|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005707453.1 |
| PFAMs | FAD_binding_8,Ferric_reduct,NAD_binding_6 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K13411,ko:K13447,ko:K21424 |
| KEGG TC | 5.B.1.1.5,5.B.1.2 |
| KEGG Pathway | ko04013,ko04016,ko04624,ko04626,map04013,map04016,map04624,map04626 |
| Evalue | 1.1e-61 |
| EggNOG OGs | KOG0039@1|root,KOG0039@2759|Eukaryota |
| EC | 1.6.3.1 |
| Description | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor |
| COG category | C |
| BRITE | ko00000,ko00001,ko01000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil4140.t1 ID=Gchil4140.t1|Name=Gchil4140.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=785bp MNPTVPDDPQTKREKALRILASIDARLQCYSPTYTFLLSYCLGNIVLFFF AAVKEYENWKDDAFVAWTVAIARGTGFILNLNIAIVILLASRKTLTFLRS TPISSLLPLDHAMPEMHTFVAVFSFALAILHGILHSVAGITRKFWAPGFG KWTYCFATGCTLVVIFVTIFVTAVPPARRTNFERFIHVHFVGAALFLPLL MLHGFYDGVIYTYRWILAPTLIYCVDKFISFGFQNKASLYVRVGAECRNS FQGGEITRLSFPKPFHYRAGQYAELCIPLISRSQWHPFTMASAPQEENIL FFIKKAGDWTGDLYNLCKAGLHPRTRVPVDSFEVKIRGPYGAPAQHVGQY EKILLISGGVGATPFCSVTKEINEEISRNFFQKTRMDDVIDMSQSSWPSE YSSSQCGENSVRGPDILDAGRTLFFDGLKRPRKQSRPFLADIKKTPHMIK TKGHDDLSVIPTQTRSQFLYTLASTSMFNTIMLWLLLLRLSVCLLAVCFS MVDFEGKGTDVFRSPYFTWVDDILSGIFFAMLLFAMVAELVSERRATIEE WLVLLPLAGAPFLFDNMALAGRGTETGHIAAFEFYVGWPILVLTFLFRYF RIVGRRALLSDTIRKSYQTTKSVDFIWTTKTRDEDKWLIEELSKSVGSSS FVRLHRFITREETPEDQETSVPRSPGSFRGELLFRDNYGRPNWPEIFQNF TAKMKNGTTAGIFFCGPPKMAAEVKQAATMAMFDSRYRSISTAQETTDIG RMQSLLFSQNKGPAVPDSLSRSFNVRYVFREEKF* back to topspliced messenger RNA >Gchil4140.t1 ID=Gchil4140.t1|Name=Gchil4140.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2355bp|location=Sequence derived from alignment at tig00004373_pilon:984825..987475- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAATCCAACGGTACCAGACGATCCGCAAACAAAACGTGAAAAAGCTCT TCGAATTCTTGCATCGATTGATGCAAGGCTTCAATGCTACAGTCCGACGT ACACCTTCCTGCTCAGCTACTGCCTCGGAAATATCGTTCTTTTCTTCTTT GCCGCTGTCAAAGAGTATGAGAACTGGAAAGATGATGCTTTTGTGGCTTG GACCGTCGCCATCGCTAGGGGGACGGGGTTCATTCTGAACCTTAACATTG CCATCGTAATTTTGCTCGCCTCTCGAAAAACTCTAACATTCCTCCGCTCT ACTCCCATCAGCTCGCTTCTACCGTTGGACCATGCTATGCCCGAAATGCA CACATTCGTGGCGGTCTTCTCTTTCGCTTTAGCCATACTGCACGGCATCC TCCACAGCGTGGCAGGTATTACCCGAAAGTTTTGGGCACCAGGGTTTGGA AAGTGGACCTATTGTTTTGCTACTGGTTGCACCCTGGTCGTCATCTTTGT CACGATCTTTGTTACCGCAGTCCCTCCAGCCAGGCGAACCAATTTTGAGA GATTTATCCACGTCCATTTTGTTGGTGCAGCTTTATTTCTTCCATTGCTC ATGCTCCATGGTTTCTACGACGGCGTGATTTATACGTACAGATGGATACT TGCACCAACACTGATCTATTGCGTAGACAAATTCATATCCTTTGGATTTC AGAATAAGGCATCTTTGTACGTTCGAGTCGGAGCAGAGTGCCGTAATAGC TTTCAGGGAGGCGAAATAACACGTTTATCTTTTCCAAAACCATTCCATTA CCGAGCGGGTCAATACGCAGAACTCTGTATACCGTTGATAAGTCGTTCTC AGTGGCATCCTTTCACGATGGCATCTGCTCCTCAGGAGGAGAACATCTTG TTTTTCATCAAGAAAGCTGGTGATTGGACGGGTGATCTATACAACTTATG CAAGGCAGGTCTTCATCCAAGAACACGGGTGCCGGTGGATTCGTTCGAAG TGAAAATCAGGGGACCCTACGGAGCTCCTGCCCAACATGTAGGCCAGTAC GAGAAAATCTTACTCATTTCCGGTGGTGTGGGAGCCACACCGTTCTGCAG CGTCACCAAAGAGATCAATGAAGAAATCTCACGGAATTTCTTTCAGAAAA CTCGTATGGACGATGTCATTGACATGTCCCAGTCTTCATGGCCTTCGGAA TATTCATCATCTCAATGTGGAGAAAATAGTGTGAGAGGACCGGATATTCT AGATGCCGGTCGAACTCTCTTCTTTGATGGTTTGAAACGTCCGCGGAAGC AGTCACGGCCATTCTTAGCGGACATTAAGAAAACACCTCATATGATTAAG ACAAAAGGCCATGACGATTTGTCTGTCATCCCAACTCAGACAAGAAGCCA GTTTCTCTACACGCTGGCTAGCACGTCAATGTTCAACACCATTATGCTTT GGCTTCTACTTCTCCGGTTGTCCGTTTGTCTCCTCGCAGTGTGCTTCTCA ATGGTTGATTTCGAAGGCAAAGGAACTGATGTGTTTCGCAGTCCGTACTT TACATGGGTCGATGATATTCTTTCCGGCATCTTTTTTGCAATGCTTCTGT TCGCCATGGTGGCGGAGTTGGTTTCTGAAAGACGGGCAACAATTGAAGAA TGGCTTGTATTGCTGCCTTTGGCCGGCGCACCGTTTTTATTTGACAACAT GGCACTAGCGGGAAGAGGTACAGAAACCGGGCACATTGCGGCTTTCGAAT TCTATGTTGGGTGGCCCATACTTGTGTTGACATTCTTGTTTCGATATTTT CGCATTGTTGGACGAAGAGCATTGCTTTCTGATACCATTCGGAAATCGTA CCAAACAACCAAATCTGTCGATTTTATCTGGACCACGAAGACCCGTGATG AAGATAAGTGGCTCATTGAAGAGCTTTCGAAATCAGTAGGAAGCTCGTCG TTTGTTCGCTTACATAGGTTTATAACCCGAGAAGAAACCCCAGAAGATCA GGAGACGTCCGTTCCACGGAGTCCTGGATCTTTCCGCGGGGAGCTTTTAT TTCGTGACAATTATGGTCGTCCGAATTGGCCGGAGATCTTTCAGAACTTC ACAGCTAAGATGAAAAACGGAACTACAGCTGGCATATTCTTTTGTGGACC ACCGAAGATGGCGGCCGAGGTGAAACAAGCTGCGACAATGGCTATGTTTG ATTCGAGGTACAGAAGCATCTCTACGGCTCAGGAAACGACAGATATTGGT CGTATGCAATCTCTGCTGTTTTCCCAAAACAAAGGCCCCGCCGTCCCTGA CTCGTTAAGTCGATCATTCAACGTCCGCTACGTTTTCCGTGAGGAAAAGT TCTAG back to topprotein sequence of Gchil4140.t1 >Gchil4140.t1 ID=Gchil4140.t1|Name=Gchil4140.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=785bp
MNPTVPDDPQTKREKALRILASIDARLQCYSPTYTFLLSYCLGNIVLFFF AAVKEYENWKDDAFVAWTVAIARGTGFILNLNIAIVILLASRKTLTFLRS TPISSLLPLDHAMPEMHTFVAVFSFALAILHGILHSVAGITRKFWAPGFG KWTYCFATGCTLVVIFVTIFVTAVPPARRTNFERFIHVHFVGAALFLPLL MLHGFYDGVIYTYRWILAPTLIYCVDKFISFGFQNKASLYVRVGAECRNS FQGGEITRLSFPKPFHYRAGQYAELCIPLISRSQWHPFTMASAPQEENIL FFIKKAGDWTGDLYNLCKAGLHPRTRVPVDSFEVKIRGPYGAPAQHVGQY EKILLISGGVGATPFCSVTKEINEEISRNFFQKTRMDDVIDMSQSSWPSE YSSSQCGENSVRGPDILDAGRTLFFDGLKRPRKQSRPFLADIKKTPHMIK TKGHDDLSVIPTQTRSQFLYTLASTSMFNTIMLWLLLLRLSVCLLAVCFS MVDFEGKGTDVFRSPYFTWVDDILSGIFFAMLLFAMVAELVSERRATIEE WLVLLPLAGAPFLFDNMALAGRGTETGHIAAFEFYVGWPILVLTFLFRYF RIVGRRALLSDTIRKSYQTTKSVDFIWTTKTRDEDKWLIEELSKSVGSSS FVRLHRFITREETPEDQETSVPRSPGSFRGELLFRDNYGRPNWPEIFQNF TAKMKNGTTAGIFFCGPPKMAAEVKQAATMAMFDSRYRSISTAQETTDIG RMQSLLFSQNKGPAVPDSLSRSFNVRYVFREEKF* back to topmRNA from alignment at tig00004373_pilon:984825..987475- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil4140.t1 ID=Gchil4140.t1|Name=Gchil4140.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2651bp|location=Sequence derived from alignment at tig00004373_pilon:984825..987475- (Gracilaria chilensis NLEC103_M9 male) ATGAATCCAACGGTACCAGACGATCCGCAAACAAAACGTGAAAAAGCTCT
TCGAATTCTTGCATCGATTGATGCAAGGCTTCAATGCTACAGTCCGACGT
ACACCTTCCTGCTCAGCTACTGCCTCGGAAATATCGTTCTTTTCTTCTTT
GCCGCTGTCAAAGAGTATGAGAACTGGAAAGATGATGCTTTTGTGGCTTG
GACCGTCGCCATCGCTAGGGGGACGGGGTTCATTCTGAACCTTAACATTG
CCATCGTAATTTTGCTCGCCTCTCGAAAAACTCTAACATTCCTCCGCTCT
ACTCCCATCAGCTCGCTTCTACCGTTGGACCATGCTATGCCCGAAATGCA
CACATTCGTGGCGGTCTTCTCTTTCGCTTTAGCCATACTGCACGGCATCC
TCCACAGCGTGGCAGGTATTACCCGAAAGTTTTGGGCACCAGGGTTTGGA
AAGTGGACCTATTGTTTTGCTACTGGTTGCACCCTGGTCGTCATCTTTGT
CACGATCTTTGTTACCGCAGTCCCTCCAGCCAGGCGAACCAATTTTGAGA
GATTTATCCACGTCCATTTTGTTGGTGCAGCTTTATTTCTTCCATTGCTC
ATGCTCCATGGTTTCTACGACGGCGTGATTTATACGTACAGATGGATACT
TGCACCAACACTGATCTATTGCGTAGACAAATTCATATCCTTTGGATTTC
AGAATAAGGCATCTTTGTACGTTCGAGTCGGAGCAGAGTGCCGTAATAGC
TTTCAGGGAGGCGAAATAAGTAAGTCTCCAGAAACTTTAGAGCGGGACAG
AGAAAAAGAGAAGATTCTGACATTTTTTTCTTCAAACACAGCACGTTTAT
CTTTTCCAAAACCATTCCATTACCGAGCGGGTCAATACGCAGAACTCTGT
ATACCGTTGATAAGTCGTTCTCAGTGGCATCGTAAGTTTTTCTTTCAAGC
AACCTCATTGCACTCGTTTGAGGTGCGGTTTCGCTTATCCTGGGTATCCA
ATGAACTGTACTGACTTGAGGCTTTGCTTCACTTCTTTCTATATCTCTTC
AACAGCTTTCACGATGGCATCTGCTCCTCAGGAGGAGAACATCTTGTTTT
TCATCAAGAAAGCTGGTGATTGGACGGGTGATCTATACAACTTATGCAAG
GCAGGTCTTCATCCAAGAACACGGGTGCCGGTGGATTCGTTCGAAGTGAA
AATCAGGGGACCCTACGGAGCTCCTGCCCAACATGTAGGCCAGTACGAGA
AAATCTTACTCATTTCCGGTGGTGTGGGAGCCACACCGTTCTGCAGGTAA
GCGTTTGTCATTTGGCTTCGACTGTTTTCGAGAACTAGTCATTGAAACTG
ACCCTTCCGAATCGTTTATCCTTTCCCCCCTCCACCGCCATTGAAGCGTC
ACCAAAGAGATCAATGAAGAAATCTCACGGAATTTCTTTCAGAAAACTCG
TATGGACGATGTCATTGACATGTCCCAGTCTTCATGGCCTTCGGAATATT
CATCATCTCAATGTGGAGAAAATAGTGTGAGAGGACCGGATATTCTAGAT
GCCGGTCGAACTCTCTTCTTTGATGGTTTGAAACGTCCGCGGAAGCAGTC
ACGGCCATTCTTAGCGGACATTAAGAAAACACCTCATATGATTAAGACAA
AAGGCCATGACGATTTGTCTGTCATCCCAACTCAGACAAGAAGCCAGTTT
CTCTACACGCTGGCTAGCACGTCAATGTTCAACACCATTATGCTTTGGCT
TCTACTTCTCCGGTTGTCCGTTTGTCTCCTCGCAGTGTGCTTCTCAATGG
TTGATTTCGAAGGCAAAGGAACTGATGTGTTTCGCAGTCCGTACTTTACA
TGGGTCGATGATATTCTTTCCGGCATCTTTTTTGCAATGCTTCTGTTCGC
CATGGTGGCGGAGTTGGTTTCTGAAAGACGGGCAACAATTGAAGAATGGC
TTGTATTGCTGCCTTTGGCCGGCGCACCGTTTTTATTTGACAACATGGCA
CTAGCGGGAAGAGGTACAGAAACCGGGCACATTGCGGCTTTCGAATTCTA
TGTTGGGTGGCCCATACTTGTGTTGACATTCTTGTTTCGATATTTTCGCA
TTGTTGGACGAAGAGCATTGCTTTCTGATACCATTCGGAAATCGTACCAA
ACAACCAAATCTGTCGATTTTATCTGGACCACGAAGACCCGTGATGAAGA
TAAGTGGCTCATTGAAGAGCTTTCGAAATCAGTAGGAAGCTCGTCGTTTG
TTCGCTTACATAGGTTTATAACCCGAGAAGAAACCCCAGAAGATCAGGAG
ACGTCCGTTCCACGGAGTCCTGGATCTTTCCGCGGGGAGCTTTTATTTCG
TGACAATTATGGTCGTCCGAATTGGCCGGAGATCTTTCAGAACTTCACAG
CTAAGATGAAAAACGGAACTACAGCTGGCATATTCTTTTGTGGACCACCG
AAGATGGCGGCCGAGGTGAAACAAGCTGCGACAATGGCTATGTTTGATTC
GAGGTACAGAAGCATCTCTACGGCTCAGGAAACGACAGATATTGGTCGTA
TGCAATCTCTGCTGTTTTCCCAAAACAAAGGCCCCGCCGTCCCTGACTCG
TTAAGTCGATCATTCAACGTCCGCTACGTTTTCCGTGAGGAAAAGTTCTA
G back to topCoding sequence (CDS) from alignment at tig00004373_pilon:984825..987475- >Gchil4140.t1 ID=Gchil4140.t1|Name=Gchil4140.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2355bp|location=Sequence derived from alignment at tig00004373_pilon:984825..987475- (Gracilaria chilensis NLEC103_M9 male) ATGAATCCAACGGTACCAGACGATCCGCAAACAAAACGTGAAAAAGCTCT TCGAATTCTTGCATCGATTGATGCAAGGCTTCAATGCTACAGTCCGACGT ACACCTTCCTGCTCAGCTACTGCCTCGGAAATATCGTTCTTTTCTTCTTT GCCGCTGTCAAAGAGTATGAGAACTGGAAAGATGATGCTTTTGTGGCTTG GACCGTCGCCATCGCTAGGGGGACGGGGTTCATTCTGAACCTTAACATTG CCATCGTAATTTTGCTCGCCTCTCGAAAAACTCTAACATTCCTCCGCTCT ACTCCCATCAGCTCGCTTCTACCGTTGGACCATGCTATGCCCGAAATGCA CACATTCGTGGCGGTCTTCTCTTTCGCTTTAGCCATACTGCACGGCATCC TCCACAGCGTGGCAGGTATTACCCGAAAGTTTTGGGCACCAGGGTTTGGA AAGTGGACCTATTGTTTTGCTACTGGTTGCACCCTGGTCGTCATCTTTGT CACGATCTTTGTTACCGCAGTCCCTCCAGCCAGGCGAACCAATTTTGAGA GATTTATCCACGTCCATTTTGTTGGTGCAGCTTTATTTCTTCCATTGCTC ATGCTCCATGGTTTCTACGACGGCGTGATTTATACGTACAGATGGATACT TGCACCAACACTGATCTATTGCGTAGACAAATTCATATCCTTTGGATTTC AGAATAAGGCATCTTTGTACGTTCGAGTCGGAGCAGAGTGCCGTAATAGC TTTCAGGGAGGCGAAATAACACGTTTATCTTTTCCAAAACCATTCCATTA CCGAGCGGGTCAATACGCAGAACTCTGTATACCGTTGATAAGTCGTTCTC AGTGGCATCCTTTCACGATGGCATCTGCTCCTCAGGAGGAGAACATCTTG TTTTTCATCAAGAAAGCTGGTGATTGGACGGGTGATCTATACAACTTATG CAAGGCAGGTCTTCATCCAAGAACACGGGTGCCGGTGGATTCGTTCGAAG TGAAAATCAGGGGACCCTACGGAGCTCCTGCCCAACATGTAGGCCAGTAC GAGAAAATCTTACTCATTTCCGGTGGTGTGGGAGCCACACCGTTCTGCAG CGTCACCAAAGAGATCAATGAAGAAATCTCACGGAATTTCTTTCAGAAAA CTCGTATGGACGATGTCATTGACATGTCCCAGTCTTCATGGCCTTCGGAA TATTCATCATCTCAATGTGGAGAAAATAGTGTGAGAGGACCGGATATTCT AGATGCCGGTCGAACTCTCTTCTTTGATGGTTTGAAACGTCCGCGGAAGC AGTCACGGCCATTCTTAGCGGACATTAAGAAAACACCTCATATGATTAAG ACAAAAGGCCATGACGATTTGTCTGTCATCCCAACTCAGACAAGAAGCCA GTTTCTCTACACGCTGGCTAGCACGTCAATGTTCAACACCATTATGCTTT GGCTTCTACTTCTCCGGTTGTCCGTTTGTCTCCTCGCAGTGTGCTTCTCA ATGGTTGATTTCGAAGGCAAAGGAACTGATGTGTTTCGCAGTCCGTACTT TACATGGGTCGATGATATTCTTTCCGGCATCTTTTTTGCAATGCTTCTGT TCGCCATGGTGGCGGAGTTGGTTTCTGAAAGACGGGCAACAATTGAAGAA TGGCTTGTATTGCTGCCTTTGGCCGGCGCACCGTTTTTATTTGACAACAT GGCACTAGCGGGAAGAGGTACAGAAACCGGGCACATTGCGGCTTTCGAAT TCTATGTTGGGTGGCCCATACTTGTGTTGACATTCTTGTTTCGATATTTT CGCATTGTTGGACGAAGAGCATTGCTTTCTGATACCATTCGGAAATCGTA CCAAACAACCAAATCTGTCGATTTTATCTGGACCACGAAGACCCGTGATG AAGATAAGTGGCTCATTGAAGAGCTTTCGAAATCAGTAGGAAGCTCGTCG TTTGTTCGCTTACATAGGTTTATAACCCGAGAAGAAACCCCAGAAGATCA GGAGACGTCCGTTCCACGGAGTCCTGGATCTTTCCGCGGGGAGCTTTTAT TTCGTGACAATTATGGTCGTCCGAATTGGCCGGAGATCTTTCAGAACTTC ACAGCTAAGATGAAAAACGGAACTACAGCTGGCATATTCTTTTGTGGACC ACCGAAGATGGCGGCCGAGGTGAAACAAGCTGCGACAATGGCTATGTTTG ATTCGAGGTACAGAAGCATCTCTACGGCTCAGGAAACGACAGATATTGGT CGTATGCAATCTCTGCTGTTTTCCCAAAACAAAGGCCCCGCCGTCCCTGA CTCGTTAAGTCGATCATTCAACGTCCGCTACGTTTTCCGTGAGGAAAAGT TCTAG back to top
|