Gchil4104.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4104.t1
Unique NameGchil4104.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length207
Homology
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BLAST of Gchil4104.t1 vs. uniprot
Match: A0A2V3IIA4_9FLOR (DNA-directed DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIA4_9FLOR)

HSP 1 Score: 84.7 bits (208), Expect = 1.750e-15
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:    1 MVRWIIVDEKSRVSGVVFPGHNEVVKQVIGVSKAEAVLSNIGNGPEKHIAEYE--RDEPDPNFAVQDDSLLLVWEEVDRESSGTMQVIVDDVPRVEDTRAVVFIVR 104
            M RW+I D  SRV+GVVFPG+ EVV+Q +  S  E       N  E+   +      E +P F V++D+ ++VW  VD ESSGT+Q+IVDDV RVE  RA+V   R
Sbjct: 1126 MARWMIEDTASRVTGVVFPGYYEVVQQRLEHSSDENGRHEKDNEEERGFTDTSLIEAEEEPRFVVENDARVIVWGRVDSESSGTVQIIVDDVLRVEQVRAIVATAR 1231
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BLAST of Gchil4104.t1 vs. uniprot
Match: R7Q6G4_CHOCR (Vps39_2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6G4_CHOCR)

HSP 1 Score: 65.9 bits (159), Expect = 4.700e-9
Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:  124 VLSLIKEFFWRRGLSEVGQSSVPFALPENIWVLIVDQKLLTYFSFSEKLEEMENVFKSRSGMQILDS 190
            +LS +   F R+ +     S+V FALP+N W+L VDQ+L+ Y SF  +++++ENVFKSRSG+ + D+
Sbjct:    1 MLSFLGGLFARKSMLANVASAVAFALPDNRWLLTVDQELVPYSSFGARIDDLENVFKSRSGLDMSDT 67
The following BLAST results are available for this feature:
BLAST of Gchil4104.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIA4_9FLOR1.750e-1546.23DNA-directed DNA polymerase n=1 Tax=Gracilariopsis... [more]
R7Q6G4_CHOCR4.700e-944.78Vps39_2 domain-containing protein n=1 Tax=Chondrus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:769751..770371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4104.t1Gchil4104.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 769751..770371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4104.t1 ID=Gchil4104.t1|Name=Gchil4104.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=207bp
MVRWIIVDEKSRVSGVVFPGHNEVVKQVIGVSKAEAVLSNIGNGPEKHIA
EYERDEPDPNFAVQDDSLLLVWEEVDRESSGTMQVIVDDVPRVEDTRAVV
FIVRKNRSENHKRKSTAVNGGPTVLSLIKEFFWRRGLSEVGQSSVPFALP
ENIWVLIVDQKLLTYFSFSEKLEEMENVFKSRSGMQILDSFASVKTRKKA
YPRCIE*
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