Gchil6870.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6870.t1
Unique NameGchil6870.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length357
Homology
BLAST of Gchil6870.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR)

HSP 1 Score: 280 bits (715), Expect = 1.240e-87
Identity = 159/291 (54.64%), Postives = 187/291 (64.26%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMNPTQA--KRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPPKDSE---ELEDTTRKLLPRSTGPYKVLKA--NEHTITLLIDGLQDNVSIDRVKRAPSSSGP 284
            MD+  PLP + HG R +LVITDRF KL RA+P+R T A  VA  FL   VYPYG    LL DNG QF +KFF  VC  LGI++V TTAYHPQTN QAERF  TL  RL HYVSEHQ DWD Y+ PL YAYN QVH STGT PF L L R PP I+V    S IP     G  PT A  KR + +R+ +IL    T LT AQ +YK NFD+AV    +F  G  V+LDRPP  S    E ED  RKLLP++TGPY+ +KA  +  T+T+  +GL D VSI+RV + P  S P
Sbjct:   43 MDLYGPLPKTPHGNRHILVITDRFTKLCRAIPLRTTQAQQVAQTFLDAWVYPYGMPDTLLTDNGPQFTAKFFEAVCGLLGIRHVLTTAYHPQTNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTGTTPFDLVLTRHPPGISVQAPSSAIPSP--NGSEPTSAQMKRITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPPDFSATPLENEDGHRKLLPKTTGPYRFIKAPVDGDTVTIERNGLLDAVSINRVTKVPQPSIP 331          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 274 bits (701), Expect = 1.110e-81
Identity = 158/291 (54.30%), Postives = 184/291 (63.23%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMNPTQA--KRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPPKDSE---ELEDTTRKLLPRSTGPYKVLKA--NEHTITLLIDGLQDNVSIDRVKRAPSSSGP 284
            MD+  PLP + HG R  LVITDRF KL RA+P+R T A  VA  FL   VYPYG    LL DNG QF +KFF  VC  LGI++V TTAYHPQTN QAERF  TL  RL HYVSEHQ DWD Y+ PL YAYN QVH ST T PF L L R PP I+V    S IP     G  PT A  K  + +R+ +IL    T LT AQ +YK NFD+AV    +F  G  V+LDRPP  S    E ED  RKLLP++TGPY+V+KA     T+T+  +GL D VSI+RV + P  S P
Sbjct:  427 MDLYGPLPKTPHGNRHKLVITDRFTKLCRAIPLRTTQAQQVAQTFLDAWVYPYGMPDTLLTDNGPQFTAKFFEAVCGPLGIRHVLTTAYHPQTNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTSTTPFDLILTRHPPGISVQAPSSAIPSP--NGSEPTSAQMKPITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPPDFSATPLENEDGHRKLLPKTTGPYRVIKAPVGGDTVTIERNGLLDAVSINRVTKVPQPSVP 715          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR)

HSP 1 Score: 254 bits (648), Expect = 3.400e-77
Identity = 137/283 (48.41%), Postives = 179/283 (63.25%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMNPTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPPKDSEELEDTTRKLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAPSSSG 283
            MD+L PLP ++HG + VLVITDRF KLTR++P+R TTA+ VA AFL + VY YG   Y+L DNG QF +KFF  VCA LG+++  TTAYHPQ+N Q ERF  TL+ RL HYV EHQ DWD Y+ PL +AYNTQVH ST T PF L L R P  +       I+P+D      P Q KR + R++   L    T L+ +Q+RYK +FD+ V  +     GD VY+DRPP+    +E  TR       GP++V  A + T+ +  DG+++ VSIDRV + P   G
Sbjct:  125 MDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYLQPLTFAYNTQVHRSTETTPFDLVLTRPPSGL-------ILPED---PRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRA----QEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPRGPG 393          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 258 bits (660), Expect = 3.690e-77
Identity = 140/283 (49.47%), Postives = 178/283 (62.90%), Query Frame = 0
Query:   10 SSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMN----PTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPPKDSEELE---------DTTRKLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAP 279
            ++HG R VLV+TDRF KLTR++P+R TTA+ VA AFL + VY YG   Y+L DNG QF +KFF  VCA LG+++  TTAYHPQTN Q ERF  TL+ RL HYV+EHQ DWD YI PL +AYNTQVH ST T PF L L R P  +A+      +PQD          P Q KR + R++   L+ T   LT AQRRYK +FD+ V  +     GDLVY+DRPP+     E           + KLLP++ GP++V  A E T+ +  DG+ + VSIDR+ R P
Sbjct:  342 TAHGNRHVLVMTDRFTKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQTNGQTERFNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLAL---PGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRRYKADFDKKVRFRSVIQVGDLVYVDRPPRPLTSTERGDLPSNDGGPSVKLLPKTEGPFRVRSATETTVVVDQDGVSNRVSIDRITRMP 621          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 261 bits (667), Expect = 5.270e-77
Identity = 141/299 (47.16%), Postives = 186/299 (62.21%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDI----TEGMNPTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPPKDSEELEDTTR------------KLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAPSSSG 283
            MD+L PLP ++HG + VLVITDRF KLTR++P+R TTA+ VA AFL + VY YG   Y+L DNG QF +KFF  VCA LG+++  TTAYHPQ+N Q ERF  TL+ RL HYV EHQ DWD Y+ PL +AYNTQVH ST T PF L L R P  +   +    +PQD      +   P Q KR + R++   L    T L+ +Q+RYK +FD+ V  +     GD VY+DRPP+    +E  TR            KLLP++ GP++V  A + T+ +  DG+++ VSIDRV + P   G
Sbjct:  413 MDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPSGL---ILPGTVPQDAGTHREDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRAQGTTGTDELSVKLLPKTEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPRGPG 708          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7QU67_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU67_CHOCR)

HSP 1 Score: 250 bits (638), Expect = 6.270e-77
Identity = 141/298 (47.32%), Postives = 181/298 (60.74%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVH---VQESIIPQDITEGMNPTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPP----------KDSEEL--EDTTRKLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAPSSSG 283
            MD+L PLP ++HG + VLVITDRF +LTR++ +R TT   V  AFL + VY YG   Y+L DNG QF +KFF  VCA LGI +  TTAYHPQTN Q ERF  T++ RL HYV EHQ DWD ++ PL YAYN QVH ST T PF L L R P  + V     Q + +  D  +   P Q KR + R++  +L      +T AQ+RYK NFD+ V  +     GD VY+DRPP          +D + L  +D + KLLP++ GP++V KA + T+T+  D L   VSIDRV R P   G
Sbjct:   15 MDLLGPLPKTAHGNQFVLVITDRFSRLTRSIALRTTTTAVVTNAFLENWVYVYGAPQYVLTDNGPQFAAKFFDAVCALLGIHHYLTTAYHPQTNGQTERFNKTIVQRLRHYVEEHQRDWDEFLQPLAYAYNIQVHRSTETTPFDLVLTRQPSGLTVAGTAPQAAGVAHD--DPRTPVQYKRATLRKLRDVLDRARVKMTAAQKRYKENFDKKVRFRPVIQEGDQVYVDRPPPALRAAERRGRDGQGLGTDDMSVKLLPKTEGPFRVRKATDTTVTVEQDRLPVPVSIDRVTRMPRGLG 310          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 258 bits (659), Expect = 2.650e-75
Identity = 143/308 (46.43%), Postives = 186/308 (60.39%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMN----PTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDLVYLDRPPK------------DSEELEDTTRKLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAPSSSG---PPKSQP 289
            MD+L PLP ++HG + VLVITDRF KLT ++P+R TTA+ VA+AFL + VY YG   Y+L DNG QF +KFF  VCA LG++   TTAYHPQTN Q ERF  TL+ RL HYV EHQ DWD Y+ PL +AYNTQVH ST T PF L L R P  +   +    +PQD    M     P Q KR + R++   L    T LT +Q++YK N D  V  +     GD VY+DRPP+               + ED + KLLP++ GP+ V  A + T+ +  D +++ VSIDRV + P   G   PP+ +P
Sbjct:  509 MDLLGPLPKTAHGNQHVLVITDRFSKLTHSIPLRTTTASVVASAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRPYLTTAYHPQTNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPTGL---ILPGTVPQDAGTHMEDPRTPVQYKRATLRKLRDALDRARTKLTASQKQYKDNLDRKVRFRPVVRAGDFVYVDRPPRTLTSVERRMRVQSPTDTEDLSVKLLPKAEGPFNVRSATDTTVLIEQDSVENRVSIDRVTKMPRGPGIVPPPQRRP 813          
BLAST of Gchil6870.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 201 bits (512), Expect = 3.670e-54
Identity = 127/288 (44.10%), Postives = 160/288 (55.56%), Query Frame = 0
Query:    1 MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMNPTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWNKLTFGRGDL-VYLDRPPKDSEELEDTTR--KLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAPSSSGPP 285
            MDIL PLP + HG R +LVITDRF KLTR +P+R  TA  VA AF    V+ YG   YLL DNG+QF +KFF  VC  LGI  + TTAYHPQTN Q ERF  T++N L  YV   Q DWD Y   + + YN +VH+S    PF L L+R PP ++V       P  I +   PT AK     +I ++L      L ++Q RYK NFD +V  K    R D  VYL R      E+ +  R  KL  +  GPY+V++ +     L I      VS DR+  AP  +GPP
Sbjct:  672 MDILGPLPKTEHGNRFLLVITDRFSKLTRTVPLRTITAIVVAKAFCDAWVFSYGPPRYLLTDNGTQFNAKFFLAVCRELGIAKIFTTAYHPQTNGQVERFNRTIINSLRGYVERRQGDWDDYTAAITFGYNCRVHSSLHLAPFELILSRPPPNLSVETS----PTGIED--TPTSAKLRFLGKIRKLLPLAQQRLAESQARYKKNFDRSVKEKNNNVRPDSWVYLRR------EVHEVGRNPKLDDQVDGPYRVVETDGRVFKLRIGDDDVPVSSDRITPAPKPAGPP 947          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7Q5S0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5S0_CHOCR)

HSP 1 Score: 199 bits (507), Expect = 3.960e-54
Identity = 134/353 (37.96%), Postives = 180/353 (50.99%), Query Frame = 0
Query:    2 DILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMNPTQAKRYSRRRIDRILQSTTTVLTKAQRRYKCNFDEAVWN-KLTFGRGDLVYLDRPPKDSEELEDTTRKLLPRSTGPYKVLKANEHTITLLIDGLQDNVSIDRVKRAPSSSGPPKSQPLAQRKNHDLRSTLKSPHPLREFPRSRLAPQTRWSVPTIMTHRSQP----------TPIDLPLWT 343
            DIL PLP +  GKR +LVITDRF KLT+ +  R  TA  VA AF    V+ YG    LL DNG QF +KFF   C  LGI  + T+AYHPQTN Q ER+  T+   L +YV EHQ DWD Y+GPL YAYN+ VH +T T PF L L+R PP  ++      I  D+       Q   + +  ++  +Q     L + Q RYK +FD+ +         G+ VYL+  P D  +   T+ KL   + GPY+VL  +  TIT+  DG+ + VS DR   AP    PP            LR++  +P  L +  R      T+++V  ++ HR                D P WT
Sbjct:  425 DILGPLPKTKSGKRFLLVITDRFSKLTQVVAFRTITAYTVAVAFCESWVFKYGVPRTLLSDNGPQFNAKFFHSTCRVLGITNMYTSAYHPQTNGQVERYNRTIAAMLRNYVGEHQDDWDMYVGPLTYAYNSHVHRTTNTTPFELVLSRPPPEFSLRR----IDGDVAPADRGNQRAEFLKT-LNSTIQRAYGSLRRTQARYKRDFDKRIRRINSRLHPGEYVYLN--PTDGGK---TSNKLASPAVGPYRVLANDHRTITIDRDGVTERVSADRCVYAP----PPTDA---------LRASTTTPADLADKVRE----GTQYAVERLLKHRDMEDGTIEFLIKWADFDTPTWT 750          
BLAST of Gchil6870.t1 vs. uniprot
Match: R7QG96_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG96_CHOCR)

HSP 1 Score: 187 bits (475), Expect = 4.090e-53
Identity = 114/288 (39.58%), Postives = 167/288 (57.99%), Query Frame = 0
Query:    2 DILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCVYPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERFKCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARAPPLIAVHVQESIIPQDITEGMNPTQAKRYSRRR----IDRILQSTTTVLTKAQRRYKCNFDEAVWNKLT-FGRGDLVYLDRPPK-DSEELEDTTR---KLLPRSTGPYKVLKANEHTITLLID-GLQDNVSIDRVKRAP 279
            DIL  LP +  G R +LV+TDR+ KLTR +P+++ TA  VA AF+SH V+ YG  + LL DNG QF S+FF  VC  L I+ V TTAYHPQTN   ERF  TL++ L +Y++++Q DWD Y   L Y YN  V+   G  PF L L+R P  +A+           T  ++PT ++   + R    +  ++ + ++ L   + RYK  FD  +   +  +  GD V ++R     SEE  +  R   KL P++  P+ VL+ ++HT+T+L   GL+D +S DRV +AP
Sbjct:   44 DILGELPRTPRGNRYLLVMTDRYSKLTRMVPLKRITAETVAQAFISHWVFVYGAPVKLLSDNGGQFTSRFFLAVCKILSIESVFTTAYHPQTNGHVERFNRTLVSTLRNYLADNQRDWDQYTDALTYGYNCTVNRMIGMKPFDLVLSRTPSPLALQQ---------TPRLDPTASRAQFKIRYLAWLRGLMSTASSNLRTGRERYKQEFDNRIRYPVPDYKVGDQVLVNREAALRSEERTEKNRVNNKLAPQTEVPFPVLQVDDHTVTILRGTGLKDRLSRDRVLKAP 322          
The following BLAST results are available for this feature:
BLAST of Gchil6870.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q2U6_CHOCR1.240e-8754.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QR94_CHOCR1.110e-8154.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4X3_CHOCR3.400e-7748.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJ93_CHOCR3.690e-7749.47Integrase catalytic domain-containing protein n=3 ... [more]
R7QN04_CHOCR5.270e-7747.16Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QU67_CHOCR6.270e-7747.32Integrase catalytic domain-containing protein n=1 ... [more]
R7QLF2_CHOCR2.650e-7546.43Integrase catalytic domain-containing protein n=1 ... [more]
UPI001E1E14073.670e-5444.10uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
R7Q5S0_CHOCR3.960e-5437.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QG96_CHOCR4.090e-5339.58Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 2..91
e-value: 2.2E-10
score: 40.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..150
score: 21.646938
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..193
e-value: 5.2E-41
score: 142.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..310
NoneNo IPR availablePANTHERPTHR34072ENZYMATIC POLYPROTEIN-RELATEDcoord: 1..256
NoneNo IPR availablePANTHERPTHR34072:SF9ENZYMATIC POLYPROTEIN-RELATEDcoord: 1..256
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:476121..477191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6870.t1Gchil6870.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 476121..477191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6870.t1 ID=Gchil6870.t1|Name=Gchil6870.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=357bp
MDILMPLPNSSHGKRVVLVITDRFIKLTRALPVRKTTATDVATAFLSHCV
YPYGTLLYLLMDNGSQFVSKFFSQVCATLGIKYVTTTAYHPQTNDQAERF
KCTLLNRLAHYVSEHQLDWDHYIGPLVYAYNTQVHASTGTMPFHLTLARA
PPLIAVHVQESIIPQDITEGMNPTQAKRYSRRRIDRILQSTTTVLTKAQR
RYKCNFDEAVWNKLTFGRGDLVYLDRPPKDSEELEDTTRKLLPRSTGPYK
VLKANEHTITLLIDGLQDNVSIDRVKRAPSSSGPPKSQPLAQRKNHDLRS
TLKSPHPLREFPRSRLAPQTRWSVPTIMTHRSQPTPIDLPLWTTLSFHKM
NINQNM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf