Gchil9123.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil9123.t1
Unique NameGchil9123.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length505
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1947630..1949144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog1906.SFRA_06005
PFAMsPAP2
Max annot lvl201174|Actinobacteria
Evalue8.71e-44
EggNOG OGsCOG2931@1|root,COG2931@2|Bacteria,2GK1B@201174|Actinobacteria
Descriptioncalcium- and calmodulin-responsive adenylate cyclase activity
COG categoryQ
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9123Gchil9123Gracilaria chilensis NLEC103_M9 malegenetig00004370_pilon 1947630..1949144 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9123.t1.stop1Gchil9123.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004370_pilon 1947630..1947632 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9123.t1.CDS1Gchil9123.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004370_pilon 1947630..1949144 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9123.t1.exon1Gchil9123.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004370_pilon 1947630..1949144 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9123.t1.start1Gchil9123.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004370_pilon 1949142..1949144 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9123.t1Gchil9123.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004370_pilon 1947630..1949144 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil9123.t1 ID=Gchil9123.t1|Name=Gchil9123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=505bp
MPLLLLLPLLSALLVPRPVNSARTESLADQLFLNFLPINRAAGALTPPRI
LLGETPVVVRFTLIGGAAIYDARAACQPRALSFFGTNDSVPSAFCQPDNN
AILASYTTYRALRREFPVETELYAQFLRELSLEPASPSLDPSTLNGWANL
AGDRLADFFQKDGWNSLGDRTRQTGRVPFEDFTSYRPANNPYNQPYNLER
PLRWVPSPLDLGNGRLAHQIHVVPQLSKAVNLLVVPESEAATRRVDAPFQ
KPNASEISQIDRRTADTLVNRVLHASANLTPQQRFYARWWDNKLLSTGGI
SAFYETAAQLTPFEVAQQFLGEMLSQHDALVLTWREKRRHDLVRPSILVQ
ILRRNQRFRAFISEEVGFGNVRAEDWRPLVSAQPHSEFPSGSAAICTAAM
EHIEHYVRYKLGFVPSIKIRYKVGSLPFFLAQDTTVAFGSPLQAASNCAQ
SRLWAGVHFPPAIPAGERIGRGVGRTVFEHIKLLGEGRVPNNCTRCASEG
ILGR*
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spliced messenger RNA

>Gchil9123.t1 ID=Gchil9123.t1|Name=Gchil9123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1515bp|location=Sequence derived from alignment at tig00004370_pilon:1947630..1949144- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCTGTTGCTCTTGCTCCCACTGCTGTCCGCGCTGCTCGTGCCGCG
CCCCGTCAACAGCGCGCGCACCGAATCGCTCGCCGACCAGCTTTTTCTAA
ACTTTCTGCCCATCAATCGAGCCGCCGGCGCCCTCACCCCGCCGCGCATT
CTTCTAGGCGAGACGCCCGTCGTTGTGCGCTTCACTCTCATTGGAGGCGC
CGCCATCTACGACGCCCGCGCCGCCTGCCAACCGCGCGCTCTCTCCTTCT
TTGGTACCAACGACTCGGTGCCGTCGGCGTTTTGCCAACCGGACAACAAC
GCCATTTTGGCTTCGTACACCACGTACCGCGCCTTGCGTCGCGAATTTCC
CGTCGAGACCGAGCTGTATGCTCAATTCCTTCGCGAATTGTCGTTGGAGC
CCGCGTCGCCTTCGCTAGATCCTTCCACGCTCAACGGATGGGCCAATCTC
GCCGGCGACCGCCTCGCCGATTTCTTCCAGAAAGACGGCTGGAATTCGCT
GGGCGACCGCACCCGCCAGACGGGCCGCGTCCCATTTGAAGACTTCACGT
CGTACCGCCCGGCCAACAACCCGTATAACCAGCCGTACAACCTTGAGCGC
CCGTTGAGGTGGGTGCCGAGTCCTCTCGACCTGGGCAATGGGCGCCTGGC
GCACCAGATCCACGTCGTGCCGCAGCTGTCCAAGGCCGTCAATCTGCTTG
TCGTGCCCGAGTCCGAGGCTGCCACCCGTCGAGTTGACGCCCCGTTCCAA
AAGCCCAATGCGAGTGAAATCAGCCAAATTGATCGCCGCACGGCCGACAC
GCTTGTCAATCGAGTGTTGCACGCATCGGCCAATCTCACCCCGCAACAGC
GCTTTTACGCAAGATGGTGGGACAACAAGTTGTTGTCAACGGGCGGCATT
TCGGCCTTCTACGAAACTGCGGCGCAACTGACGCCGTTTGAAGTGGCACA
ACAGTTTTTAGGCGAAATGCTGAGTCAACACGATGCGCTCGTGTTGACGT
GGCGCGAAAAGCGCAGGCACGATCTGGTGCGCCCTTCCATTCTGGTGCAA
ATTCTGCGCCGCAACCAACGCTTCAGGGCGTTCATCAGTGAGGAAGTGGG
CTTTGGCAACGTTCGCGCCGAGGACTGGAGACCGCTGGTGAGTGCGCAAC
CGCATTCGGAGTTTCCGTCTGGCAGTGCTGCCATATGTACGGCGGCTATG
GAGCATATTGAACACTACGTGCGCTACAAGCTTGGGTTCGTACCCAGCAT
CAAGATCCGCTACAAGGTGGGTAGCTTACCGTTCTTCCTTGCGCAGGACA
CAACGGTGGCTTTTGGAAGTCCGCTGCAGGCGGCGTCCAATTGCGCACAG
AGTCGACTGTGGGCGGGTGTGCACTTCCCGCCAGCGATCCCGGCAGGCGA
GAGAATCGGACGCGGCGTAGGACGCACTGTGTTTGAGCACATCAAGCTGC
TGGGCGAAGGACGTGTGCCGAATAACTGTACTCGCTGTGCATCGGAAGGC
ATTTTGGGGCGGTAA
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protein sequence of Gchil9123.t1

>Gchil9123.t1 ID=Gchil9123.t1|Name=Gchil9123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=505bp
MPLLLLLPLLSALLVPRPVNSARTESLADQLFLNFLPINRAAGALTPPRI
LLGETPVVVRFTLIGGAAIYDARAACQPRALSFFGTNDSVPSAFCQPDNN
AILASYTTYRALRREFPVETELYAQFLRELSLEPASPSLDPSTLNGWANL
AGDRLADFFQKDGWNSLGDRTRQTGRVPFEDFTSYRPANNPYNQPYNLER
PLRWVPSPLDLGNGRLAHQIHVVPQLSKAVNLLVVPESEAATRRVDAPFQ
KPNASEISQIDRRTADTLVNRVLHASANLTPQQRFYARWWDNKLLSTGGI
SAFYETAAQLTPFEVAQQFLGEMLSQHDALVLTWREKRRHDLVRPSILVQ
ILRRNQRFRAFISEEVGFGNVRAEDWRPLVSAQPHSEFPSGSAAICTAAM
EHIEHYVRYKLGFVPSIKIRYKVGSLPFFLAQDTTVAFGSPLQAASNCAQ
SRLWAGVHFPPAIPAGERIGRGVGRTVFEHIKLLGEGRVPNNCTRCASEG
ILGR*
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mRNA from alignment at tig00004370_pilon:1947630..1949144-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil9123.t1 ID=Gchil9123.t1|Name=Gchil9123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1515bp|location=Sequence derived from alignment at tig00004370_pilon:1947630..1949144- (Gracilaria chilensis NLEC103_M9 male)
ATGCCGCTGTTGCTCTTGCTCCCACTGCTGTCCGCGCTGCTCGTGCCGCG
CCCCGTCAACAGCGCGCGCACCGAATCGCTCGCCGACCAGCTTTTTCTAA
ACTTTCTGCCCATCAATCGAGCCGCCGGCGCCCTCACCCCGCCGCGCATT
CTTCTAGGCGAGACGCCCGTCGTTGTGCGCTTCACTCTCATTGGAGGCGC
CGCCATCTACGACGCCCGCGCCGCCTGCCAACCGCGCGCTCTCTCCTTCT
TTGGTACCAACGACTCGGTGCCGTCGGCGTTTTGCCAACCGGACAACAAC
GCCATTTTGGCTTCGTACACCACGTACCGCGCCTTGCGTCGCGAATTTCC
CGTCGAGACCGAGCTGTATGCTCAATTCCTTCGCGAATTGTCGTTGGAGC
CCGCGTCGCCTTCGCTAGATCCTTCCACGCTCAACGGATGGGCCAATCTC
GCCGGCGACCGCCTCGCCGATTTCTTCCAGAAAGACGGCTGGAATTCGCT
GGGCGACCGCACCCGCCAGACGGGCCGCGTCCCATTTGAAGACTTCACGT
CGTACCGCCCGGCCAACAACCCGTATAACCAGCCGTACAACCTTGAGCGC
CCGTTGAGGTGGGTGCCGAGTCCTCTCGACCTGGGCAATGGGCGCCTGGC
GCACCAGATCCACGTCGTGCCGCAGCTGTCCAAGGCCGTCAATCTGCTTG
TCGTGCCCGAGTCCGAGGCTGCCACCCGTCGAGTTGACGCCCCGTTCCAA
AAGCCCAATGCGAGTGAAATCAGCCAAATTGATCGCCGCACGGCCGACAC
GCTTGTCAATCGAGTGTTGCACGCATCGGCCAATCTCACCCCGCAACAGC
GCTTTTACGCAAGATGGTGGGACAACAAGTTGTTGTCAACGGGCGGCATT
TCGGCCTTCTACGAAACTGCGGCGCAACTGACGCCGTTTGAAGTGGCACA
ACAGTTTTTAGGCGAAATGCTGAGTCAACACGATGCGCTCGTGTTGACGT
GGCGCGAAAAGCGCAGGCACGATCTGGTGCGCCCTTCCATTCTGGTGCAA
ATTCTGCGCCGCAACCAACGCTTCAGGGCGTTCATCAGTGAGGAAGTGGG
CTTTGGCAACGTTCGCGCCGAGGACTGGAGACCGCTGGTGAGTGCGCAAC
CGCATTCGGAGTTTCCGTCTGGCAGTGCTGCCATATGTACGGCGGCTATG
GAGCATATTGAACACTACGTGCGCTACAAGCTTGGGTTCGTACCCAGCAT
CAAGATCCGCTACAAGGTGGGTAGCTTACCGTTCTTCCTTGCGCAGGACA
CAACGGTGGCTTTTGGAAGTCCGCTGCAGGCGGCGTCCAATTGCGCACAG
AGTCGACTGTGGGCGGGTGTGCACTTCCCGCCAGCGATCCCGGCAGGCGA
GAGAATCGGACGCGGCGTAGGACGCACTGTGTTTGAGCACATCAAGCTGC
TGGGCGAAGGACGTGTGCCGAATAACTGTACTCGCTGTGCATCGGAAGGC
ATTTTGGGGCGGTAA
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Coding sequence (CDS) from alignment at tig00004370_pilon:1947630..1949144-

>Gchil9123.t1 ID=Gchil9123.t1|Name=Gchil9123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1515bp|location=Sequence derived from alignment at tig00004370_pilon:1947630..1949144- (Gracilaria chilensis NLEC103_M9 male)
ATGCCGCTGTTGCTCTTGCTCCCACTGCTGTCCGCGCTGCTCGTGCCGCG
CCCCGTCAACAGCGCGCGCACCGAATCGCTCGCCGACCAGCTTTTTCTAA
ACTTTCTGCCCATCAATCGAGCCGCCGGCGCCCTCACCCCGCCGCGCATT
CTTCTAGGCGAGACGCCCGTCGTTGTGCGCTTCACTCTCATTGGAGGCGC
CGCCATCTACGACGCCCGCGCCGCCTGCCAACCGCGCGCTCTCTCCTTCT
TTGGTACCAACGACTCGGTGCCGTCGGCGTTTTGCCAACCGGACAACAAC
GCCATTTTGGCTTCGTACACCACGTACCGCGCCTTGCGTCGCGAATTTCC
CGTCGAGACCGAGCTGTATGCTCAATTCCTTCGCGAATTGTCGTTGGAGC
CCGCGTCGCCTTCGCTAGATCCTTCCACGCTCAACGGATGGGCCAATCTC
GCCGGCGACCGCCTCGCCGATTTCTTCCAGAAAGACGGCTGGAATTCGCT
GGGCGACCGCACCCGCCAGACGGGCCGCGTCCCATTTGAAGACTTCACGT
CGTACCGCCCGGCCAACAACCCGTATAACCAGCCGTACAACCTTGAGCGC
CCGTTGAGGTGGGTGCCGAGTCCTCTCGACCTGGGCAATGGGCGCCTGGC
GCACCAGATCCACGTCGTGCCGCAGCTGTCCAAGGCCGTCAATCTGCTTG
TCGTGCCCGAGTCCGAGGCTGCCACCCGTCGAGTTGACGCCCCGTTCCAA
AAGCCCAATGCGAGTGAAATCAGCCAAATTGATCGCCGCACGGCCGACAC
GCTTGTCAATCGAGTGTTGCACGCATCGGCCAATCTCACCCCGCAACAGC
GCTTTTACGCAAGATGGTGGGACAACAAGTTGTTGTCAACGGGCGGCATT
TCGGCCTTCTACGAAACTGCGGCGCAACTGACGCCGTTTGAAGTGGCACA
ACAGTTTTTAGGCGAAATGCTGAGTCAACACGATGCGCTCGTGTTGACGT
GGCGCGAAAAGCGCAGGCACGATCTGGTGCGCCCTTCCATTCTGGTGCAA
ATTCTGCGCCGCAACCAACGCTTCAGGGCGTTCATCAGTGAGGAAGTGGG
CTTTGGCAACGTTCGCGCCGAGGACTGGAGACCGCTGGTGAGTGCGCAAC
CGCATTCGGAGTTTCCGTCTGGCAGTGCTGCCATATGTACGGCGGCTATG
GAGCATATTGAACACTACGTGCGCTACAAGCTTGGGTTCGTACCCAGCAT
CAAGATCCGCTACAAGGTGGGTAGCTTACCGTTCTTCCTTGCGCAGGACA
CAACGGTGGCTTTTGGAAGTCCGCTGCAGGCGGCGTCCAATTGCGCACAG
AGTCGACTGTGGGCGGGTGTGCACTTCCCGCCAGCGATCCCGGCAGGCGA
GAGAATCGGACGCGGCGTAGGACGCACTGTGTTTGAGCACATCAAGCTGC
TGGGCGAAGGACGTGTGCCGAATAACTGTACTCGCTGTGCATCGGAAGGC
ATTTTGGGGCGGTAA
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