Gchil6922.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6922.t1
Unique NameGchil6922.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length899
Homology
BLAST of Gchil6922.t1 vs. uniprot
Match: R7QVK8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVK8_CHOCR)

HSP 1 Score: 560 bits (1443), Expect = 1.180e-184
Identity = 321/761 (42.18%), Postives = 475/761 (62.42%), Query Frame = 0
Query:  140 DVKEGEGKSDEYLAHPKSVYGASIMLKLQWEDKTPQKKVPHRTYEELGHFIGEVHSNLLQALQQNKIAGGAVVNVMAFDLTPLILARYMEGVETCTKVLEENAFKLLTLFVELGNPREVHLAIKTFLKLIDNVYLEAASYLLFKPLMNLWMKLILLIPRMRHKFFRDLLKELDRMLSFAESFEASFVPDEGGTGIEESGRIKGMSERILLFLEDITELQVKQCAQSDKIGLEVDELGRAKTSVARTIESQPLENKASIEAGTGDTVETKRSLESSDEQTNQTRVEGECEKSKGMKAGDDSRNQIGKATTDWVNERAVTLARALQILGLFWADIPPPPGEKKDRSRKTANSKKSEEAQMRRQMRKERKEMLLARCINLFDGLGWSNPVLVCQIANNGLTTQGCSMTDDSFREHLGEDIRSKSERKNTLYSVNGIAQYLCGVLRPKTQSLLR-GIEGTLI-DHYD-YDLTDTAFDLLDATYAFDLILPYAMALISLSDSTLLMAGVLMIRPFLSRLPEGAFETYEEALRLRFAVNVLGREANVFGLALHLVNAIASCDDPKHRQVAYKTLKDLLGKCSHPAVRYTIVECLFQESKRMAVTAQLVTEMKDAVRFSDEVAAKGTRKEW-RMRQASGLRTRFVEVCLPKYFTPQRSLLSCISPMVSTSNVCLFLAASDAYFLQIRKDDEELCEDINRRRRFMKAYCKLGMDCVRALASVAEHDQKNVPSSKLAKDNRNEAMAILTASKETFNQCIAAMSALTRALE 896
            D  + EG+SD+   HPKSVYGASI+LKLQWED+T QKKVP RTY+ LG F+ +V  NL  ALQ N  A   V++ +AF+LTPL++ RY++G+ETCT  LE  A  LL L     N +E+H+AIK F   ID+ YLEA SYL  +P+++LW  +I  IP+ R  F  D +K  DRML  AE+FE SF+P++G  G+E+SGRI G+ + +L FL+ + + Q++Q  +   I +EVD LG A        +S P +NK S ++   +T E  ++ E  D        EG+  + K   A D         TTDW+ ERA+ LA+ L +  + W+ +P PPGE ++  +K + S+K      + +M +E+KE  L +C  LF  LGW+NP +VCQ+A NGL+    S  ++  + H+G    S+ ++ NTLYS   + QY+CG LR  T+     G+EG    D YD  DL+ TAF+LL+  +  DL++PY   ++  +   + +AG++ +R FL R+P+G  +T++E LRLR      GRE N+FG+A H+  A+A  DDPKHR++ Y+TL+ +L KC+ P  RY + E +F E+ R A+ AQL+TEMKDAVR++D ++ + T+ +  R+ QAS LR+R  E  + +YF P++ LL  ++P+ + SN+  FL  SD   L+ +  D+EL  +I +R RF + Y +LG   +RA+ASVAEHD++ +P S LAK N  +A AI  AS  T NQC+ ++S L  AL+
Sbjct:   46 DGGDAEGESDD--EHPKSVYGASILLKLQWEDRTVQKKVPLRTYKTLGMFLSDVTCNLRTALQGNASAAQFVIDAIAFELTPLLVTRYLDGMETCTGALEHGALDLLRLLATHANAKEMHIAIKKFTSKIDSTYLEATSYLALRPVLSLWGDVIPRIPQKRRLFVNDYVKVFDRMLPCAEAFETSFIPNDG-IGVEQSGRIAGIPDTLLDFLDKLADAQIRQM-KDGSISVEVDVLGTAHA------KSFPEKNKESADS---ETEEVNKNKEKGDG------TEGKTSEKKSSAAPDPMAT-----TTDWILERAIALAKVLDVQSMIWSRLPAPPGEDRNVPKKKSKSRKKNSTAKQGKMVEEQKEESLDKCAALFLKLGWNNPAVVCQLARNGLSLDPASRHEELMKLHIGTKSLSRKQKMNTLYSATAVGQYICGALRMWTKRPHEAGMEGGAPRDPYDKIDLSGTAFELLEPFHCLDLVMPYLAPVVMQAGVAVSLAGIVTLRAFLDRIPDGRIKTFDEILRLRNGTASFGREINLFGMAHHVGKALAGYDDPKHRRIGYETLQAMLRKCASPVARYVLCEAIFYETTRNAIAAQLMTEMKDAVRYAD-ISWRDTQGDSDRIVQASHLRSRLSEDTIGRYFIPRKELLGFMNPLCTVSNLVYFLVRSDPQLLE-KTQDKELRNEIEKRLRFCQEYGRLGKQLLRAIASVAEHDRRKIPESALAKKNTVDAAAIFQASGRTLNQCVGSISLLDAALQ 780          
The following BLAST results are available for this feature:
BLAST of Gchil6922.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QVK8_CHOCR1.180e-18442.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 487..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 644..898
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..619
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 620..643

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:715623..718319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6922.t1Gchil6922.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 715623..718319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6922.t1 ID=Gchil6922.t1|Name=Gchil6922.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=899bp
MEAEAYDLKQQEDGSYQMHRQDHRLHVGTGEEAQQQWPDFQQDEEAMPVL
DLPEVWSKVIAEEELKPEGKEEGDVFFCNAKVLVAELKYHILASARNARP
APEVESPVLEGKKEINHSEDLHEPSTPEDSKGDNGEIKEDVKEGEGKSDE
YLAHPKSVYGASIMLKLQWEDKTPQKKVPHRTYEELGHFIGEVHSNLLQA
LQQNKIAGGAVVNVMAFDLTPLILARYMEGVETCTKVLEENAFKLLTLFV
ELGNPREVHLAIKTFLKLIDNVYLEAASYLLFKPLMNLWMKLILLIPRMR
HKFFRDLLKELDRMLSFAESFEASFVPDEGGTGIEESGRIKGMSERILLF
LEDITELQVKQCAQSDKIGLEVDELGRAKTSVARTIESQPLENKASIEAG
TGDTVETKRSLESSDEQTNQTRVEGECEKSKGMKAGDDSRNQIGKATTDW
VNERAVTLARALQILGLFWADIPPPPGEKKDRSRKTANSKKSEEAQMRRQ
MRKERKEMLLARCINLFDGLGWSNPVLVCQIANNGLTTQGCSMTDDSFRE
HLGEDIRSKSERKNTLYSVNGIAQYLCGVLRPKTQSLLRGIEGTLIDHYD
YDLTDTAFDLLDATYAFDLILPYAMALISLSDSTLLMAGVLMIRPFLSRL
PEGAFETYEEALRLRFAVNVLGREANVFGLALHLVNAIASCDDPKHRQVA
YKTLKDLLGKCSHPAVRYTIVECLFQESKRMAVTAQLVTEMKDAVRFSDE
VAAKGTRKEWRMRQASGLRTRFVEVCLPKYFTPQRSLLSCISPMVSTSNV
CLFLAASDAYFLQIRKDDEELCEDINRRRRFMKAYCKLGMDCVRALASVA
EHDQKNVPSSKLAKDNRNEAMAILTASKETFNQCIAAMSALTRALELL*
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