Gchil8954.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8954.t1
Unique Name	Gchil8954.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	258

Homology

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BLAST of Gchil8954.t1 vs. uniprot
Match: A0A2V3IM20_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM20_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 4.660e-42
Identity = 137/272 (50.37%), Postives = 156/272 (57.35%), Query Frame = 0

Query:    1 MSERLHYFAEATTPVSFDCDASEIESDLGDL-RRPQTDTDRLNNHTRQLQLWSDEARRRLGASVTQSSPTVQRRVTHSS-------PPPXXXXXXTPDRHQSNLSERARSATSRPVPRSHSAKNLRIRVTPSSSSKSLLSDIESELCAHAAHTASSSAPTSPR--------LRAALAP-PSSQRAPLSQPSQQPHQAASAVVKAPRPQPLP-AALVLSP-TNVEPVSATRRGKLLRHDNXXXXXXXXXXXXXSLSRRQSFYRRIKRFSLRRL 253
            M+ERLHYF EA+TPVSFDCD S+I+SDL DL RRPQ+D+DR   H RQLQLWSDEARRRL      + P  QRR T S        P        + DR QSNLSER+R   S+ V RSHSAKNLRIR+TPSSSSKSLLSDIESE    + H  S  AP SPR        L +A  P P S   P S P     +AA AV K    +P P AA   SP T+  P  +    KL   D               LS R SF RRI+R+SLRRL
Sbjct:    1 MAERLHYFTEASTPVSFDCDDSDIDSDLDDLSRRPQSDSDRAKIHARQLQLWSDEARRRLSGQPPSTPP--QRRSTFSGSLSPNLIPIHLQPTTLSTDRQQSNLSERSRP--SQRVSRSHSAKNLRIRITPSSSSKSLLSDIESE----SGHPLS--APQSPRRNTLTDVRLPSANKPLPPSCVPPTSAPKNP--RAAPAVNKQHNAKPQPSAAHSCSPVTHAAPAYSPPETKL---DANPSDVDEQDHATVRLSTRHSFSRRIRRWSLRRL 257

The following BLAST results are available for this feature:

BLAST of Gchil8954.t1 vs. uniprot

BLAST of Gchil8954.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IM20_9FLOR	4.660e-42	50.37	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..133

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:386100..386873 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8954.t1	Gchil8954.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 386100..386873 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8954.t1 ID=Gchil8954.t1|Name=Gchil8954.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=258bp
MSERLHYFAEATTPVSFDCDASEIESDLGDLRRPQTDTDRLNNHTRQLQL
WSDEARRRLGASVTQSSPTVQRRVTHSSPPPPPPTPPTPDRHQSNLSERA
RSATSRPVPRSHSAKNLRIRVTPSSSSKSLLSDIESELCAHAAHTASSSA
PTSPRLRAALAPPSSQRAPLSQPSQQPHQAASAVVKAPRPQPLPAALVLS
PTNVEPVSATRRGKLLRHDNDDDDDDDDSDADASLSRRQSFYRRIKRFSL
RRLLRRS*