Gchil6840.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6840.t1
Unique NameGchil6840.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length496
Homology
BLAST of Gchil6840.t1 vs. uniprot
Match: A0A2V3IH41_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH41_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 3.610e-30
Identity = 153/522 (29.31%), Postives = 231/522 (44.25%), Query Frame = 0
Query:    6 SANPESERKNVL-NFGAAEASNSMDQTPI-----ITTIKSEEDSNLHSLGTKTIGVVNRIIPAEESVRFSDKDQFNKKRANVGNEQQSHQKQNRRPGTYLIIPENTKLMPF-----------AESENPSQHAKEKTDGRA-SIDKESKSSESNTAMDQHPKE-------VTDGVGTGERGKPI-----KVKSLSFLDGPSPTCIDNANVHFGTPTNQKERSLKIPSPDRLRGHASLKSKGRSKRSQAPAYPVVNITDYGSDNEI-GADLLEAVSVHFETHEKKRSLKSSLRNTKSQESRSITDPRERRAKRDSATQNLSVSAQGNAE-RASAGARVSFDLPENSDLNDSVHPPKPKCHTPFPKDTIALLAGSDSEDSDGVPLECRATVPLSGGSSKSVEDAKVIDSYWVESQRPPQKTAASWMPGWKGERKKCSGAQVPSPSKKAS---FPGNLPVSNSTYNALPSLKKLAQPYIFVRIGRPRNMLTFERATETLNISPGPSYPERPEPVLGSYCCTCGQNV 492
            S N +S  + VL N G+  +  S   TP      +TT  S+E S    + +     + R  P  E++  S+  + +    N+ +++++  K     G  L + +    MP            AE++ P      +  G+  S  KE +S++ ++ +  H K        V    GT    + I     + KSLSFL+  SP  + +   + GT   +       PS  R+RG  + +   + KRSQ PA P +N++DYGSD++I  ADL E+V V+     +K+  K SLR TK +E  S    + +       T + + S Q +   + S  ARVSF   E +        PK +CHTPFP+  + LLA S+SEDSD +  +       S  S+      K +D Y   S    ++ A    P           A   SP++ A+   F     V     N     ++ AQ   FVRIG  RN+LTFE A ET NI P      +P  V GSYC +CG  V
Sbjct:    3 SGNAQSSSQEVLHNQGSLRSQVSPKHTPFSLSVPVTTEDSKELSTFTFVDSDEDATLRR--PQPENIETSEPSEGH----NLPDKERTKGKNE---GINLYLKQEDSQMPVTKKPKTSSVVSAEAQKPDMTVTSEPVGKVQSATKEQRSTQRDSTLFWHQKSEKRNSTTVNAEKGTRSNHETIANLQRRAKSLSFLEETSPRKVGDIGSYAGTAITEASS----PS-SRMRGRTASRVGSKQKRSQTPAAPAINLSDYGSDDDIEAADLAESVCVYDGALGRKKVQKPSLRLTKQEEKMSSILRQRKLTTEIQQTPSCAPSRQNSQNSKISQRARVSFQTKEGTIPAVRETKPKIQCHTPFPRGNLKLLA-SESEDSDDLSFQ------ESRISNSERPSLKPVDDYRSNSLGNLKEDAMPIPP-----------APFRSPTRAANGICFTQYPNVMGPRRNYPHKSRESAQVSCFVRIGGRRNILTFEPAIETTNILPAAPTTSKPALVPGSYCSSCGHRV 492          
The following BLAST results are available for this feature:
BLAST of Gchil6840.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IH41_9FLOR3.610e-3029.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:365173..366660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6840.t1Gchil6840.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 365173..366660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6840.t1 ID=Gchil6840.t1|Name=Gchil6840.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=496bp
MQIGGSANPESERKNVLNFGAAEASNSMDQTPIITTIKSEEDSNLHSLGT
KTIGVVNRIIPAEESVRFSDKDQFNKKRANVGNEQQSHQKQNRRPGTYLI
IPENTKLMPFAESENPSQHAKEKTDGRASIDKESKSSESNTAMDQHPKEV
TDGVGTGERGKPIKVKSLSFLDGPSPTCIDNANVHFGTPTNQKERSLKIP
SPDRLRGHASLKSKGRSKRSQAPAYPVVNITDYGSDNEIGADLLEAVSVH
FETHEKKRSLKSSLRNTKSQESRSITDPRERRAKRDSATQNLSVSAQGNA
ERASAGARVSFDLPENSDLNDSVHPPKPKCHTPFPKDTIALLAGSDSEDS
DGVPLECRATVPLSGGSSKSVEDAKVIDSYWVESQRPPQKTAASWMPGWK
GERKKCSGAQVPSPSKKASFPGNLPVSNSTYNALPSLKKLAQPYIFVRIG
RPRNMLTFERATETLNISPGPSYPERPEPVLGSYCCTCGQNVSHL*
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