Gchil565.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil565.t1
Unique NameGchil565.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length161
Homology
BLAST of Gchil565.t1 vs. uniprot
Match: A0A2V3J0Z0_9FLOR (Signal peptidase complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z0_9FLOR)

HSP 1 Score: 283 bits (725), Expect = 5.910e-96
Identity = 134/159 (84.28%), Postives = 148/159 (93.08%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVDLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLFYGEQ 159
            MHAIGPR+NVFFTHLMTM FVLVAIGSSFSY+QLR SSP VDL+M+EM FLRQL RE+CDQAYI+FD++ADFR MWSWNINHMYVYVVAEY+S TH+RNEVVVWD+ILSGR+D LIA+KGQYNKYSLKDHGYGLRN  VTLK KYNILPYMGPLFYGE+
Sbjct:    1 MHAIGPRVNVFFTHLMTMTFVLVAIGSSFSYMQLRKSSPIVDLRMSEMSFLRQLQREKCDQAYIKFDLDADFRKMWSWNINHMYVYVVAEYQSSTHTRNEVVVWDSILSGRQDALIARKGQYNKYSLKDHGYGLRNTPVTLKFKYNILPYMGPLFYGEE 159          
BLAST of Gchil565.t1 vs. uniprot
Match: S0F3W6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3W6_CHOCR)

HSP 1 Score: 250 bits (638), Expect = 1.030e-82
Identity = 114/159 (71.70%), Postives = 138/159 (86.79%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVDLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLFYGEQ 159
            MHA+GPR+NVFFTHLMTM+ VLVAI SSFSY QL ++SP+VDL+++++ FLR + RERCDQAY++FD+ ADF+ MW+WNINHMYVY+VAEY + +H RNEVVVWD ILSG+K G I ++GQ NKYSLKDHGYGLR   V +KLKYNILPYMGPLFYGEQ
Sbjct:    1 MHALGPRINVFFTHLMTMLLVLVAIASSFSYYQLSSASPTVDLRISQLSFLRTISRERCDQAYLKFDLTADFQRMWTWNINHMYVYLVAEYVTDSHQRNEVVVWDTILSGKKQGKIERRGQNNKYSLKDHGYGLRGKEVLVKLKYNILPYMGPLFYGEQ 159          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A1X6P653_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P653_PORUM)

HSP 1 Score: 117 bits (292), Expect = 2.890e-30
Identity = 66/158 (41.77%), Postives = 94/158 (59.49%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVDLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEY-ESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLFYG 157
            MH+ G R ++  ++ +  +F+L AI  + +        P V +++  + FLR L  E CDQAYI  DINAD R ++  N  H+Y YV A Y  S TH RNEVVVWD ++S R+   +     + KYSLKD G GLR A V L L+++++P +G L YG
Sbjct:    1 MHSAGTRASILSSYAIGGVFLL-AIAIAVAPTLYAPRLPDVSVRVNSLAFLRYLPAEECDQAYIALDINADLRPLFHTNTKHVYAYVTAAYANSTTHVRNEVVVWDRMISSREAADVKVAKGWVKYSLKDWGVGLRGAPVRLWLRWSLMPRIGGLAYG 157          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A1W0A6I6_9STRA (Signal peptidase complex subunit 3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6I6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 8.870e-30
Identity = 63/156 (40.38%), Postives = 99/156 (63.46%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSV-DLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLF 155
            MH I  R N  FT  MT++ V+ A+ +  +Y  L   +P V  L +  +  L++ YR+R D+A + FD++AD  ++++WN   ++VY+VAEY S T+ +NEVV+WD I+  + D ++ +K +  KY L D    LRNA VT+KLK++I+P  G LF
Sbjct:    1 MHTIWTRANALFTLAMTVMSVMCALTTLTTY--LHEPAPVVRTLSLNAVHSLKR-YRDRTDKAVLSFDLDADLSSVFNWNTKQLFVYIVAEYASKTNEKNEVVIWDAIVPSKDDAILQRKDEGVKYFLADQFDQLRNAQVTMKLKWDIMPVCGRLF 153          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A1V9Z5D1_9STRA (Signal peptidase complex subunit 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5D1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.900e-29
Identity = 64/159 (40.25%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVD-LQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLF-YG 157
            MH I  R N  FT  MT++ V+ A+ +  +Y  L   +P V  LQ+  +  L++ YR+R D+A + FD++AD  ++++WN   ++VYVVAEY S ++ +NEVV+WD I+  + D ++ +K +  KY L D    LRNA VT+KLK++++P  G L  YG
Sbjct:    1 MHTIWTRANALFTLAMTVMSVMCALTTLTTY--LHEPAPVVTTLQLNAVHSLKR-YRDRTDKAVLSFDLDADLSSVFNWNTKQLFVYVVAEYTSASNKKNEVVIWDAIVPSKADAILQRKDEGVKYFLADQHDELRNAVVTMKLKWDVMPVCGRLLQYG 156          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A7S0BT12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BT12_9RHOD)

HSP 1 Score: 110 bits (275), Expect = 1.040e-27
Identity = 52/154 (33.77%), Postives = 93/154 (60.39%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVDLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPL 154
            M+++  R+N   TH +T +  +  +    SYV  R   P VDL +  ++  +  +RER DQA + F+   D R +  WN+  +Y  VV +YE+  + +NE+V+WD++++ ++  LI K   + KY LKD+G+ LR   ++L+LKY ++P++G +
Sbjct:    1 MNSLTSRINTLGTHAVTYLAAMAVVIIVTSYVTPRPV-PEVDLSVKSVKTFQVSWRERNDQAALIFNFQTDLRTLMDWNVFGIYASVVVDYETDLYEKNEIVIWDSVITKKQKALIKKSADFAKYMLKDYGHDLRGKQLSLRLKYVVMPFVGAI 153          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A484EAZ5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAZ5_BRELC)

HSP 1 Score: 101 bits (252), Expect = 3.740e-24
Identity = 61/158 (38.61%), Postives = 104/158 (65.82%), Query Frame = 0
Query:    1 MHAIGPRLN-VFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVD-LQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDG-LIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLF 155
            MH+I  R N VFFT LM +  ++  + S  ++  L  S+P V  L+MTE+  LR  YR++ D+A + F+++AD  ++++WN+  ++VYV+A++ES ++ RN+VV+WD I+  ++   L+  + +  KY L D    LR A+VTL+L+++I+P  G LF
Sbjct:    1 MHSIWTRANNVFFTSLMALA-IMCTLTSLSTF--LHESNPVVRRLEMTELHSLRN-YRDKTDRATLSFNLDADLSSVFNWNVKQLFVYVMADFESASNVRNQVVIWDTIVQTKEAASLLQFQNESVKYFLADQHDELRGANVTLRLEWDIMPVCGRLF 154          
BLAST of Gchil565.t1 vs. uniprot
Match: F0VQP1_NEOCL (Probable signal peptidase complex subunit 3, related n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VQP1_NEOCL)

HSP 1 Score: 100 bits (250), Expect = 6.390e-24
Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   22 LVAIGSSFSYVQLRTSSPSVDLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLFYGE 158
            L A+G+ FS   L+ + P  ++ + E+      +  + +QA +  +I AD  + ++WN   ++VYV+  YE+P +SRNEV++WD+I++  +D ++  +G  NKY L+DHG GLRN  VT+ L+Y   P +G +  G 
Sbjct:   21 LAALGNHFSTYLLQ-ADPIGEVSIAEVYEFGVNHALQGEQAQVALNIQADLTSCFNWNTKQLFVYVIVRYETPKNSRNEVIIWDHIITDPEDAVLGLEGVINKYPLRDHGRGLRNRTVTVSLEYAYHPVVGVIKSGH 156          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A3L6UWK3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UWK3_9STRA)

HSP 1 Score: 100 bits (250), Expect = 6.900e-24
Identity = 60/159 (37.74%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    1 MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSV-DLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPLF-YG 157
            MH    R N  F    T ++ + A+ +  ++  L T SP V  L + +++ LR  YR++ D+A + FD++AD  ++++WN   ++VYVVAEY S ++  N+VVVWD I+  R D  +    +  KY L D    LR+A VTLKL+++++P  G LF YG
Sbjct:    1 MHTFWTRANAVFMAAFTAMYTMCALTTLTTF--LHTPSPLVYTLALNQVQSLRN-YRDKTDRAVLTFDLDADLSSVFNWNTKQLFVYVVAEYTSASNVVNQVVVWDAIVPTRADARLQFADENVKYFLADETNQLRDADVTLKLQWDVMPVCGQLFQYG 156          
BLAST of Gchil565.t1 vs. uniprot
Match: A0A2A9MN73_9APIC (Signal peptidase subunit protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MN73_9APIC)

HSP 1 Score: 100 bits (250), Expect = 8.230e-24
Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   22 LVAIGSSFSYVQLRTSSPSVDLQMTEMRFLRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNEVVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPYMGPL 154
            + A+G+ FS   L  + P+ ++ + ++         + +QA +  +INAD  + ++WN   ++VYVV  YE+P HSRNEV++WD I++  +D ++  +G  N Y L+DHG GLRN  VT+ L+Y   P +G +
Sbjct:   21 IAALGNHFS-THLLQAEPTGEVSIADVYEFGFNQALQGEQAQVSLNINADLTSCFNWNTKQLFVYVVVRYETPKHSRNEVIIWDRIVTDPEDAILEFEGVMNSYPLRDHGRGLRNRTVTVSLEYAYHPIVGSI 152          
The following BLAST results are available for this feature:
BLAST of Gchil565.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0Z0_9FLOR5.910e-9684.28Signal peptidase complex subunit 3 n=1 Tax=Gracila... [more]
S0F3W6_CHOCR1.030e-8271.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P653_PORUM2.890e-3041.77Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1W0A6I6_9STRA8.870e-3040.38Signal peptidase complex subunit 3 n=1 Tax=Thraust... [more]
A0A1V9Z5D1_9STRA6.900e-2940.25Signal peptidase complex subunit 3 n=1 Tax=Achlya ... [more]
A0A7S0BT12_9RHOD1.040e-2733.77Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A484EAZ5_BRELC3.740e-2438.61Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
F0VQP1_NEOCL6.390e-2435.77Probable signal peptidase complex subunit 3, relat... [more]
A0A3L6UWK3_9STRA6.900e-2437.74Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A2A9MN73_9APIC8.230e-2436.09Signal peptidase subunit protein n=1 Tax=Besnoitia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..160
e-value: 1.7E-38
score: 129.8
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 1..159
e-value: 1.9E-44
score: 151.1
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..156
NoneNo IPR availablePANTHERPTHR12804:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 1..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:227509..228239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil565.t1Gchil565.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 227509..228239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil565.t1 ID=Gchil565.t1|Name=Gchil565.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=161bp
MHAIGPRLNVFFTHLMTMIFVLVAIGSSFSYVQLRTSSPSVDLQMTEMRF
LRQLYRERCDQAYIRFDINADFRNMWSWNINHMYVYVVAEYESPTHSRNE
VVVWDNILSGRKDGLIAKKGQYNKYSLKDHGYGLRNAHVTLKLKYNILPY
MGPLFYGEQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3