Gchil3924.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3924.t1
Unique NameGchil3924.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length397
Homology
BLAST of Gchil3924.t1 vs. uniprot
Match: A0A2V3J400_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J400_9FLOR)

HSP 1 Score: 309 bits (791), Expect = 7.240e-98
Identity = 170/304 (55.92%), Postives = 204/304 (67.11%), Query Frame = 0
Query:   67 RSDALLRAAVVDTSHWGYVVTRAAPLFAAYTRSRVHRMAALHAMQRLLLHVSGASHAPSLDDAQVTRLCRALFVRDARCGDHAGDAMRPLPRGVAAAGVVARPATGRFARRLRPAADAQQLIMLTREPDNEATALASARMRGNFTCAPLQPNRLEYWDNRFVVAAAPAAVLLATQSRVHQHGSTTAHAPLLRPDRVFAAALRPVDSPTLHARRMHRCSLYVRQLRRCDWQLITAVSARAATFHTPFECIRALPAVFQKPPHSDHPGHLVAVPHLGISARPDLCFVAVRLPRFRCLPPDLDPGFT 370
            +SD LLR +V++TSHWGY+V R   L+  +   R  R+A +HAMQR+ LHVSG++   SLD+ QV RLC A+F   A      GD MR LP+G  AAGVV RPATGRFARRLR   D   L+MLTREPD++  +L S R+RGN+ CAPL   +  YWDNRFV+ AAP + L                AP L   RVF AALRP+     H ++M  C+LY+RQLRR DW L+T+VS R   FHTPFECIRALP VFQK   S   G LVA PHLG+SARPDL F+AVRLPRFRCLP D+DPGFT
Sbjct:  199 QSDDLLRNSVLETSHWGYIVARTDMLYEKFNSGRASRLAVIHAMQRMCLHVSGSAKPLSLDEPQVNRLCEAVFKPSAD-----GD-MRALPKGRTAAGVVLRPATGRFARRLRTGND--HLMMLTREPDHDTPSLFSTRLRGNYACAPLHEQQPVYWDNRFVMHAAPISTL-------------DTEAPQLSAQRVFEAALRPMSQ---HKQQMADCTLYIRQLRRSDWDLMTSVSNRVRQFHTPFECIRALPVVFQKKAGSRATGDLVASPHLGLSARPDLYFMAVRLPRFRCLPDDIDPGFT 478          
BLAST of Gchil3924.t1 vs. uniprot
Match: A0A2V3IBZ6_9FLOR (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBZ6_9FLOR)

HSP 1 Score: 90.9 bits (224), Expect = 5.000e-18
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   67 RSDALLRAAVVDTSHWGYVVTRAAPLFAAYTRSRVHRMAALHAMQRLLLHVSGASHAPSLDDAQVTRLCRALFVRDARCGDHAGDAMRPLPRGVAAAGVVARPATGRFARRL 178
            +SD LLR +V++TSHW Y+V     L+  +      R+A +HA QR+ LHVSG++ + S D+ QV R+C  +F         A + ++ LP G  AAGVV RPATGRF RRL
Sbjct:   67 QSDDLLRNSVLETSHWSYIVAPTDMLYETFNSGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFK------PSADNNIQDLPEGRTAAGVVLRPATGRFGRRL 172          
BLAST of Gchil3924.t1 vs. uniprot
Match: A0A2V3IC46_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC46_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 1.850e-17
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   67 RSDALLRAAVVDTSHWGYVVTRAAPLFAAYTRSRVHRMAALHAMQRLLLHVSGASHAPSLDDAQVTRLCRALFVRDARCGDHAGDAMRPLPRGVAAAGVVARPATGRFARRL 178
            +SD LLR +V+++SHW Y+V     L+  +      R+A +HA QR+ LHVSG++ + S D+ QV R+C  +F         A + ++ LP G  AAGVV RPATGRF RRL
Sbjct:   68 QSDDLLRNSVLESSHWSYIVAPTDMLYETFNSGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFK------PSADNNIQDLPEGRTAAGVVLRPATGRFGRRL 173          
BLAST of Gchil3924.t1 vs. uniprot
Match: A0A2V3ID12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID12_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 3.330e-17
Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 0
Query:   19 SVLPFHNKSSSPPSLVAASRPPYLSRVHAAVARRAATRLDAAAAALAARSDALLRAAVVDTSHWGYVVTRAAPLFAAYTRSRVHRMAALHAMQRLLLHVSGASHAPSLDDAQVTRLCRALFVRDARCGDHAGDAMRPLPRGVAAAGVVARPATGRFARRL 178
            +V+P +N+++ P  +     PP L +    +A +  + L      L  +SD LLR +V++TSHW Y+V     L+  +      R+A +HA QR+ LHVSG++ + S D+ QV R+C  +F           + ++ LP G  AAGVV RPATGRF RRL
Sbjct:   84 NVIPEYNRTADPTFM-----PPQLIQAALQLADQKKSSLQL----LQHQSDDLLRNSVLETSHWSYIVAPTDMLYETFNFGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFK------PSVDNNIQDLPEGRTAAGVVLRPATGRFGRRL 228          
The following BLAST results are available for this feature:
BLAST of Gchil3924.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J400_9FLOR7.240e-9855.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBZ6_9FLOR5.000e-1844.64Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3IC46_9FLOR1.850e-1743.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID12_9FLOR3.330e-1736.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000010_piloncontigtig00000010_pilon:1428411..1429601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3924.t1Gchil3924.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000010_pilon 1428411..1429601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3924.t1 ID=Gchil3924.t1|Name=Gchil3924.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=397bp
MTAAVPAPAARHVETPPPSVLPFHNKSSSPPSLVAASRPPYLSRVHAAVA
RRAATRLDAAAAALAARSDALLRAAVVDTSHWGYVVTRAAPLFAAYTRSR
VHRMAALHAMQRLLLHVSGASHAPSLDDAQVTRLCRALFVRDARCGDHAG
DAMRPLPRGVAAAGVVARPATGRFARRLRPAADAQQLIMLTREPDNEATA
LASARMRGNFTCAPLQPNRLEYWDNRFVVAAAPAAVLLATQSRVHQHGST
TAHAPLLRPDRVFAAALRPVDSPTLHARRMHRCSLYVRQLRRCDWQLITA
VSARAATFHTPFECIRALPAVFQKPPHSDHPGHLVAVPHLGISARPDLCF
VAVRLPRFRCLPPDLDPGFTPDHYHRWMAHSHAPRAPKCSSSSHSA*
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