Gchil9134.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9134.t1
Unique NameGchil9134.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length684
Homology
BLAST of Gchil9134.t1 vs. uniprot
Match: A0A2V3IN54_9FLOR (Aurora kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN54_9FLOR)

HSP 1 Score: 611 bits (1575), Expect = 1.850e-207
Identity = 317/527 (60.15%), Postives = 402/527 (76.28%), Query Frame = 0
Query:    4 VLRGVRDRIWSRRRRR---VLLEEPTNEHHQAGVFRNLSIDLLQKPFHIFPRRKSKEDETPHRLPLPSPPIKQNDDSFSSLPSTHASRDPFLNDDVPVALSRSDIDDRPRKEDGSTKSNVEITSQPASYSSASTLRKRSSLWKRSYDPDADFQSIHERDILKAVSLSEAAVKNDDVRAAQQLALIVTAQIGQLSNVLKEVQDEVQDATKFADTLLHARHACFEGLLDYKIDDDVDKEGDRCLAEMQLTERLWDLEGCMIEKRYEDCVIAIEGLSEVKSRMSSRARTKFLYLRHQLVSELASLCSSSLQAAEAYGKLLRTLDAGHQARCIVLEDMKRELFTELRHASMHSHEAASRYLNGILNRTLTLFRRAHKTYAALSFADDHDSSAFLLWLMEQSDKVYEEFVRSVVAKVSKVEPITILSAIEAAQGGRELTNHSLKTSETSLLSVYQTRVNTLLRRDLHVPMKEAERQLLERAKTLACAIPSNWREGPYQSGTAMCDELSMISRCLGGVLNIESNKEAVVGRML 527
            +LRGVR+++ SRR RR      E    +  Q   FRN+SIDLLQKPF++FPRR+SKE++T  + P    P K+NDDSFSS+PSTHAS+DPFLNDDVPV +SRS+  DRPRKED S KSN E  S PAS+SSAST+RKRSSLWKRSYDP+ADFQS+HERDILKAVSLSEAAVKNDDVR AQQLA IV AQ+ + ++ +++VQ +   A +FA TL  AR + F GLLD K+D D  +E DR L +M+ TE+LWDLE CM+EKRYEDCV A+  L  +  +MS+RA  +F  LR +L+ EL SLC++   AAE Y  LL++L+AG + RC VLEDMKRELF ELRHA+ HSH+AA+ YLN +LN+T+ LFRRA++ Y ALSFA DH+S  FLLW++EQSD+VYEEFVR V++KV K + ITIL  IEAAQ  RE T+  ++  E S++SV+QTRV  L+R D+   ++EAERQL+ERAK LA AIP +WREGPY+SG AMCDELS++ + L GV+ +E  +E V+GR L
Sbjct:    1 MLRGVREKLRSRRSRRHSPPFEEGLIPDDRQPRAFRNISIDLLQKPFNLFPRRRSKEEQTTFQAPPQPAPPKRNDDSFSSIPSTHASKDPFLNDDVPVDISRSENTDRPRKEDDSVKSNAEPGSPPASFSSASTVRKRSSLWKRSYDPEADFQSVHERDILKAVSLSEAAVKNDDVRCAQQLAHIVNAQVDEFTSAVQQVQTDGAQAREFARTLPVARDSRFRGLLDVKMDGDSVREADRSLRDMRCTEQLWDLEACMVEKRYEDCVSAVHKLGGMSDKMSARAEGRFKQLRDELIGELGSLCATMPHAAETYAPLLKSLEAGEEGRCRVLEDMKRELFAELRHAATHSHDAAALYLNMMLNKTVGLFRRANEMYMALSFAGDHNSRGFLLWMVEQSDRVYEEFVRPVLSKVCKADAITILKVIEAAQERREPTDQPMRGGEASVVSVFQTRVKALMRGDMEGAVREAERQLVERAKMLASAIPRSWREGPYESGRAMCDELSVVKKGLEGVVKVEGEREGVIGRPL 527          
BLAST of Gchil9134.t1 vs. uniprot
Match: R7QKU8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKU8_CHOCR)

HSP 1 Score: 192 bits (487), Expect = 2.060e-52
Identity = 93/249 (37.35%), Postives = 166/249 (66.67%), Query Frame = 0
Query:  360 ILNRTLTLFRRAHKTYAALSFADDHDSSAFLLWLMEQSDKVYEEFVRSVVAKVSKVEPITILSAIEAAQGGRELTNHSLKTSETSLLSVYQTRVNTLLRRDLHVPMKEAERQLLERAKTLACAIPSNWREGPYQSGTAMCDELSMISRCL-GGVLNIESNKEAVVGRMLVRPAVTYCATLVEMCAKSVKEETSLSMRDAQEGLIETMNMVGKALLRMGPREARLEVIERAAHALQSRDMGAIDTLSREL 607
            +LNRTL +FR+ +  Y+ +S +   +SS F+ W++EQSD +Y +F+  ++ ++   +P+TIL+ IEAA+  +   + + + +  SL+++ +TR+ T +R++L  P+++AERQL+ERA+  A AIP NW+EGPYQSG A+CDEL++++R L G ++N+ ++ + + G +LVR A+ Y  TL+ +  ++  E +SL+    QEG+ ET +++GK + R+  +  ++  +E  A AL S+D+  I  L  E 
Sbjct:    1 MLNRTLQIFRQTYSVYSRISSSGSQNSSFFVAWVVEQSDNLYSKFISPILLRMRNADPMTILATIEAARHRKLKLDSTAQKNGESLVALLETRITTHIRKELDGPIRDAERQLIERARVYASAIPQNWQEGPYQSGRAICDELNVLARGLEGALMNLGTSTDILTGNLLVRLALEYSTTLLRVATRAASENSSLTTSTVQEGVFETFSLIGKTMQRLHHKYGKIPSLEPVAAALSSQDLREIKLLQAEF 249          
The following BLAST results are available for this feature:
BLAST of Gchil9134.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IN54_9FLOR1.850e-20760.15Aurora kinase n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QKU8_CHOCR2.060e-5237.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 600..620
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..129
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 248..409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1975970..1978021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9134.t1Gchil9134.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1975970..1978021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9134.t1 ID=Gchil9134.t1|Name=Gchil9134.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=684bp
MPSVLRGVRDRIWSRRRRRVLLEEPTNEHHQAGVFRNLSIDLLQKPFHIF
PRRKSKEDETPHRLPLPSPPIKQNDDSFSSLPSTHASRDPFLNDDVPVAL
SRSDIDDRPRKEDGSTKSNVEITSQPASYSSASTLRKRSSLWKRSYDPDA
DFQSIHERDILKAVSLSEAAVKNDDVRAAQQLALIVTAQIGQLSNVLKEV
QDEVQDATKFADTLLHARHACFEGLLDYKIDDDVDKEGDRCLAEMQLTER
LWDLEGCMIEKRYEDCVIAIEGLSEVKSRMSSRARTKFLYLRHQLVSELA
SLCSSSLQAAEAYGKLLRTLDAGHQARCIVLEDMKRELFTELRHASMHSH
EAASRYLNGILNRTLTLFRRAHKTYAALSFADDHDSSAFLLWLMEQSDKV
YEEFVRSVVAKVSKVEPITILSAIEAAQGGRELTNHSLKTSETSLLSVYQ
TRVNTLLRRDLHVPMKEAERQLLERAKTLACAIPSNWREGPYQSGTAMCD
ELSMISRCLGGVLNIESNKEAVVGRMLVRPAVTYCATLVEMCAKSVKEET
SLSMRDAQEGLIETMNMVGKALLRMGPREARLEVIERAAHALQSRDMGAI
DTLSRELKRASSERAAAARRETGEQGEARRGKGPRRDRTTPARYAAVDED
KKDEDDLDEDEDERTLKLQAKVFLAQQRARADR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016159Cullin_repeat-like_dom_sf