Gchil605.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil605.t1
Unique NameGchil605.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length116
Homology
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BLAST of Gchil605.t1 vs. uniprot
Match: A0A2V3IZZ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZZ1_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 3.520e-22
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:   10 PHERFRIVIPSAA----QADFSCGDWWLRARCCNGTEAIPLVTSVYYTCSCQPDGMTSRGLAVI 69
            PH+  R  +P  A    QADFSCGDWWLRA CCNGT+ IPLVTS Y+TCSC+  GMT+RGL VI
Sbjct:   27 PHQCARTCVPFHAGTPKQADFSCGDWWLRANCCNGTDPIPLVTSTYFTCSCETLGMTTRGLVVI 90
The following BLAST results are available for this feature:
BLAST of Gchil605.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZZ1_9FLOR3.520e-2265.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..66
NoneNo IPR availableTMHMMTMhelixcoord: 66..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:576805..577535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil605.t1Gchil605.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 576805..577535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil605.t1 ID=Gchil605.t1|Name=Gchil605.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=116bp
MADDRCCGPPHERFRIVIPSAAQADFSCGDWWLRARCCNGTEAIPLVTSV
YYTCSCQPDGMTSRGLAVILVLAFAAISVVLAAVAYVLYRQKKRAKAEEE
EHDRAIEEAQVYLPR*
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