Gchil7484.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil7484.t1 vs. uniprot
Match: A0A2V3J281_9FLOR (DNA-directed RNA polymerases II, IV and V subunit 9A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J281_9FLOR) HSP 1 Score: 210 bits (535), Expect = 9.220e-69 Identity = 100/114 (87.72%), Postives = 103/114 (90.35%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKEDAGEVNYPIHKNVIVHTANEKLAITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVNCGTRWLSSEE 114
MLYPQEDV ERR TGRKVL YVCRNC + ED EV YPIHKNVIVHTANEK+AITYDVLEDKTLPRTFNANCP ECQGKQAVYYQSPVGKNDEALVLIFVCVNCG RWLSS+E
Sbjct: 1 MLYPQEDVKERRSTGRKVLKYVCRNCTYFEDVSEVTYPIHKNVIVHTANEKMAITYDVLEDKTLPRTFNANCP--ECQGKQAVYYQSPVGKNDEALVLIFVCVNCGNRWLSSDE 112
BLAST of Gchil7484.t1 vs. uniprot
Match: A0A7S2ZP66_9RHOD (DNA-directed RNA polymerase subunit n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZP66_9RHOD) HSP 1 Score: 120 bits (301), Expect = 5.750e-33 Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKEDAGEVNYPIHKNVIVHTANEKLAITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVNCGTRWLSSEE 114
MLYP ED A RR T ++ L Y CR+C +KE +++ P++++VI H A+E TYDV D TLPRT+ C + C K+AVY+Q PVGKND+ LVL FVCVNC W SS++
Sbjct: 12 MLYPTEDKALRRSTKQRSLIYSCRSCGNKETVTDLSEPVYRHVIAHQASEVTQETYDVTADPTLPRTYETAC--RNCGHKEAVYFQVPVGKNDDMLVLHFVCVNCRENWFSSDD 123
BLAST of Gchil7484.t1 vs. uniprot
Match: A0A6G0V615_9BILA (DNA-directed RNA polymerase subunit n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V615_9BILA) HSP 1 Score: 79.0 bits (193), Expect = 1.740e-16 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKEDAGEVNYPIHKNVIVHTANEKLAITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVN--CGTRW 109
MLYP+ED R+ L Y CRNC H E A I+ N ++H +E I DV+ D TLP+TF+ CP +CQGK+AV++Q+ + ++ + L +VC N C RW
Sbjct: 32 MLYPREDKDHRQ------LMYTCRNCDHTELADSP--CIYVNKLMHEIDELTQIVADVINDPTLPKTFDHVCP--KCQGKEAVFFQAQSRRAEDEMKLYYVCTNKECVHRW 132
BLAST of Gchil7484.t1 vs. uniprot
Match: A0A7E4UXN3_PANRE (DNA-directed RNA polymerase subunit n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4UXN3_PANRE) HSP 1 Score: 75.5 bits (184), Expect = 3.730e-15 Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKEDAGEVNYPIHKNVIVHTANEKLAITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVN--CGTRW 109
MLYP+ED +R L Y CRNC H E A I+ N ++H +E I DV+ D TLP+T++ CP+ C K+AV++Q+ + +E + L +VC N C RW
Sbjct: 30 MLYPREDKEHQR------LMYTCRNCDHSEQAESP--CIYINKLMHEIDELTQIVADVVNDPTLPKTYDHVCPN--CDLKEAVFFQAQSRRAEEEMKLYYVCTNRECNHRW 130
BLAST of Gchil7484.t1 vs. uniprot
Match: K0THW0_THAOC (TFIIS-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THW0_THAOC) HSP 1 Score: 73.2 bits (178), Expect = 7.870e-14 Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKE-DAGEVNYPIHKNVIVHTANEKL-AITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGK-NDEALVLIFVCVNCGTRWLS 111
MLYP+E+ +ER+ L Y CR C + E AG++ I+KNV+ L + DV +D TLPR+ NA+C +C +AVY+QS E+L LIFVC NCG +W++
Sbjct: 74 MLYPKENPSERK------LVYACRLCRYTEYAAGQL---IYKNVLKKEVGNILHTVPADVSDDPTLPRSQNAHCG--KCGHSEAVYFQSDTSDVRSESLALIFVCCNCGYKWVA 176
BLAST of Gchil7484.t1 vs. uniprot
Match: B7FQG9_PHATC (DNA-directed RNA polymerase subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQG9_PHATC) HSP 1 Score: 68.6 bits (166), Expect = 1.130e-12 Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKEDAGEVNYPIHKNVIVHTANEKLAITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVNCGTRWLS 111
MLYPQED K+L Y CR C + E A + N + + +D TL R+ ANC + C +AV++QS V ++D +L LIFVC NCG +W++
Sbjct: 10 MLYPQEDKRN------KILQYACRLCRYVESAPDQPLIYRNERKKEVGNILHTVPSSISDDPTLARSQKANCAN--CGRHEAVFFQSDVAQSD-SLALIFVCCNCGHKWVN 111
BLAST of Gchil7484.t1 vs. uniprot
Match: A0A0G4GWI1_VITBC (DNA-directed RNA polymerase subunit n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWI1_VITBC) HSP 1 Score: 62.8 bits (151), Expect = 2.380e-10 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCRNCVHKE----DAGEVNYPIHKNVIVHTANEKLAITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVNCGTRWL 110
+L P+ED ERR+ L + C+ C KE D+ N I + I + + E++ I +++ED TL RT + CP +C+ + AV++Q P D+A+ L+FVC NCG W+
Sbjct: 10 LLDPEED-KERRQ-----LVFRCKRCNIKEATDPDSAAEN-TIERRNINYESKEEVFIRREIVEDNTLSRTKDHECP--KCRYRGAVFFQLPEKSTDQAMTLVFVCENCG-HWV 113
BLAST of Gchil7484.t1 vs. uniprot
Match: A0A7S3HGL0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGL0_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.080e-7 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 0
Query: 1 MLYPQEDVAERRRTGRKVLNYVCR--NCVHKEDAGEVNYP---IHKNVIVHTANEKL-AITYDVLEDKTLPRTFNANCPDQECQGKQAVYYQSPVGKNDEALVLIFVCVNCGTRWL 110
+LYP+E+ K L Y C+ +C + E +N P + N I+ ++ +L I DV +D TL R+ + NC C +AV++Q+ AL L+FVC NCG +W+
Sbjct: 11 LLYPREN------RQLKALEYYCKQNDCPYTE----INLPSTCVFVNEIIKDSSTRLEVILSDVNKDPTLQRSRDINCTG--CGFNEAVFFQAEQTTKSTALNLVFVCCNCGHKWM 114 The following BLAST results are available for this feature:
BLAST of Gchil7484.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 8
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil7484.t1 ID=Gchil7484.t1|Name=Gchil7484.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bpback to top |