Gchil3877.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3877.t1
Unique NameGchil3877.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length200
Homology
BLAST of Gchil3877.t1 vs. uniprot
Match: R7Q6P0_CHOCR (18S rRNA aminocarboxypropyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P0_CHOCR)

HSP 1 Score: 192 bits (487), Expect = 7.250e-58
Identity = 97/171 (56.73%), Postives = 124/171 (72.51%), Query Frame = 0
Query:    2 GTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSD-DPFWGL------------GRSDEEESESEDYGGDI 159
            G  AIS+ D+ +  S GLGVVDCSWAR++EV FDRL+SGADRLLPFLIAANPVNYGKPL+L+CAEALA  L+I GF + AR V++KFVWGD F+ LN +LLD Y +C+  ++VV+VQN YI  CE+EV ERK+ + +PF  +            GR  E+E+ S D G D+
Sbjct:   41 GANAISREDAPMIASAGLGVVDCSWARLDEVPFDRLRSGADRLLPFLIAANPVNYGKPLRLSCAEALAAALHIAGFGEEARNVMAKFVWGDGFFTLNKELLDAYADCKNGKEVVSVQNEYIETCEREVRERKEREYNPFPDMTSSEXXXXXXXDGRGVEDEANSGDRGDDL 211          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A6G0WJW4_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJW4_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.590e-46
Identity = 79/153 (51.63%), Postives = 108/153 (70.59%), Query Frame = 0
Query:    2 GTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSDDPFWGLGRSDEEESESED 154
            GT+ +S+ D  + ES G+ V+DCSWARI+E+   ++KSG+ RLLPFL+AAN VNYGKP KL+C EA+A  LYI+G AD A Q++ +F WG  F +LN D LD Y  CE SE+VVA Q AY+ +C+ E+++R++  D   GL   +EEE   ED
Sbjct:   96 GTKLVSREDLTIVESTGISVIDCSWARIQEMGIKQIKSGSHRLLPFLVAANTVNYGKPHKLSCVEAIAATLYIVGLADEAVQLMEEFPWGIEFLKLNADALDAYAACETSEEVVAAQEAYLASCQAELDDRRRRLD-LPGLSSDEEEEDAEED 247          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A3R7BIR3_9STRA (18S rRNA aminocarboxypropyltransferase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BIR3_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.610e-44
Identity = 78/161 (48.45%), Postives = 113/161 (70.19%), Query Frame = 0
Query:    2 GTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSDDPFWGLGRSDEEESESEDYGGDIESE 162
            GT+ +S+ D  + ES G+ V+DCSWARI+E+   ++KSG  RLLPFL+AAN VNYGKP KL+C EA+A  LYI+G AD A Q++ +F WG  F ++N D+LD Y  CE S++VVA Q+AY+ +C+ EV++R+   D    L  +D+++SE +    D E+E
Sbjct:  124 GTKIVSREDLGIVESIGISVIDCSWARIQEMGIKQIKSGTHRLLPFLVAANTVNYGKPHKLSCVEAIAATLYIVGLADEAVQLMDEFPWGMEFLKINADVLDAYAACETSDEVVAAQDAYLASCQAEVDDRRNRLD-LPSLSDNDDDDSEVDSDAHDDEAE 283          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A024UTD3_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTD3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 9.030e-44
Identity = 83/192 (43.23%), Postives = 124/192 (64.58%), Query Frame = 0
Query:    2 GTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERK-KSDDPFWGLGRSDEEESESEDYGGDIESETGNEVCNANVENMLDAMRVNEDGREEPPSD 192
            GT+ +S+ D  + ES G+ V+DCSWARI+E+   ++ SG  RLLPFL+AAN VNYGKP KL+C EA+A  LYI+G AD A Q++ +F WG  F ++N D+LD Y  CE S++VVA Q+AY+ +C+ EV++R+ + D P      SDEE S+ ++   + E+    ++   +      A+   ED  + PP+D
Sbjct:  107 GTKLVSREDLGIVESVGISVIDCSWARIQEMGIKQINSGTHRLLPFLVAANTVNYGKPHKLSCVEAIAATLYIVGLADEAVQLMDEFPWGMEFLKINADVLDAYAACESSDEVVAAQDAYLASCQAEVDDRRNRLDLP----ALSDEEGSDEDEEAAEAEAAMVYKIHRPHA-----AVNAQEDDDQLPPTD 289          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A6A4JAE1_APOLU (18S rRNA aminocarboxypropyltransferase n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4JAE1_APOLU)

HSP 1 Score: 154 bits (388), Expect = 2.930e-43
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0
Query:    1 MGTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKK 134
            MG + +S+AD  + E  G  VVDCSWARIEE  F ++ +   RLLP+L+A NPVNYG+PLKL+C EALAG  YI GF + A   +SKF WGDSF  LN +LLD Y +CE S DVV VQN Y+++   + +ER +
Sbjct:   82 MGEKCVSRADKDIVEKYGAAVVDCSWARIEETPFHQMVAPQSRLLPYLVAGNPVNYGRPLKLSCVEALAGLFYITGFPEIAEHYMSKFSWGDSFLDLNRNLLDDYASCETSADVVRVQNEYLSSSGSQDDERPR 215          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A1X2IIL5_9FUNG (18S rRNA aminocarboxypropyltransferase n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IIL5_9FUNG)

HSP 1 Score: 154 bits (388), Expect = 3.850e-43
Identity = 69/134 (51.49%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    1 MGTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKK 134
            +G +A+S AD  + E  G GVVDCSWARI+EV F ++K   DRLLP+L+A NPVNYGKP KL CAEALA   Y+ GF D    ++SKF WG +F+++N  LL++Y  C+ S +VVAVQN Y+ + E++   ++K
Sbjct:   44 VGEKAVSPADRSIVEQYGAGVVDCSWARIDEVPFTKIKGPTDRLLPYLVATNPVNYGKPWKLNCAEALAAIFYVTGFPDHGEALMSKFKWGHAFYKVNAGLLNRYAKCKDSTEVVAVQNEYLASLEEDERRKEK 177          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A485LMC1_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMC1_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.050e-43
Identity = 70/133 (52.63%), Postives = 96/133 (72.18%), Query Frame = 0
Query:    2 GTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKK 134
            GT+ +S+ D  + ES G+ V+DCSWARI+E+   ++KSG  RLLPFL+AAN VNYGKP KL+C EA+A  LYI+G AD A Q++ +F WG  F +LN D+LD Y  CE SE+V+A Q  ++  C+ E +ER+K
Sbjct:  121 GTKLVSREDLGIVESIGISVIDCSWARIQEMGIKQIKSGTHRLLPFLVAANTVNYGKPHKLSCVEAIAATLYIVGLADEAVQLMEEFPWGIEFLKLNADVLDAYAECETSEEVLAAQETFLATCQAENDERRK 253          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A367JD18_RHIAZ (18S rRNA aminocarboxypropyltransferase n=5 Tax=Rhizopus TaxID=4842 RepID=A0A367JD18_RHIAZ)

HSP 1 Score: 154 bits (389), Expect = 1.290e-42
Identity = 76/149 (51.01%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 MGTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSDDPFWGLGRSDEEE 149
            +G +A+S AD  + E  G GVVDCSWARI+EV F +++   DRLLP+L+A NPVNYGKP KL CAEALA   YI GF +   ++LSKF WG +F ++NG LL +Y  C+ S +VVAVQN Y+   + E +ER K      GL  SD ++
Sbjct:  110 VGEKAVSPADRKIVEMYGAGVVDCSWARIDEVPFTKIRGPTDRLLPYLVATNPVNYGKPWKLNCAEALAAIFYITGFPEHGEELLSKFKWGHAFKKVNGGLLSRYAKCKDSTEVVAVQNEYLA--QLEADERSKEASKTEGLDDSDNDD 256          
BLAST of Gchil3877.t1 vs. uniprot
Match: A0A168NCS2_ABSGL (18S rRNA aminocarboxypropyltransferase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168NCS2_ABSGL)

HSP 1 Score: 154 bits (389), Expect = 1.330e-42
Identity = 71/137 (51.82%), Postives = 98/137 (71.53%), Query Frame = 0
Query:    1 MGTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSDD 137
            +G +A+S AD  + E  G GVVDCSWARI+EV F +++  +DRLLP+L+A NPVNYGKP KL CAEALA   Y+ GF D    ++SKF WG +F+++N  LL++Y  C+ S +VVAVQN Y+ + E++  ER+K  D
Sbjct:   79 VGEKAVSPADRSIVEQYGAGVVDCSWARIDEVPFSKIRGPSDRLLPYLVATNPVNYGKPWKLNCAEALAAIFYVTGFPDHGEALMSKFKWGHAFYKVNAGLLNRYAKCKDSTEVVAVQNEYLASLEED--ERRKDKD 213          
BLAST of Gchil3877.t1 vs. uniprot
Match: L8GGJ8_ACACA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGJ8_ACACA)

HSP 1 Score: 153 bits (387), Expect = 1.520e-42
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 0
Query:    1 MGTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIAANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGDLLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSDD 137
            MG R++S  D     + G+ V+DCSWA I+ + F +L+ G  RLLPFL+AANPVNYG+PLKL+CAEA A  LYI GF + A QV+SKF WG SF+++N  LLD+Y  C  S +VV VQN +I  CE+E   +  +DD
Sbjct:   41 MGERSVSAEDREHVIASGVSVIDCSWALIDSIPFSKLRGGFHRLLPFLVAANPVNYGRPLKLSCAEAAAATLYITGFKEEAEQVMSKFKWGHSFFEVNRTLLDRYAACANSAEVVKVQNDWIEECEREQANKHPADD 177          
The following BLAST results are available for this feature:
BLAST of Gchil3877.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q6P0_CHOCR7.250e-5856.7318S rRNA aminocarboxypropyltransferase n=1 Tax=Cho... [more]
A0A6G0WJW4_9STRA1.590e-4651.6318S rRNA aminocarboxypropyltransferase n=1 Tax=Aph... [more]
A0A3R7BIR3_9STRA2.610e-4448.4518S rRNA aminocarboxypropyltransferase n=9 Tax=Aph... [more]
A0A024UTD3_9STRA9.030e-4443.2318S rRNA aminocarboxypropyltransferase n=2 Tax=Aph... [more]
A0A6A4JAE1_APOLU2.930e-4353.7318S rRNA aminocarboxypropyltransferase n=1 Tax=Apo... [more]
A0A1X2IIL5_9FUNG3.850e-4351.4918S rRNA aminocarboxypropyltransferase n=1 Tax=Abs... [more]
A0A485LMC1_9STRA8.050e-4352.6318S rRNA aminocarboxypropyltransferase n=1 Tax=Aph... [more]
A0A367JD18_RHIAZ1.290e-4251.0118S rRNA aminocarboxypropyltransferase n=5 Tax=Rhi... [more]
A0A168NCS2_ABSGL1.330e-4251.8218S rRNA aminocarboxypropyltransferase n=1 Tax=Abs... [more]
L8GGJ8_ACACA1.520e-4252.5518S rRNA aminocarboxypropyltransferase n=1 Tax=Aca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00717716S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminalPFAMPF04034Ribo_biogen_Ccoord: 2..122
e-value: 2.3E-47
score: 159.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..193
IPR02296816S/18S rRNA aminocarboxypropyltransferase Tsr3PANTHERPTHR20426RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOGcoord: 1..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000010_piloncontigtig00000010_pilon:1142634..1143233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3877.t1Gchil3877.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000010_pilon 1142634..1143233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3877.t1 ID=Gchil3877.t1|Name=Gchil3877.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=200bp
MGTRAISKADSVLAESCGLGVVDCSWARIEEVSFDRLKSGADRLLPFLIA
ANPVNYGKPLKLTCAEALAGGLYIMGFADSARQVLSKFVWGDSFWQLNGD
LLDQYRNCEKSEDVVAVQNAYITACEKEVEERKKSDDPFWGLGRSDEEES
ESEDYGGDIESETGNEVCNANVENMLDAMRVNEDGREEPPSDLTVDSDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007177Tsr3_C
IPR022968Tsr3-like