
| Evalue | 7.15e-66 |
| EggNOG OGs | COG1181@1|root,COG1181@2|Bacteria,1G1R5@1117|Cyanobacteria,1HM66@1161|Nostocales |
| EC | 6.3.2.4 |
| Description | Belongs to the D-alanine--D-alanine ligase family |
| COG category | M |
| BRITE | ko00000,ko00001,ko01000,ko01011 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3136.t1 ID=Gchil3136.t1|Name=Gchil3136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=923bp MVIIHSNQTVLTLSSSLISWIVHLLWTILVFFKTFLKRLERFRSGKELGS PRYGGVARGKTVLVTTGRQAKTLHTVRALKEIGATVIVTDYHFVSASALS LACDKFLVLPPLDTDKIQPWIQSFRHVLVENNVDMVLPVSTINEVLFLAL AKHQLESELPHIQWVCPDLEVALRLDDRAQFSNLCEKNEVSVPESGLLTS TDGINQLSKAYEHGIILKRVQSSVNRREEIVHIGPEDVVPNLIQPSLADP WQWQRFIVGKEYSVWYVCINGCVTFTGCYHAEPDLLHFDPAPVDKHLDKT LRNMIKRLNLTGQFAFDFIQVENTGRSFVIECNPRASSILETVSNTPLWA ESFFGVDVTKRTVYSNVGFLFHRNCWPWTSRCEGYCSFYDPLPFFGAEVV WPLNAIATKGLTKKSWRKIDVNICKIILDGNSASRGIEVFRENLARTQID FALQSIRHIDTLFLDVTVPDFNTVFKKCEGMGVKMILLRDEYIAAPPDLG HVCDVDVVRNGNITDKFLAQHIQGETRILLGSKLSQLTNSSSDISYRTVK IGEPWNVRNEIPLRRLRILHVMGSSVNEFYETLSTRYGYDCIENVGTDGR FEHVVVQVSPSRGWSVEPFVSESYILNNGKWISPGQALMKIEKLGVDIVL PHMYDYEGMTAVRSVFDILKIPLLGCTADALALSTNKARTNACARAAGVR VPDFEVLKKGEKPTLTLPFVIKPSEEDNSQGITVVYEPERIDDALHHAFQ FCEDVMCEEFIAPGREVRVAVVEEGDESLEMLPVIEYFITPSDPVRTTAH KLDTTKTGTITKLKGGAPGGVTLPASIDPALHNKLYQMVTTAHKSLGCRD YSIYDIRIDPDGEPVLLETCLYCSFAPTSVLVKMQAAMGIDKRQLFNRLC EKALTRRILRKSSHSTGMKLRH* back to topspliced messenger RNA >Gchil3136.t1 ID=Gchil3136.t1|Name=Gchil3136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2769bp|location=Sequence derived from alignment at tig00004382_pilon:418513..421281- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGATCATACACTCAAATCAGACTGTGCTCACTCTCTCCTCTTCATT GATAAGTTGGATTGTACACTTGCTGTGGACTATCCTCGTCTTCTTCAAGA CATTCTTAAAACGCCTCGAACGATTTCGGTCTGGAAAAGAATTGGGGAGT CCTCGCTACGGTGGTGTCGCAAGGGGCAAGACCGTGCTTGTGACCACGGG CCGTCAAGCCAAGACACTACACACTGTGCGAGCTTTGAAAGAAATCGGTG CAACTGTTATCGTAACAGACTATCACTTTGTCAGTGCATCTGCCTTAAGT CTCGCCTGTGACAAATTTCTTGTACTACCTCCATTGGACACAGACAAGAT CCAACCGTGGATCCAAAGCTTTCGACATGTCCTGGTCGAGAACAACGTTG ATATGGTTCTCCCGGTTAGCACTATCAACGAGGTGCTTTTCCTTGCACTA GCAAAGCACCAATTAGAAAGTGAGCTACCTCACATTCAATGGGTTTGTCC AGATCTTGAAGTGGCTCTGAGACTCGATGACAGAGCTCAGTTCTCAAATC TATGTGAAAAGAATGAAGTTTCTGTACCGGAAAGCGGCTTGCTTACATCG ACAGATGGCATAAACCAACTATCTAAAGCATACGAGCATGGCATCATATT GAAGCGTGTACAATCCTCCGTGAACCGTCGAGAAGAAATAGTGCATATCG GACCCGAGGACGTAGTACCAAACTTAATTCAGCCCTCTCTAGCAGATCCC TGGCAATGGCAACGTTTTATTGTCGGAAAAGAATACTCGGTGTGGTACGT TTGTATAAATGGTTGTGTGACCTTCACCGGTTGCTACCATGCAGAGCCAG ATCTCTTGCATTTCGATCCTGCACCTGTCGACAAACACTTGGATAAAACA CTTCGGAATATGATCAAAAGACTAAATCTCACCGGACAATTCGCGTTTGA CTTCATTCAAGTCGAGAACACGGGGCGAAGTTTCGTCATAGAATGCAACC CTAGAGCTTCGTCAATCCTAGAAACTGTCTCAAACACACCCTTATGGGCT GAATCTTTCTTCGGTGTGGACGTTACGAAACGAACTGTGTACAGCAATGT GGGATTCTTGTTCCATCGTAATTGCTGGCCATGGACCTCTCGATGTGAAG GTTACTGCAGTTTCTACGATCCCCTTCCTTTCTTCGGTGCGGAAGTGGTG TGGCCCCTGAATGCCATTGCTACGAAAGGATTGACCAAGAAATCTTGGCG TAAGATAGATGTCAACATTTGCAAAATCATTCTAGATGGGAACTCTGCAA GTCGGGGCATCGAAGTTTTCCGTGAGAATTTGGCCAGAACCCAAATAGAC TTCGCTCTGCAGTCAATACGGCACATAGACACTCTGTTCCTCGATGTTAC CGTTCCCGATTTCAATACGGTCTTCAAGAAGTGTGAAGGAATGGGTGTGA AAATGATCTTGCTTCGTGATGAGTATATCGCGGCGCCGCCAGACCTTGGG CATGTGTGTGATGTTGACGTTGTACGAAATGGAAACATTACTGATAAATT CCTAGCCCAACACATCCAAGGAGAAACTCGGATTCTGCTTGGGTCGAAAT TGTCACAACTCACCAACTCTTCGTCCGACATTTCTTACCGTACTGTGAAG ATTGGAGAACCTTGGAACGTCAGAAATGAAATACCCCTTCGAAGATTGCG CATACTTCATGTTATGGGATCGTCGGTGAATGAATTTTATGAAACCCTTT CAACGAGATACGGATACGATTGCATAGAAAATGTTGGTACGGATGGACGA TTTGAACATGTTGTCGTTCAGGTAAGCCCATCCCGTGGTTGGAGTGTGGA GCCCTTCGTAAGTGAATCCTACATCTTAAACAACGGGAAGTGGATTTCTC CTGGCCAAGCATTGATGAAGATAGAGAAACTTGGTGTTGACATTGTCCTT CCTCACATGTACGATTATGAAGGGATGACTGCAGTGCGTTCCGTTTTTGA TATCTTGAAGATACCATTACTCGGCTGTACTGCCGATGCACTTGCACTTT CCACGAATAAAGCGCGGACGAATGCATGTGCACGTGCCGCCGGGGTACGG GTACCAGACTTCGAAGTCCTCAAGAAGGGAGAGAAACCAACTTTGACCCT GCCGTTTGTTATAAAGCCAAGTGAGGAAGACAATTCACAAGGGATAACAG TTGTGTACGAACCTGAAAGAATTGATGACGCCCTACATCATGCGTTTCAG TTTTGCGAAGATGTGATGTGCGAAGAATTCATTGCACCAGGACGAGAGGT GCGAGTAGCTGTTGTCGAAGAAGGTGACGAAAGTTTGGAAATGCTCCCGG TTATTGAATACTTTATTACACCCTCCGATCCGGTTAGGACCACGGCGCAC AAGCTAGATACGACGAAAACAGGAACTATCACGAAATTGAAAGGTGGCGC TCCCGGTGGCGTTACTCTTCCAGCATCTATCGATCCTGCTCTTCACAACA AACTGTATCAAATGGTGACAACTGCACACAAATCGCTGGGATGCCGGGAT TACAGTATCTACGATATTCGCATTGATCCCGATGGTGAGCCAGTTTTGCT AGAGACGTGTTTATACTGTTCATTCGCTCCAACAAGCGTATTAGTCAAGA TGCAAGCAGCCATGGGAATTGACAAACGCCAACTTTTCAACCGTCTGTGT GAGAAGGCGTTGACGAGGAGAATACTCCGTAAATCATCCCACAGCACTGG AATGAAATTGCGCCACTAA back to topprotein sequence of Gchil3136.t1 >Gchil3136.t1 ID=Gchil3136.t1|Name=Gchil3136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=923bp
MVIIHSNQTVLTLSSSLISWIVHLLWTILVFFKTFLKRLERFRSGKELGS PRYGGVARGKTVLVTTGRQAKTLHTVRALKEIGATVIVTDYHFVSASALS LACDKFLVLPPLDTDKIQPWIQSFRHVLVENNVDMVLPVSTINEVLFLAL AKHQLESELPHIQWVCPDLEVALRLDDRAQFSNLCEKNEVSVPESGLLTS TDGINQLSKAYEHGIILKRVQSSVNRREEIVHIGPEDVVPNLIQPSLADP WQWQRFIVGKEYSVWYVCINGCVTFTGCYHAEPDLLHFDPAPVDKHLDKT LRNMIKRLNLTGQFAFDFIQVENTGRSFVIECNPRASSILETVSNTPLWA ESFFGVDVTKRTVYSNVGFLFHRNCWPWTSRCEGYCSFYDPLPFFGAEVV WPLNAIATKGLTKKSWRKIDVNICKIILDGNSASRGIEVFRENLARTQID FALQSIRHIDTLFLDVTVPDFNTVFKKCEGMGVKMILLRDEYIAAPPDLG HVCDVDVVRNGNITDKFLAQHIQGETRILLGSKLSQLTNSSSDISYRTVK IGEPWNVRNEIPLRRLRILHVMGSSVNEFYETLSTRYGYDCIENVGTDGR FEHVVVQVSPSRGWSVEPFVSESYILNNGKWISPGQALMKIEKLGVDIVL PHMYDYEGMTAVRSVFDILKIPLLGCTADALALSTNKARTNACARAAGVR VPDFEVLKKGEKPTLTLPFVIKPSEEDNSQGITVVYEPERIDDALHHAFQ FCEDVMCEEFIAPGREVRVAVVEEGDESLEMLPVIEYFITPSDPVRTTAH KLDTTKTGTITKLKGGAPGGVTLPASIDPALHNKLYQMVTTAHKSLGCRD YSIYDIRIDPDGEPVLLETCLYCSFAPTSVLVKMQAAMGIDKRQLFNRLC EKALTRRILRKSSHSTGMKLRH* back to topmRNA from alignment at tig00004382_pilon:418513..421281- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3136.t1 ID=Gchil3136.t1|Name=Gchil3136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2769bp|location=Sequence derived from alignment at tig00004382_pilon:418513..421281- (Gracilaria chilensis NLEC103_M9 male) ATGGTGATCATACACTCAAATCAGACTGTGCTCACTCTCTCCTCTTCATT
GATAAGTTGGATTGTACACTTGCTGTGGACTATCCTCGTCTTCTTCAAGA
CATTCTTAAAACGCCTCGAACGATTTCGGTCTGGAAAAGAATTGGGGAGT
CCTCGCTACGGTGGTGTCGCAAGGGGCAAGACCGTGCTTGTGACCACGGG
CCGTCAAGCCAAGACACTACACACTGTGCGAGCTTTGAAAGAAATCGGTG
CAACTGTTATCGTAACAGACTATCACTTTGTCAGTGCATCTGCCTTAAGT
CTCGCCTGTGACAAATTTCTTGTACTACCTCCATTGGACACAGACAAGAT
CCAACCGTGGATCCAAAGCTTTCGACATGTCCTGGTCGAGAACAACGTTG
ATATGGTTCTCCCGGTTAGCACTATCAACGAGGTGCTTTTCCTTGCACTA
GCAAAGCACCAATTAGAAAGTGAGCTACCTCACATTCAATGGGTTTGTCC
AGATCTTGAAGTGGCTCTGAGACTCGATGACAGAGCTCAGTTCTCAAATC
TATGTGAAAAGAATGAAGTTTCTGTACCGGAAAGCGGCTTGCTTACATCG
ACAGATGGCATAAACCAACTATCTAAAGCATACGAGCATGGCATCATATT
GAAGCGTGTACAATCCTCCGTGAACCGTCGAGAAGAAATAGTGCATATCG
GACCCGAGGACGTAGTACCAAACTTAATTCAGCCCTCTCTAGCAGATCCC
TGGCAATGGCAACGTTTTATTGTCGGAAAAGAATACTCGGTGTGGTACGT
TTGTATAAATGGTTGTGTGACCTTCACCGGTTGCTACCATGCAGAGCCAG
ATCTCTTGCATTTCGATCCTGCACCTGTCGACAAACACTTGGATAAAACA
CTTCGGAATATGATCAAAAGACTAAATCTCACCGGACAATTCGCGTTTGA
CTTCATTCAAGTCGAGAACACGGGGCGAAGTTTCGTCATAGAATGCAACC
CTAGAGCTTCGTCAATCCTAGAAACTGTCTCAAACACACCCTTATGGGCT
GAATCTTTCTTCGGTGTGGACGTTACGAAACGAACTGTGTACAGCAATGT
GGGATTCTTGTTCCATCGTAATTGCTGGCCATGGACCTCTCGATGTGAAG
GTTACTGCAGTTTCTACGATCCCCTTCCTTTCTTCGGTGCGGAAGTGGTG
TGGCCCCTGAATGCCATTGCTACGAAAGGATTGACCAAGAAATCTTGGCG
TAAGATAGATGTCAACATTTGCAAAATCATTCTAGATGGGAACTCTGCAA
GTCGGGGCATCGAAGTTTTCCGTGAGAATTTGGCCAGAACCCAAATAGAC
TTCGCTCTGCAGTCAATACGGCACATAGACACTCTGTTCCTCGATGTTAC
CGTTCCCGATTTCAATACGGTCTTCAAGAAGTGTGAAGGAATGGGTGTGA
AAATGATCTTGCTTCGTGATGAGTATATCGCGGCGCCGCCAGACCTTGGG
CATGTGTGTGATGTTGACGTTGTACGAAATGGAAACATTACTGATAAATT
CCTAGCCCAACACATCCAAGGAGAAACTCGGATTCTGCTTGGGTCGAAAT
TGTCACAACTCACCAACTCTTCGTCCGACATTTCTTACCGTACTGTGAAG
ATTGGAGAACCTTGGAACGTCAGAAATGAAATACCCCTTCGAAGATTGCG
CATACTTCATGTTATGGGATCGTCGGTGAATGAATTTTATGAAACCCTTT
CAACGAGATACGGATACGATTGCATAGAAAATGTTGGTACGGATGGACGA
TTTGAACATGTTGTCGTTCAGGTAAGCCCATCCCGTGGTTGGAGTGTGGA
GCCCTTCGTAAGTGAATCCTACATCTTAAACAACGGGAAGTGGATTTCTC
CTGGCCAAGCATTGATGAAGATAGAGAAACTTGGTGTTGACATTGTCCTT
CCTCACATGTACGATTATGAAGGGATGACTGCAGTGCGTTCCGTTTTTGA
TATCTTGAAGATACCATTACTCGGCTGTACTGCCGATGCACTTGCACTTT
CCACGAATAAAGCGCGGACGAATGCATGTGCACGTGCCGCCGGGGTACGG
GTACCAGACTTCGAAGTCCTCAAGAAGGGAGAGAAACCAACTTTGACCCT
GCCGTTTGTTATAAAGCCAAGTGAGGAAGACAATTCACAAGGGATAACAG
TTGTGTACGAACCTGAAAGAATTGATGACGCCCTACATCATGCGTTTCAG
TTTTGCGAAGATGTGATGTGCGAAGAATTCATTGCACCAGGACGAGAGGT
GCGAGTAGCTGTTGTCGAAGAAGGTGACGAAAGTTTGGAAATGCTCCCGG
TTATTGAATACTTTATTACACCCTCCGATCCGGTTAGGACCACGGCGCAC
AAGCTAGATACGACGAAAACAGGAACTATCACGAAATTGAAAGGTGGCGC
TCCCGGTGGCGTTACTCTTCCAGCATCTATCGATCCTGCTCTTCACAACA
AACTGTATCAAATGGTGACAACTGCACACAAATCGCTGGGATGCCGGGAT
TACAGTATCTACGATATTCGCATTGATCCCGATGGTGAGCCAGTTTTGCT
AGAGACGTGTTTATACTGTTCATTCGCTCCAACAAGCGTATTAGTCAAGA
TGCAAGCAGCCATGGGAATTGACAAACGCCAACTTTTCAACCGTCTGTGT
GAGAAGGCGTTGACGAGGAGAATACTCCGTAAATCATCCCACAGCACTGG
AATGAAATTGCGCCACTAA back to topCoding sequence (CDS) from alignment at tig00004382_pilon:418513..421281- >Gchil3136.t1 ID=Gchil3136.t1|Name=Gchil3136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2769bp|location=Sequence derived from alignment at tig00004382_pilon:418513..421281- (Gracilaria chilensis NLEC103_M9 male) ATGGTGATCATACACTCAAATCAGACTGTGCTCACTCTCTCCTCTTCATT GATAAGTTGGATTGTACACTTGCTGTGGACTATCCTCGTCTTCTTCAAGA CATTCTTAAAACGCCTCGAACGATTTCGGTCTGGAAAAGAATTGGGGAGT CCTCGCTACGGTGGTGTCGCAAGGGGCAAGACCGTGCTTGTGACCACGGG CCGTCAAGCCAAGACACTACACACTGTGCGAGCTTTGAAAGAAATCGGTG CAACTGTTATCGTAACAGACTATCACTTTGTCAGTGCATCTGCCTTAAGT CTCGCCTGTGACAAATTTCTTGTACTACCTCCATTGGACACAGACAAGAT CCAACCGTGGATCCAAAGCTTTCGACATGTCCTGGTCGAGAACAACGTTG ATATGGTTCTCCCGGTTAGCACTATCAACGAGGTGCTTTTCCTTGCACTA GCAAAGCACCAATTAGAAAGTGAGCTACCTCACATTCAATGGGTTTGTCC AGATCTTGAAGTGGCTCTGAGACTCGATGACAGAGCTCAGTTCTCAAATC TATGTGAAAAGAATGAAGTTTCTGTACCGGAAAGCGGCTTGCTTACATCG ACAGATGGCATAAACCAACTATCTAAAGCATACGAGCATGGCATCATATT GAAGCGTGTACAATCCTCCGTGAACCGTCGAGAAGAAATAGTGCATATCG GACCCGAGGACGTAGTACCAAACTTAATTCAGCCCTCTCTAGCAGATCCC TGGCAATGGCAACGTTTTATTGTCGGAAAAGAATACTCGGTGTGGTACGT TTGTATAAATGGTTGTGTGACCTTCACCGGTTGCTACCATGCAGAGCCAG ATCTCTTGCATTTCGATCCTGCACCTGTCGACAAACACTTGGATAAAACA CTTCGGAATATGATCAAAAGACTAAATCTCACCGGACAATTCGCGTTTGA CTTCATTCAAGTCGAGAACACGGGGCGAAGTTTCGTCATAGAATGCAACC CTAGAGCTTCGTCAATCCTAGAAACTGTCTCAAACACACCCTTATGGGCT GAATCTTTCTTCGGTGTGGACGTTACGAAACGAACTGTGTACAGCAATGT GGGATTCTTGTTCCATCGTAATTGCTGGCCATGGACCTCTCGATGTGAAG GTTACTGCAGTTTCTACGATCCCCTTCCTTTCTTCGGTGCGGAAGTGGTG TGGCCCCTGAATGCCATTGCTACGAAAGGATTGACCAAGAAATCTTGGCG TAAGATAGATGTCAACATTTGCAAAATCATTCTAGATGGGAACTCTGCAA GTCGGGGCATCGAAGTTTTCCGTGAGAATTTGGCCAGAACCCAAATAGAC TTCGCTCTGCAGTCAATACGGCACATAGACACTCTGTTCCTCGATGTTAC CGTTCCCGATTTCAATACGGTCTTCAAGAAGTGTGAAGGAATGGGTGTGA AAATGATCTTGCTTCGTGATGAGTATATCGCGGCGCCGCCAGACCTTGGG CATGTGTGTGATGTTGACGTTGTACGAAATGGAAACATTACTGATAAATT CCTAGCCCAACACATCCAAGGAGAAACTCGGATTCTGCTTGGGTCGAAAT TGTCACAACTCACCAACTCTTCGTCCGACATTTCTTACCGTACTGTGAAG ATTGGAGAACCTTGGAACGTCAGAAATGAAATACCCCTTCGAAGATTGCG CATACTTCATGTTATGGGATCGTCGGTGAATGAATTTTATGAAACCCTTT CAACGAGATACGGATACGATTGCATAGAAAATGTTGGTACGGATGGACGA TTTGAACATGTTGTCGTTCAGGTAAGCCCATCCCGTGGTTGGAGTGTGGA GCCCTTCGTAAGTGAATCCTACATCTTAAACAACGGGAAGTGGATTTCTC CTGGCCAAGCATTGATGAAGATAGAGAAACTTGGTGTTGACATTGTCCTT CCTCACATGTACGATTATGAAGGGATGACTGCAGTGCGTTCCGTTTTTGA TATCTTGAAGATACCATTACTCGGCTGTACTGCCGATGCACTTGCACTTT CCACGAATAAAGCGCGGACGAATGCATGTGCACGTGCCGCCGGGGTACGG GTACCAGACTTCGAAGTCCTCAAGAAGGGAGAGAAACCAACTTTGACCCT GCCGTTTGTTATAAAGCCAAGTGAGGAAGACAATTCACAAGGGATAACAG TTGTGTACGAACCTGAAAGAATTGATGACGCCCTACATCATGCGTTTCAG TTTTGCGAAGATGTGATGTGCGAAGAATTCATTGCACCAGGACGAGAGGT GCGAGTAGCTGTTGTCGAAGAAGGTGACGAAAGTTTGGAAATGCTCCCGG TTATTGAATACTTTATTACACCCTCCGATCCGGTTAGGACCACGGCGCAC AAGCTAGATACGACGAAAACAGGAACTATCACGAAATTGAAAGGTGGCGC TCCCGGTGGCGTTACTCTTCCAGCATCTATCGATCCTGCTCTTCACAACA AACTGTATCAAATGGTGACAACTGCACACAAATCGCTGGGATGCCGGGAT TACAGTATCTACGATATTCGCATTGATCCCGATGGTGAGCCAGTTTTGCT AGAGACGTGTTTATACTGTTCATTCGCTCCAACAAGCGTATTAGTCAAGA TGCAAGCAGCCATGGGAATTGACAAACGCCAACTTTTCAACCGTCTGTGT GAGAAGGCGTTGACGAGGAGAATACTCCGTAAATCATCCCACAGCACTGG AATGAAATTGCGCCACTAA back to top
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